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ATCC64974_4680-T1, ATCC64974_4680-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_4680-T1
Unique NameATCC64974_4680-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1426371..1428896+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_4680-T1 ID=ATCC64974_4680-T1|Name=ATCC64974_4680-T1|organism=Aspergillus niger N402|type=mRNA|length=2526bp|location=Sequence derived from alignment at OGUI01000001.1:1426371..1428896+ (Aspergillus niger N402)
ATGAGAGGTTTGAATCTCTTTCAATTAATACTGGCTCTTCTGCTGTCCAT
GGTAGCAGCCGAGGATGGGTACGATGGCTGGCTCCGATATGCTCCCGTGT
CCTGCGATCTGCGTTGTCGACAGGCTTTACCGTCTCATGTTGTGTTGTTG
AACAGCACCAAAGGAAGCCCAATCGAGACCGCCGGACGAGAATTGAAAGC
GGGATTCCAATCGATTCTTTCGACGAACTTGACATCTCGTCCATTTCAAT
GCAATAGCTCCACATCAATTCTGGTGGCTACTCTGGATGAGTACCGCCAA
AGATGCCGGGACATTAATGTGCCTGAGCTCGATCCCGATGGCTTCTGGTT
ACAATCCGAAGGGGACACAGTTCGGATCTTAGGCAAGGATGCCAGAGGAG
CCTTGTACGGAGCATACGAATATCTAGCTATGGTGGCACAGCGAAATTTT
TCTCGTGTCGCGTATGCCACGAGCCCACATGCGCCGATCCGTTGGGTGAA
TCAATGGGACAACATGGACGGAAGCATTGAACGAGGATACGGTGGTGCGT
CGATATTCTTCAAAGATGGCACGGTGGTGGAAGACATGGCTCCTGTTGAG
CAATATGCTAGACTGCTTGCATCCATCCGGATAAATGCAATTGTCGTCAA
TAATGTCAATGCGAACGCGACATTACTGCTACCCGAGAATATGAAAGGCC
TGGGTCGTATAGCAGATGCATGTCGACCATACGGCGTTCAAATTGGCATA
TCGCTGAACTTTGCTTCACCCGAAGACTTGGGTGGTTTGAATACTTATGA
TCCACTCGATCCAGGTGTCATTGCATGGTGGCAGAATATCACTGATAGTC
TCTATACCTATGTACCAGACATGGCTGGGTACCTCGTCAAAGCCGACTCA
GAGGGCCAGCCAGGTCCAGATACATACAATCGCACACTCTCACAAGGGGC
AAATCTGTTCGCTCGTGCCCTGCAACCGTATGGGGGTGTGCTTATGTACC
GTGCTTTCGTCTATGATGACAACTTGAACGAATCAGACTGGAAGGCTGAT
CGTGCTAAGGCAGCAGTGGAGTATTTCAAGGACCTGGACGGTCAATTCGA
GGAGAACGTCGTGATCCAAATAAAGTACGGCCCGATCGACTTCCAAGTGC
GCGAGCCTACCTCACCACTTTTTGCCAACCTCTACCACACCAACACAGCC
ATAGAGTTGGAGGTTAGTCAGGAGTACCTGGGGCAGCAATGCCATTTGGT
GTACTTACCTCCGCTCTGGAAGACGGTCCTGGATTTCGACTTACGCGTAG
ACCACAAGCCATCGATGGTCCGCGATATCATATCCGGTCAGCGCTTCAAC
AGAACGCTCGGAGGCTGGGCAGCTGTCGTTAATGTGGGCACCAACAGAAC
ATGGCTGGGTAGCCACCTTGCTATGTCCAATCTGTACGCTTACGGTCGTT
TGGCGTGGAGTCCGACAGACGAATCTGAGCAGATCCTCGAAGACTGGACT
CGCCTCACATTTGGACAAAATCACCATGTCATTAACACTATCTCCGATAT
GTCAATGACCTCCTGGCCTGCCTATGAAAACTATACCGGCAACCTGGGCA
TACAGACACTGACAGACATCTTGTATACCCACTATGGTCCAAATCCAGCT
ACACAGGATAACAATGGCTGGGGTCAATGGACACGTGCTGATCATGATTC
TGTCGGTATGGATCGCACAATACGGAACGGCACCGGCTATACCGGTCAAT
ACCCGGAGGAGGTTGCTCGCGTATACGAATCACTAGAAAGCACGCCAGAT
GACCTAGTATTGTGGTTTCACCATGTACCATGGACGCACCGTCTGCACTC
CGGAGTGACTGTTATCCAGCATTTCTACAACGCTCACTATGCGGGCGCAG
AAGCTGCACACGGATTCGTCAGACAATGGGAGTCTTTGGAAGGGCTCATT
GACCGGGAGCGATACGAAGCCATGCGGTCGCGACTGGTCTACCAGGCGGG
ACACTCCATTGTCTGGCGAGATGCTATCAATAATTTCTACTACAACATGA
CCGGAATCCCAGATGTGGCTGGACGTGTGGGTCACCATCCGTGGCGCATT
GAAGCCGAGAGTATGAGATTAGATGGATACCAGACGTATACGGTCAGTCC
GTTCGAGGCTGCTTCTAATACTACAGCAATTATTACCACTTCTAATTCAA
CGACTGGGACGGCGAGGACTAGCATCAAGGCCCCATCAGGAGTATACGAC
ATTGGGGTGAACTACTACGATCTCTATGGTGGTCAATCGAAGTGGACACT
ATCTGTGGGTGATAAGGTAGTGGGCCAATGGCTTGGGGATATGGAGCATA
ATTCCCTAGGCCATACACCATCTATATACTTAGATGGTCACTCTGCCACT
CGGATTACGTTCCATGGGGTTGGCATTCGGCAGGGTGATCAGCTGAAGAT
TGTTGGGGAGGCGAATGGGGTCGAGCCCGCTCCCCTGGATTATATAGTGC
TACTGCCCCCAGGCTTAGTTGACTGA
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Coding sequence (CDS) from alignment at OGUI01000001.1:1426371..1428896+

>ATCC64974_4680-T1 ID=ATCC64974_4680-T1|Name=ATCC64974_4680-T1|organism=Aspergillus niger N402|type=CDS|length=2526bp|location=Sequence derived from alignment at OGUI01000001.1:1426371..1428896+ (Aspergillus niger N402)
ATGAGAGGTTTGAATCTCTTTCAATTAATACTGGCTCTTCTGCTGTCCAT
GGTAGCAGCCGAGGATGGGTACGATGGCTGGCTCCGATATGCTCCCGTGT
CCTGCGATCTGCGTTGTCGACAGGCTTTACCGTCTCATGTTGTGTTGTTG
AACAGCACCAAAGGAAGCCCAATCGAGACCGCCGGACGAGAATTGAAAGC
GGGATTCCAATCGATTCTTTCGACGAACTTGACATCTCGTCCATTTCAAT
GCAATAGCTCCACATCAATTCTGGTGGCTACTCTGGATGAGTACCGCCAA
AGATGCCGGGACATTAATGTGCCTGAGCTCGATCCCGATGGCTTCTGGTT
ACAATCCGAAGGGGACACAGTTCGGATCTTAGGCAAGGATGCCAGAGGAG
CCTTGTACGGAGCATACGAATATCTAGCTATGGTGGCACAGCGAAATTTT
TCTCGTGTCGCGTATGCCACGAGCCCACATGCGCCGATCCGTTGGGTGAA
TCAATGGGACAACATGGACGGAAGCATTGAACGAGGATACGGTGGTGCGT
CGATATTCTTCAAAGATGGCACGGTGGTGGAAGACATGGCTCCTGTTGAG
CAATATGCTAGACTGCTTGCATCCATCCGGATAAATGCAATTGTCGTCAA
TAATGTCAATGCGAACGCGACATTACTGCTACCCGAGAATATGAAAGGCC
TGGGTCGTATAGCAGATGCATGTCGACCATACGGCGTTCAAATTGGCATA
TCGCTGAACTTTGCTTCACCCGAAGACTTGGGTGGTTTGAATACTTATGA
TCCACTCGATCCAGGTGTCATTGCATGGTGGCAGAATATCACTGATAGTC
TCTATACCTATGTACCAGACATGGCTGGGTACCTCGTCAAAGCCGACTCA
GAGGGCCAGCCAGGTCCAGATACATACAATCGCACACTCTCACAAGGGGC
AAATCTGTTCGCTCGTGCCCTGCAACCGTATGGGGGTGTGCTTATGTACC
GTGCTTTCGTCTATGATGACAACTTGAACGAATCAGACTGGAAGGCTGAT
CGTGCTAAGGCAGCAGTGGAGTATTTCAAGGACCTGGACGGTCAATTCGA
GGAGAACGTCGTGATCCAAATAAAGTACGGCCCGATCGACTTCCAAGTGC
GCGAGCCTACCTCACCACTTTTTGCCAACCTCTACCACACCAACACAGCC
ATAGAGTTGGAGGTTAGTCAGGAGTACCTGGGGCAGCAATGCCATTTGGT
GTACTTACCTCCGCTCTGGAAGACGGTCCTGGATTTCGACTTACGCGTAG
ACCACAAGCCATCGATGGTCCGCGATATCATATCCGGTCAGCGCTTCAAC
AGAACGCTCGGAGGCTGGGCAGCTGTCGTTAATGTGGGCACCAACAGAAC
ATGGCTGGGTAGCCACCTTGCTATGTCCAATCTGTACGCTTACGGTCGTT
TGGCGTGGAGTCCGACAGACGAATCTGAGCAGATCCTCGAAGACTGGACT
CGCCTCACATTTGGACAAAATCACCATGTCATTAACACTATCTCCGATAT
GTCAATGACCTCCTGGCCTGCCTATGAAAACTATACCGGCAACCTGGGCA
TACAGACACTGACAGACATCTTGTATACCCACTATGGTCCAAATCCAGCT
ACACAGGATAACAATGGCTGGGGTCAATGGACACGTGCTGATCATGATTC
TGTCGGTATGGATCGCACAATACGGAACGGCACCGGCTATACCGGTCAAT
ACCCGGAGGAGGTTGCTCGCGTATACGAATCACTAGAAAGCACGCCAGAT
GACCTAGTATTGTGGTTTCACCATGTACCATGGACGCACCGTCTGCACTC
CGGAGTGACTGTTATCCAGCATTTCTACAACGCTCACTATGCGGGCGCAG
AAGCTGCACACGGATTCGTCAGACAATGGGAGTCTTTGGAAGGGCTCATT
GACCGGGAGCGATACGAAGCCATGCGGTCGCGACTGGTCTACCAGGCGGG
ACACTCCATTGTCTGGCGAGATGCTATCAATAATTTCTACTACAACATGA
CCGGAATCCCAGATGTGGCTGGACGTGTGGGTCACCATCCGTGGCGCATT
GAAGCCGAGAGTATGAGATTAGATGGATACCAGACGTATACGGTCAGTCC
GTTCGAGGCTGCTTCTAATACTACAGCAATTATTACCACTTCTAATTCAA
CGACTGGGACGGCGAGGACTAGCATCAAGGCCCCATCAGGAGTATACGAC
ATTGGGGTGAACTACTACGATCTCTATGGTGGTCAATCGAAGTGGACACT
ATCTGTGGGTGATAAGGTAGTGGGCCAATGGCTTGGGGATATGGAGCATA
ATTCCCTAGGCCATACACCATCTATATACTTAGATGGTCACTCTGCCACT
CGGATTACGTTCCATGGGGTTGGCATTCGGCAGGGTGATCAGCTGAAGAT
TGTTGGGGAGGCGAATGGGGTCGAGCCCGCTCCCCTGGATTATATAGTGC
TACTGCCCCCAGGCTTAGTTGACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0045493xylan catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0046559alpha-glucuronidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_4680ATCC64974_4680Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4680-T1.exon1ATCC64974_4680-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4680-T1.cdsATCC64974_4680-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4680-T1ATCC64974_4680-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
NoteCAZy:GH67
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR011099
DBxrefInterPro:IPR037054
DBxrefInterPro:IPR011100
DBxrefInterPro:IPR011395
DBxrefInterPro:IPR005154
DBxrefInterPro:IPR029018
DBxrefPFAM:PF03648
DBxrefPFAM:PF07488
DBxrefPFAM:PF07477
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1426371..1428896 +
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