You are here

Home

ATCC64974_44630-T1, ATCC64974_44630-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_44630-T1
Unique NameATCC64974_44630-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:425730..426759+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_44630-T1 ID=ATCC64974_44630-T1|Name=ATCC64974_44630-T1|organism=Aspergillus niger N402|type=mRNA|length=1030bp|location=Sequence derived from alignment at OGUI01000007.1:425730..426759+ (Aspergillus niger N402)
ATGGACCTGCGCAATGAGCCGCTCTGGCAGTGGCCTTCTAGCTCTGCCTC
CGTCTCAGCCTCGGACCCTGACTTTGATGTAAGGCAGAGTCCGGAAGATG
TTGCTGGACCTGATGGCTCTTCGCAACCTTCAGGCGAGACTTTCGAAAAG
CATTACCCTCCTCGTACATGTCGCATTTGCCTGGAGACCGTCTACCCTAC
TTTCCCTCCTCCATCCGAACACCTGCCTGGGTTTCTTCAGTCCAAGCAAC
GCGTGACATACCAGTCCTCAGACCCGGAGTCTGGTCGATTGCTTCGCCCT
TGCAAATGCAAAGGATCCTCGCGTTATGTGCATGAGGGATGTTTACAACT
TTGGCGACACGCGGACCCAGGTTATGGCAAGAGGAATTATTGGCACTGTC
CGACTTGTGGTTTCCACTATCGCTTAGAGCGCCTCCGGTGGGCACACTGG
ATCAGTAGCCCATTGACGCAGCTTGGACTCACCCTAATAATTCTAATGTT
GACTGTATTTTTACTTGGTTTTATTGCTGACCCGATCATTAATTTATACG
TGGACCCTATGGACCCCATTATCCGCTCGGACTACTGGGATACGCGTCCT
GTGGCGAGTATCTTACCTGACAACGAAGAGGCTTCCTGGACTGAGCACTT
CATCAAGGGGCTAGCCTCTTTGGGATTTCTGTCTTTCATCAAGGCCGTGT
TTGCGCTTTCTTCATGGCACGGATTGACACTGCGCGGCACAGGGATGTTT
GGTGGCGGAAGGAATTCTGGCCGCAACCGGGTCGCGTGGCTTGTCATCGT
CATCGGTGTTGGTAGTTTTCTTTGGGTATGTTCACAACCTATAATTCTTT
TATTTATTGGCAACTTCTGACCGCAAATATTAGGCTGTTTACAAAGGTGT
AAGAACATGGAGCTGCAGGGCTTTAGAAAAAGCCGGACAGCGAGTCATGG
ATGTTCCGTTGCCTGATGACGAGGATGAAGATGATAAAGCCTCCGCGGAA
AAGTCCGATGAAAGTAAGAAGGAAGATTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:425730..426759+

>ATCC64974_44630-T1 ID=ATCC64974_44630-T1|Name=ATCC64974_44630-T1|organism=Aspergillus niger N402|type=CDS|length=1944bp|location=Sequence derived from alignment at OGUI01000007.1:425730..426759+ (Aspergillus niger N402)
ATGGACCTGCGCAATGAGCCGCTCTGGCAGTGGCCTTCTAGCTCTGCCTC
CGTCTCAGCCTCGGACCCTGACTTTGATGTAAGGCAGAGTCCGGAAGATG
TTGCTGGACCTGATGGCTCTTCGCAACCTTCAGGCGAGACTTTCGAAAAG
CATTACCCTCCTCGTACATGTCGCATTTGCCTGGAGACCGTCTACCCTAC
TTTCCCTCCTCCATCCGAACACCTGCCTGGGTTTCTTCAGTCCAAGCAAC
GCGTGACATACCAGTCCTCAGACCCGGAGTCTGGTCGATTGCTTCGCCCT
TGCAAATGCAAAGGATCCTCGCGTTATGTGCATGAGGGATGTTTACAACT
TTGGCGACACGCGGACCCAGGTTATGGCAAGAGGAATTATTGGCACTGTC
CGACTTGTGGTTTCCACTATCGCTTAGAGCGCCTCCGGTGGGCACACTGG
ATCAGTAGCCCATTGACGCAGCTTGGACTCACCCTAATAATTCTAATGTT
GACTGTATTTTTACTTGGTTTTATTGCTGACCCGATCATTAATTTATACG
TGGACCCTATGGACCCCATTATCCGCTCGGACTACTGGGATACGCGTCCT
GTGGCGAGTATCTTACCTGACAACGAAGAGGCTTCCTGGACTGAGCACTT
CATCAAGGGGCTAGCCTCTTTGGGATTTCTGTCTTTCATCAAGGCCGTGT
TTGCGCTTTCTTCATGGCACGGATTGACACTGCGCGGCACAGGGATGTTT
GGTGGCGGAAGGAATTCTGGCCGCAACCGGGTCGCGTGGCTTGTCATCGT
CATCGGTGTTGGTAGTTTTCTTTGGGCTGTTTACAAAGGTGTAAGAACAT
GGAGCTGCAGGGCTTTAGAAAAAGCCGGACAGCGAGTCATGGATGTTCCG
TTGCCTGATGACGAGGATGAAGATGATAAAGCCTCCGCGGAAAAGTCCGA
TGAAAGTAAGAAGGAAGATTGAATGGACCTGCGCAATGAGCCGCTCTGGC
AGTGGCCTTCTAGCTCTGCCTCCGTCTCAGCCTCGGACCCTGACTTTGAT
GTAAGGCAGAGTCCGGAAGATGTTGCTGGACCTGATGGCTCTTCGCAACC
TTCAGGCGAGACTTTCGAAAAGCATTACCCTCCTCGTACATGTCGCATTT
GCCTGGAGACCGTCTACCCTACTTTCCCTCCTCCATCCGAACACCTGCCT
GGGTTTCTTCAGTCCAAGCAACGCGTGACATACCAGTCCTCAGACCCGGA
GTCTGGTCGATTGCTTCGCCCTTGCAAATGCAAAGGATCCTCGCGTTATG
TGCATGAGGGATGTTTACAACTTTGGCGACACGCGGACCCAGGTTATGGC
AAGAGGAATTATTGGCACTGTCCGACTTGTGGTTTCCACTATCGCTTAGA
GCGCCTCCGGTGGGCACACTGGATCAGTAGCCCATTGACGCAGCTTGGAC
TCACCCTAATAATTCTAATGTTGACTGTATTTTTACTTGGTTTTATTGCT
GACCCGATCATTAATTTATACGTGGACCCTATGGACCCCATTATCCGCTC
GGACTACTGGGATACGCGTCCTGTGGCGAGTATCTTACCTGACAACGAAG
AGGCTTCCTGGACTGAGCACTTCATCAAGGGGCTAGCCTCTTTGGGATTT
CTGTCTTTCATCAAGGCCGTGTTTGCGCTTTCTTCATGGCACGGATTGAC
ACTGCGCGGCACAGGGATGTTTGGTGGCGGAAGGAATTCTGGCCGCAACC
GGGTCGCGTGGCTTGTCATCGTCATCGGTGTTGGTAGTTTTCTTTGGGCT
GTTTACAAAGGTGTAAGAACATGGAGCTGCAGGGCTTTAGAAAAAGCCGG
ACAGCGAGTCATGGATGTTCCGTTGCCTGATGACGAGGATGAAGATGATA
AAGCCTCCGCGGAAAAGTCCGATGAAAGTAAGAAGGAAGATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_44630ATCC64974_44630Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_44630-T1.exon1ATCC64974_44630-T1.exon1Aspergillus niger N402exon
ATCC64974_44630-T1.exon2ATCC64974_44630-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_44630-T1.cdsATCC64974_44630-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_44630-T1ATCC64974_44630-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR011016
DBxrefPFAM:PF12906
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:425730..426759 +
Powered by Drupal