You are here

Home

ATCC64974_46520-T1, ATCC64974_46520-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_46520-T1
Unique NameATCC64974_46520-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1072407..1073952-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_46520-T1 ID=ATCC64974_46520-T1|Name=ATCC64974_46520-T1|organism=Aspergillus niger N402|type=mRNA|length=1546bp|location=Sequence derived from alignment at OGUI01000007.1:1072407..1073952- (Aspergillus niger N402)
ATGGCGCGCCCAGATAGGCGCGTCAATCTAGCGGTTGCCAGGGCTATTCC
GCCATTTCTATTGTGTGTATGTGTATATGCATGCTATATTGTCACAAAGC
CGTTATGCAGTAAGTGCCCCCTGAGCCAATGGCTTACTTCCGCCGCTAAT
TGTCCGAATTAGTTGACTACCTGATCCGCCCTCTCCCAAAATATTCCCAC
GGCCGTCGAGTTGGCGCTGGCATAGCCATTCTCGTTATCTTCTACATTCT
CATTCTTGTCGTTATTATAACCTATCTCCGGCTGTTGTTCAATATCACCC
GCAACCCTGGCTTCTTACCCCGTGCTCCCGCACCGACGAAGGAAGAGCAA
GAGACGGAACCATCGGACCGCCCTCCACGCAGGAAGAGAAAGCACAGAAG
GACACGGACAGCCGAGAAGCCGGATAAGACGGACGTTGATATTGAAAGAG
GTGCAGACGGCAACGCCGACAGTGGTGCAATTCCTTTGGATATTATTGGC
TTGGAGAGTTTCTATACAAAAGATGTTTTTGTTTGCCAAGAGGATGGGAG
ACCACTTTATTGCTCGACATGTTCTCGCTACAAGCCTGATAGAGCACATC
ACTGTCGAGAGGTAGACAGGTGTGTGCTTAAGATGGACCACTTTTGTCCT
TGGTGAGTTCCTCTTCCTCAGTGATCACTGGACCGGACTGTCATTAACAT
TTGATCAGGGTAGGAGGCGTGGTTTCCGAAACATCATTCAAATTCTTTAT
ACAATTCGTGTTTTATACTCTGATATTTTGCGCATTCAGTTTGATAATAT
GCGCAACCTTCACGGCAGAGATTATTCAAGATGTGAGAAAATGTCTTTCA
AGCTCTCTGGTCTGTAGACTAACCGTTTTCTTTTGCATAGGCTGGCGGAG
CCAATGTTCATCTGGCTATCGGTATTGGATTGTAAGTATTTTCAACGTAT
GCTTCAGGTTTACCGATCGCCTTCTAACGATCAGTAGGAGCTCCCTGTTC
GGTCTTTTCTCCTTCGGGATGACTATCAGTTCCTTACAGCTTGCGATGTG
GAATCTGTCAACGATTGAGAACCTGAATCGTCGGTCTGCAGTATGGACTC
TGGCCATCCGCGTGCCAGATCGTATGCTGGCAAGGCTCAACCCCGAGTCA
CGATGGGCACCCACTTTCCGCACCATAACGTACCCACTTCCACCTGTGCC
TCTCTCCCCTGAGGCGGCGAGAGATTACCAGCCACCAGAGAAGCAGCATG
TCTTTGCCATTCTCCAAACCCTGCCTGGCGAGAATCCTTTCGACCTCGGC
AGTCGCTTTAAGAACCTCCAACAGGTCCTGGGGTATTCCATCATCGACTG
GTTTCTACCTCTCAGACAAAGTCCATGTGCAGACCGCACTACAAGAGACA
GCTTCTACGAACTAGGACCGGTAGTGTCCCGCCTGAAAAAGGAGGCCGGA
TTAGACCCTCCACCCGAATCGCAGCCCACAACACAGAATGACACAGAAAG
AAAACATAAGCGAAGACGAAGTTCGCATAGACGATCGCAAGGGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:1072407..1073952-

>ATCC64974_46520-T1 ID=ATCC64974_46520-T1|Name=ATCC64974_46520-T1|organism=Aspergillus niger N402|type=CDS|length=6615bp|location=Sequence derived from alignment at OGUI01000007.1:1072407..1073952- (Aspergillus niger N402)
GAGCTCCCTGTTCGGTCTTTTCTCCTTCGGGATGACTATCAGTTCCTTAC
AGCTTGCGATGTGGAATCTGTCAACGATTGAGAACCTGAATCGTCGGTCT
GCAGTATGGACTCTGGCCATCCGCGTGCCAGATCGTATGCTGGCAAGGCT
CAACCCCGAGTCACGATGGGCACCCACTTTCCGCACCATAACGTACCCAC
TTCCACCTGTGCCTCTCTCCCCTGAGGCGGCGAGAGATTACCAGCCACCA
GAGAAGCAGCATGTCTTTGCCATTCTCCAAACCCTGCCTGGCGAGAATCC
TTTCGACCTCGGCAGTCGCTTTAAGAACCTCCAACAGGTCCTGGGGTATT
CCATCATCGACTGGTTTCTACCTCTCAGACAAAGTCCATGTGCAGACCGC
ACTACAAGAGACAGCTTCTACGAACTAGGACCGGTAGTGTCCCGCCTGAA
AAAGGAGGCCGGATTAGACCCTCCACCCGAATCGCAGCCCACAACACAGA
ATGACACAGAAAGAAAACATAAGCGAAGACGAAGTTCGCATAGACGATCG
CAAGGGTGAGCTGGCGGAGCCAATGTTCATCTGGCTATCGGTATTGGATT
GGTAGGAGGCGTGGTTTCCGAAACATCATTCAAATTCTTTATACAATTCG
TGTTTTATACTCTGATATTTTGCGCATTCAGTTTGATAATATGCGCAACC
TTCACGGCAGAGATTATTCAAGATTTGACTACCTGATCCGCCCTCTCCCA
AAATATTCCCACGGCCGTCGAGTTGGCGCTGGCATAGCCATTCTCGTTAT
CTTCTACATTCTCATTCTTGTCGTTATTATAACCTATCTCCGGCTGTTGT
TCAATATCACCCGCAACCCTGGCTTCTTACCCCGTGCTCCCGCACCGACG
AAGGAAGAGCAAGAGACGGAACCATCGGACCGCCCTCCACGCAGGAAGAG
AAAGCACAGAAGGACACGGACAGCCGAGAAGCCGGATAAGACGGACGTTG
ATATTGAAAGAGGTGCAGACGGCAACGCCGACAGTGGTGCAATTCCTTTG
GATATTATTGGCTTGGAGAGTTTCTATACAAAAGATGTTTTTGTTTGCCA
AGAGGATGGGAGACCACTTTATTGCTCGACATGTTCTCGCTACAAGCCTG
ATAGAGCACATCACTGTCGAGAGGTAGACAGGTGTGTGCTTAAGATGGAC
CACTTTTGTCCTTGATGGCGCGCCCAGATAGGCGCGTCAATCTAGCGGTT
GCCAGGGCTATTCCGCCATTTCTATTGTGTGTATGTGTATATGCATGCTA
TATTGTCACAAAGCCGTTATGCAGAGCTCCCTGTTCGGTCTTTTCTCCTT
CGGGATGACTATCAGTTCCTTACAGCTTGCGATGTGGAATCTGTCAACGA
TTGAGAACCTGAATCGTCGGTCTGCAGTATGGACTCTGGCCATCCGCGTG
CCAGATCGTATGCTGGCAAGGCTCAACCCCGAGTCACGATGGGCACCCAC
TTTCCGCACCATAACGTACCCACTTCCACCTGTGCCTCTCTCCCCTGAGG
CGGCGAGAGATTACCAGCCACCAGAGAAGCAGCATGTCTTTGCCATTCTC
CAAACCCTGCCTGGCGAGAATCCTTTCGACCTCGGCAGTCGCTTTAAGAA
CCTCCAACAGGTCCTGGGGTATTCCATCATCGACTGGTTTCTACCTCTCA
GACAAAGTCCATGTGCAGACCGCACTACAAGAGACAGCTTCTACGAACTA
GGACCGGTAGTGTCCCGCCTGAAAAAGGAGGCCGGATTAGACCCTCCACC
CGAATCGCAGCCCACAACACAGAATGACACAGAAAGAAAACATAAGCGAA
GACGAAGTTCGCATAGACGATCGCAAGGGTGAGCTGGCGGAGCCAATGTT
CATCTGGCTATCGGTATTGGATTGGTAGGAGGCGTGGTTTCCGAAACATC
ATTCAAATTCTTTATACAATTCGTGTTTTATACTCTGATATTTTGCGCAT
TCAGTTTGATAATATGCGCAACCTTCACGGCAGAGATTATTCAAGATTTG
ACTACCTGATCCGCCCTCTCCCAAAATATTCCCACGGCCGTCGAGTTGGC
GCTGGCATAGCCATTCTCGTTATCTTCTACATTCTCATTCTTGTCGTTAT
TATAACCTATCTCCGGCTGTTGTTCAATATCACCCGCAACCCTGGCTTCT
TACCCCGTGCTCCCGCACCGACGAAGGAAGAGCAAGAGACGGAACCATCG
GACCGCCCTCCACGCAGGAAGAGAAAGCACAGAAGGACACGGACAGCCGA
GAAGCCGGATAAGACGGACGTTGATATTGAAAGAGGTGCAGACGGCAACG
CCGACAGTGGTGCAATTCCTTTGGATATTATTGGCTTGGAGAGTTTCTAT
ACAAAAGATGTTTTTGTTTGCCAAGAGGATGGGAGACCACTTTATTGCTC
GACATGTTCTCGCTACAAGCCTGATAGAGCACATCACTGTCGAGAGGTAG
ACAGGTGTGTGCTTAAGATGGACCACTTTTGTCCTTGATGGCGCGCCCAG
ATAGGCGCGTCAATCTAGCGGTTGCCAGGGCTATTCCGCCATTTCTATTG
TGTGTATGTGTATATGCATGCTATATTGTCACAAAGCCGTTATGCAGAGC
TCCCTGTTCGGTCTTTTCTCCTTCGGGATGACTATCAGTTCCTTACAGCT
TGCGATGTGGAATCTGTCAACGATTGAGAACCTGAATCGTCGGTCTGCAG
TATGGACTCTGGCCATCCGCGTGCCAGATCGTATGCTGGCAAGGCTCAAC
CCCGAGTCACGATGGGCACCCACTTTCCGCACCATAACGTACCCACTTCC
ACCTGTGCCTCTCTCCCCTGAGGCGGCGAGAGATTACCAGCCACCAGAGA
AGCAGCATGTCTTTGCCATTCTCCAAACCCTGCCTGGCGAGAATCCTTTC
GACCTCGGCAGTCGCTTTAAGAACCTCCAACAGGTCCTGGGGTATTCCAT
CATCGACTGGTTTCTACCTCTCAGACAAAGTCCATGTGCAGACCGCACTA
CAAGAGACAGCTTCTACGAACTAGGACCGGTAGTGTCCCGCCTGAAAAAG
GAGGCCGGATTAGACCCTCCACCCGAATCGCAGCCCACAACACAGAATGA
CACAGAAAGAAAACATAAGCGAAGACGAAGTTCGCATAGACGATCGCAAG
GGTGAGCTGGCGGAGCCAATGTTCATCTGGCTATCGGTATTGGATTGGTA
GGAGGCGTGGTTTCCGAAACATCATTCAAATTCTTTATACAATTCGTGTT
TTATACTCTGATATTTTGCGCATTCAGTTTGATAATATGCGCAACCTTCA
CGGCAGAGATTATTCAAGATTTGACTACCTGATCCGCCCTCTCCCAAAAT
ATTCCCACGGCCGTCGAGTTGGCGCTGGCATAGCCATTCTCGTTATCTTC
TACATTCTCATTCTTGTCGTTATTATAACCTATCTCCGGCTGTTGTTCAA
TATCACCCGCAACCCTGGCTTCTTACCCCGTGCTCCCGCACCGACGAAGG
AAGAGCAAGAGACGGAACCATCGGACCGCCCTCCACGCAGGAAGAGAAAG
CACAGAAGGACACGGACAGCCGAGAAGCCGGATAAGACGGACGTTGATAT
TGAAAGAGGTGCAGACGGCAACGCCGACAGTGGTGCAATTCCTTTGGATA
TTATTGGCTTGGAGAGTTTCTATACAAAAGATGTTTTTGTTTGCCAAGAG
GATGGGAGACCACTTTATTGCTCGACATGTTCTCGCTACAAGCCTGATAG
AGCACATCACTGTCGAGAGGTAGACAGGTGTGTGCTTAAGATGGACCACT
TTTGTCCTTGATGGCGCGCCCAGATAGGCGCGTCAATCTAGCGGTTGCCA
GGGCTATTCCGCCATTTCTATTGTGTGTATGTGTATATGCATGCTATATT
GTCACAAAGCCGTTATGCAGAGCTCCCTGTTCGGTCTTTTCTCCTTCGGG
ATGACTATCAGTTCCTTACAGCTTGCGATGTGGAATCTGTCAACGATTGA
GAACCTGAATCGTCGGTCTGCAGTATGGACTCTGGCCATCCGCGTGCCAG
ATCGTATGCTGGCAAGGCTCAACCCCGAGTCACGATGGGCACCCACTTTC
CGCACCATAACGTACCCACTTCCACCTGTGCCTCTCTCCCCTGAGGCGGC
GAGAGATTACCAGCCACCAGAGAAGCAGCATGTCTTTGCCATTCTCCAAA
CCCTGCCTGGCGAGAATCCTTTCGACCTCGGCAGTCGCTTTAAGAACCTC
CAACAGGTCCTGGGGTATTCCATCATCGACTGGTTTCTACCTCTCAGACA
AAGTCCATGTGCAGACCGCACTACAAGAGACAGCTTCTACGAACTAGGAC
CGGTAGTGTCCCGCCTGAAAAAGGAGGCCGGATTAGACCCTCCACCCGAA
TCGCAGCCCACAACACAGAATGACACAGAAAGAAAACATAAGCGAAGACG
AAGTTCGCATAGACGATCGCAAGGGTGAGCTGGCGGAGCCAATGTTCATC
TGGCTATCGGTATTGGATTGGTAGGAGGCGTGGTTTCCGAAACATCATTC
AAATTCTTTATACAATTCGTGTTTTATACTCTGATATTTTGCGCATTCAG
TTTGATAATATGCGCAACCTTCACGGCAGAGATTATTCAAGATTTGACTA
CCTGATCCGCCCTCTCCCAAAATATTCCCACGGCCGTCGAGTTGGCGCTG
GCATAGCCATTCTCGTTATCTTCTACATTCTCATTCTTGTCGTTATTATA
ACCTATCTCCGGCTGTTGTTCAATATCACCCGCAACCCTGGCTTCTTACC
CCGTGCTCCCGCACCGACGAAGGAAGAGCAAGAGACGGAACCATCGGACC
GCCCTCCACGCAGGAAGAGAAAGCACAGAAGGACACGGACAGCCGAGAAG
CCGGATAAGACGGACGTTGATATTGAAAGAGGTGCAGACGGCAACGCCGA
CAGTGGTGCAATTCCTTTGGATATTATTGGCTTGGAGAGTTTCTATACAA
AAGATGTTTTTGTTTGCCAAGAGGATGGGAGACCACTTTATTGCTCGACA
TGTTCTCGCTACAAGCCTGATAGAGCACATCACTGTCGAGAGGTAGACAG
GTGTGTGCTTAAGATGGACCACTTTTGTCCTTGATGGCGCGCCCAGATAG
GCGCGTCAATCTAGCGGTTGCCAGGGCTATTCCGCCATTTCTATTGTGTG
TATGTGTATATGCATGCTATATTGTCACAAAGCCGTTATGCAGAGCTCCC
TGTTCGGTCTTTTCTCCTTCGGGATGACTATCAGTTCCTTACAGCTTGCG
ATGTGGAATCTGTCAACGATTGAGAACCTGAATCGTCGGTCTGCAGTATG
GACTCTGGCCATCCGCGTGCCAGATCGTATGCTGGCAAGGCTCAACCCCG
AGTCACGATGGGCACCCACTTTCCGCACCATAACGTACCCACTTCCACCT
GTGCCTCTCTCCCCTGAGGCGGCGAGAGATTACCAGCCACCAGAGAAGCA
GCATGTCTTTGCCATTCTCCAAACCCTGCCTGGCGAGAATCCTTTCGACC
TCGGCAGTCGCTTTAAGAACCTCCAACAGGTCCTGGGGTATTCCATCATC
GACTGGTTTCTACCTCTCAGACAAAGTCCATGTGCAGACCGCACTACAAG
AGACAGCTTCTACGAACTAGGACCGGTAGTGTCCCGCCTGAAAAAGGAGG
CCGGATTAGACCCTCCACCCGAATCGCAGCCCACAACACAGAATGACACA
GAAAGAAAACATAAGCGAAGACGAAGTTCGCATAGACGATCGCAAGGGTG
AGCTGGCGGAGCCAATGTTCATCTGGCTATCGGTATTGGATTGGTAGGAG
GCGTGGTTTCCGAAACATCATTCAAATTCTTTATACAATTCGTGTTTTAT
ACTCTGATATTTTGCGCATTCAGTTTGATAATATGCGCAACCTTCACGGC
AGAGATTATTCAAGATTTGACTACCTGATCCGCCCTCTCCCAAAATATTC
CCACGGCCGTCGAGTTGGCGCTGGCATAGCCATTCTCGTTATCTTCTACA
TTCTCATTCTTGTCGTTATTATAACCTATCTCCGGCTGTTGTTCAATATC
ACCCGCAACCCTGGCTTCTTACCCCGTGCTCCCGCACCGACGAAGGAAGA
GCAAGAGACGGAACCATCGGACCGCCCTCCACGCAGGAAGAGAAAGCACA
GAAGGACACGGACAGCCGAGAAGCCGGATAAGACGGACGTTGATATTGAA
AGAGGTGCAGACGGCAACGCCGACAGTGGTGCAATTCCTTTGGATATTAT
TGGCTTGGAGAGTTTCTATACAAAAGATGTTTTTGTTTGCCAAGAGGATG
GGAGACCACTTTATTGCTCGACATGTTCTCGCTACAAGCCTGATAGAGCA
CATCACTGTCGAGAGGTAGACAGGTGTGTGCTTAAGATGGACCACTTTTG
TCCTTGATGGCGCGCCCAGATAGGCGCGTCAATCTAGCGGTTGCCAGGGC
TATTCCGCCATTTCTATTGTGTGTATGTGTATATGCATGCTATATTGTCA
CAAAGCCGTTATGCA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016409palmitoyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PFA5ATCC64974_46520Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_46520-T1ATCC64974_46520-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_46520-T1.cdsATCC64974_46520-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_46520-T1.exon5ATCC64974_46520-T1.exon5Aspergillus niger N402exon
ATCC64974_46520-T1.exon4ATCC64974_46520-T1.exon4Aspergillus niger N402exon
ATCC64974_46520-T1.exon3ATCC64974_46520-T1.exon3Aspergillus niger N402exon
ATCC64974_46520-T1.exon2ATCC64974_46520-T1.exon2Aspergillus niger N402exon
ATCC64974_46520-T1.exon1ATCC64974_46520-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR001594
DBxrefPFAM:PF01529
Productpalmitoyltransferase pfa5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1072407..1073952 -
Powered by Drupal