You are here

Home

ATCC64974_47370-T1, ATCC64974_47370-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_47370-T1
Unique NameATCC64974_47370-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:1317603..1319050+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_47370-T1 ID=ATCC64974_47370-T1|Name=ATCC64974_47370-T1|organism=Aspergillus niger N402|type=mRNA|length=1448bp|location=Sequence derived from alignment at OGUI01000007.1:1317603..1319050+ (Aspergillus niger N402)
ATGGCCGAGTCTCAGCGTACGTTCGATTCTTCGAAAGCGGGGGAAGCAGC
CTCAACAGCAGATTACTGATTGCGCTTAACTCACAGGCCGCCCCCGTGTT
TTCTTCGACATCCAGATCGGTAAACAGCAGACCGGTCGCATTGCTCTTGA
ACTGGTATGTCTACTTCCTACCTGTCCAACATTTGCCTGTTGTGCTTGAT
CCAGTCTCGCTAACTACCCCGCCTATGCAGTTCAACGATGGTACCGTGCA
GACTCTCCCGTAGAGGAATTACGCGCATATTCCTAACCATGGGCAAATAG
TCGTTCCCAAGACCGCGGAGAATTTCCGGGCTCTGTGCACTGGCGAAAAG
GGCATGGGCAAGCAGGGCAAGCCATTGCACTTCAAAGGTACGGCGATCCA
ATCCGGCAGCCTCAATTTTTCCTTCCCCTCCCCCGCTCCGGCGGGGCCGT
GTACACGAAAACTACACGAAAACACCAGAACATCGCTAAACTGCAGTCTC
TGAATAGGCTCCATTTTCCACCGTGTCATCAAGCAGTTCATGATCCAGGG
TGGTGACTTCACCGCGTTCAACGGCACGGGCGGCGAGTCGATCTATGGAG
AGAAATTCCCCGACGAGAACTTCGACCTTAAGCATGACCGCCCCTTCCTT
CTCTCCATGGCCAACTCCGGCCCCGGCACCAACGGCAGTCAGTTCTTCAT
CACAACCGTGCCCACCCCCCACCTGGATGGCAAGCACGTTGTCTTCGGTG
AGGTGATCAACGGCAAGAGCGTTGTCCGCAAGGTCGAGAACATGTCGACC
CAGGCCGACAAGCCCACCACCGATGTCACTATCGTCGACTGCGGAGAGCT
CACCGGTGACGAGTACGAAAACGCTGATAAGCAGATTCCCGATGCGACTG
GCGATCCTTATGAGGACTTCCCCGATGACCACCAGGGCGAGGAGCTGAGC
GCCCCTGTCTGCTTCAAGATCGCTTCTGAGCTCAAGAACTTCGGCAACAC
CGCTTTCAAGAGCGGAAATCTGACCCTCGGTCTCGAGAAGTACCAGAAGG
GTTTGCGTTATCTCAACGAGTTCCCCGAGCCCGACGAGCAGGACCCCAAG
GATCTGGACCCCCAGATGAAGGCCCTCCGCTTCACTCTGCACTCGAACTC
ATCTCTGCTTGCTAACAAGCTTGGCCAGTTCAAGAACGGCCAGACCTGGG
CTACTTATGCTCTCGAAACAGCTGCTGCTGCGAACGCCAAGGATGCCGAC
AAGGCCAAGGCTTACTACCGCCGCGCGGTGGCCTACAGCGGTCTGAAGGA
GGAGGACGAGGCTCTCAAGGATCTCCAGGAGGCTTCTCAGCTGGCTCCTG
GTGATGCTGGCATTACCAACGAGATTGCCCGGGTCAAGAAGGCCGTCAAG
GACCGCCAGGCTCGCGAGAGGGCTACCGCTCAGAAGTTCTTCTCGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:1317603..1319050+

>ATCC64974_47370-T1 ID=ATCC64974_47370-T1|Name=ATCC64974_47370-T1|organism=Aspergillus niger N402|type=CDS|length=5610bp|location=Sequence derived from alignment at OGUI01000007.1:1317603..1319050+ (Aspergillus niger N402)
ATGGCCGAGTCTCAGCGCCGCCCCCGTGTTTTCTTCGACATCCAGATCGG
TAAACAGCAGACCGGTCGCATTGCTCTTGAACTGTTCAACGATGTCGTTC
CCAAGACCGCGGAGAATTTCCGGGCTCTGTGCACTGGCGAAAAGGGCATG
GGCAAGCAGGGCAAGCCATTGCACTTCAAAGGCTCCATTTTCCACCGTGT
CATCAAGCAGTTCATGATCCAGGGTGGTGACTTCACCGCGTTCAACGGCA
CGGGCGGCGAGTCGATCTATGGAGAGAAATTCCCCGACGAGAACTTCGAC
CTTAAGCATGACCGCCCCTTCCTTCTCTCCATGGCCAACTCCGGCCCCGG
CACCAACGGCAGTCAGTTCTTCATCACAACCGTGCCCACCCCCCACCTGG
ATGGCAAGCACGTTGTCTTCGGTGAGGTGATCAACGGCAAGAGCGTTGTC
CGCAAGGTCGAGAACATGTCGACCCAGGCCGACAAGCCCACCACCGATGT
CACTATCGTCGACTGCGGAGAGCTCACCGGTGACGAGTACGAAAACGCTG
ATAAGCAGATTCCCGATGCGACTGGCGATCCTTATGAGGACTTCCCCGAT
GACCACCAGGGCGAGGAGCTGAGCGCCCCTGTCTGCTTCAAGATCGCTTC
TGAGCTCAAGAACTTCGGCAACACCGCTTTCAAGAGCGGAAATCTGACCC
TCGGTCTCGAGAAGTACCAGAAGGGTTTGCGTTATCTCAACGAGTTCCCC
GAGCCCGACGAGCAGGACCCCAAGGATCTGGACCCCCAGATGAAGGCCCT
CCGCTTCACTCTGCACTCGAACTCATCTCTGCTTGCTAACAAGCTTGGCC
AGTTCAAGAACGGCCAGACCTGGGCTACTTATGCTCTCGAAACAGCTGCT
GCTGCGAACGCCAAGGATGCCGACAAGGCCAAGGCTTACTACCGCCGCGC
GGTGGCCTACAGCGGTCTGAAGGAGGAGGACGAGGCTCTCAAGGATCTCC
AGGAGGCTTCTCAGCTGGCTCCTGGTGATGCTGGCATTACCAACGAGATT
GCCCGGGTCAAGAAGGCCGTCAAGGACCGCCAGGCTCGCGAGAGGGCTAC
CGCTCAGAAGTTCTTCTCGTGAATGGCCGAGTCTCAGCGCCGCCCCCGTG
TTTTCTTCGACATCCAGATCGGTAAACAGCAGACCGGTCGCATTGCTCTT
GAACTGTTCAACGATGTCGTTCCCAAGACCGCGGAGAATTTCCGGGCTCT
GTGCACTGGCGAAAAGGGCATGGGCAAGCAGGGCAAGCCATTGCACTTCA
AAGGCTCCATTTTCCACCGTGTCATCAAGCAGTTCATGATCCAGGGTGGT
GACTTCACCGCGTTCAACGGCACGGGCGGCGAGTCGATCTATGGAGAGAA
ATTCCCCGACGAGAACTTCGACCTTAAGCATGACCGCCCCTTCCTTCTCT
CCATGGCCAACTCCGGCCCCGGCACCAACGGCAGTCAGTTCTTCATCACA
ACCGTGCCCACCCCCCACCTGGATGGCAAGCACGTTGTCTTCGGTGAGGT
GATCAACGGCAAGAGCGTTGTCCGCAAGGTCGAGAACATGTCGACCCAGG
CCGACAAGCCCACCACCGATGTCACTATCGTCGACTGCGGAGAGCTCACC
GGTGACGAGTACGAAAACGCTGATAAGCAGATTCCCGATGCGACTGGCGA
TCCTTATGAGGACTTCCCCGATGACCACCAGGGCGAGGAGCTGAGCGCCC
CTGTCTGCTTCAAGATCGCTTCTGAGCTCAAGAACTTCGGCAACACCGCT
TTCAAGAGCGGAAATCTGACCCTCGGTCTCGAGAAGTACCAGAAGGGTTT
GCGTTATCTCAACGAGTTCCCCGAGCCCGACGAGCAGGACCCCAAGGATC
TGGACCCCCAGATGAAGGCCCTCCGCTTCACTCTGCACTCGAACTCATCT
CTGCTTGCTAACAAGCTTGGCCAGTTCAAGAACGGCCAGACCTGGGCTAC
TTATGCTCTCGAAACAGCTGCTGCTGCGAACGCCAAGGATGCCGACAAGG
CCAAGGCTTACTACCGCCGCGCGGTGGCCTACAGCGGTCTGAAGGAGGAG
GACGAGGCTCTCAAGGATCTCCAGGAGGCTTCTCAGCTGGCTCCTGGTGA
TGCTGGCATTACCAACGAGATTGCCCGGGTCAAGAAGGCCGTCAAGGACC
GCCAGGCTCGCGAGAGGGCTACCGCTCAGAAGTTCTTCTCGTGAATGGCC
GAGTCTCAGCGCCGCCCCCGTGTTTTCTTCGACATCCAGATCGGTAAACA
GCAGACCGGTCGCATTGCTCTTGAACTGTTCAACGATGTCGTTCCCAAGA
CCGCGGAGAATTTCCGGGCTCTGTGCACTGGCGAAAAGGGCATGGGCAAG
CAGGGCAAGCCATTGCACTTCAAAGGCTCCATTTTCCACCGTGTCATCAA
GCAGTTCATGATCCAGGGTGGTGACTTCACCGCGTTCAACGGCACGGGCG
GCGAGTCGATCTATGGAGAGAAATTCCCCGACGAGAACTTCGACCTTAAG
CATGACCGCCCCTTCCTTCTCTCCATGGCCAACTCCGGCCCCGGCACCAA
CGGCAGTCAGTTCTTCATCACAACCGTGCCCACCCCCCACCTGGATGGCA
AGCACGTTGTCTTCGGTGAGGTGATCAACGGCAAGAGCGTTGTCCGCAAG
GTCGAGAACATGTCGACCCAGGCCGACAAGCCCACCACCGATGTCACTAT
CGTCGACTGCGGAGAGCTCACCGGTGACGAGTACGAAAACGCTGATAAGC
AGATTCCCGATGCGACTGGCGATCCTTATGAGGACTTCCCCGATGACCAC
CAGGGCGAGGAGCTGAGCGCCCCTGTCTGCTTCAAGATCGCTTCTGAGCT
CAAGAACTTCGGCAACACCGCTTTCAAGAGCGGAAATCTGACCCTCGGTC
TCGAGAAGTACCAGAAGGGTTTGCGTTATCTCAACGAGTTCCCCGAGCCC
GACGAGCAGGACCCCAAGGATCTGGACCCCCAGATGAAGGCCCTCCGCTT
CACTCTGCACTCGAACTCATCTCTGCTTGCTAACAAGCTTGGCCAGTTCA
AGAACGGCCAGACCTGGGCTACTTATGCTCTCGAAACAGCTGCTGCTGCG
AACGCCAAGGATGCCGACAAGGCCAAGGCTTACTACCGCCGCGCGGTGGC
CTACAGCGGTCTGAAGGAGGAGGACGAGGCTCTCAAGGATCTCCAGGAGG
CTTCTCAGCTGGCTCCTGGTGATGCTGGCATTACCAACGAGATTGCCCGG
GTCAAGAAGGCCGTCAAGGACCGCCAGGCTCGCGAGAGGGCTACCGCTCA
GAAGTTCTTCTCGTGAATGGCCGAGTCTCAGCGCCGCCCCCGTGTTTTCT
TCGACATCCAGATCGGTAAACAGCAGACCGGTCGCATTGCTCTTGAACTG
TTCAACGATGTCGTTCCCAAGACCGCGGAGAATTTCCGGGCTCTGTGCAC
TGGCGAAAAGGGCATGGGCAAGCAGGGCAAGCCATTGCACTTCAAAGGCT
CCATTTTCCACCGTGTCATCAAGCAGTTCATGATCCAGGGTGGTGACTTC
ACCGCGTTCAACGGCACGGGCGGCGAGTCGATCTATGGAGAGAAATTCCC
CGACGAGAACTTCGACCTTAAGCATGACCGCCCCTTCCTTCTCTCCATGG
CCAACTCCGGCCCCGGCACCAACGGCAGTCAGTTCTTCATCACAACCGTG
CCCACCCCCCACCTGGATGGCAAGCACGTTGTCTTCGGTGAGGTGATCAA
CGGCAAGAGCGTTGTCCGCAAGGTCGAGAACATGTCGACCCAGGCCGACA
AGCCCACCACCGATGTCACTATCGTCGACTGCGGAGAGCTCACCGGTGAC
GAGTACGAAAACGCTGATAAGCAGATTCCCGATGCGACTGGCGATCCTTA
TGAGGACTTCCCCGATGACCACCAGGGCGAGGAGCTGAGCGCCCCTGTCT
GCTTCAAGATCGCTTCTGAGCTCAAGAACTTCGGCAACACCGCTTTCAAG
AGCGGAAATCTGACCCTCGGTCTCGAGAAGTACCAGAAGGGTTTGCGTTA
TCTCAACGAGTTCCCCGAGCCCGACGAGCAGGACCCCAAGGATCTGGACC
CCCAGATGAAGGCCCTCCGCTTCACTCTGCACTCGAACTCATCTCTGCTT
GCTAACAAGCTTGGCCAGTTCAAGAACGGCCAGACCTGGGCTACTTATGC
TCTCGAAACAGCTGCTGCTGCGAACGCCAAGGATGCCGACAAGGCCAAGG
CTTACTACCGCCGCGCGGTGGCCTACAGCGGTCTGAAGGAGGAGGACGAG
GCTCTCAAGGATCTCCAGGAGGCTTCTCAGCTGGCTCCTGGTGATGCTGG
CATTACCAACGAGATTGCCCGGGTCAAGAAGGCCGTCAAGGACCGCCAGG
CTCGCGAGAGGGCTACCGCTCAGAAGTTCTTCTCGTGAATGGCCGAGTCT
CAGCGCCGCCCCCGTGTTTTCTTCGACATCCAGATCGGTAAACAGCAGAC
CGGTCGCATTGCTCTTGAACTGTTCAACGATGTCGTTCCCAAGACCGCGG
AGAATTTCCGGGCTCTGTGCACTGGCGAAAAGGGCATGGGCAAGCAGGGC
AAGCCATTGCACTTCAAAGGCTCCATTTTCCACCGTGTCATCAAGCAGTT
CATGATCCAGGGTGGTGACTTCACCGCGTTCAACGGCACGGGCGGCGAGT
CGATCTATGGAGAGAAATTCCCCGACGAGAACTTCGACCTTAAGCATGAC
CGCCCCTTCCTTCTCTCCATGGCCAACTCCGGCCCCGGCACCAACGGCAG
TCAGTTCTTCATCACAACCGTGCCCACCCCCCACCTGGATGGCAAGCACG
TTGTCTTCGGTGAGGTGATCAACGGCAAGAGCGTTGTCCGCAAGGTCGAG
AACATGTCGACCCAGGCCGACAAGCCCACCACCGATGTCACTATCGTCGA
CTGCGGAGAGCTCACCGGTGACGAGTACGAAAACGCTGATAAGCAGATTC
CCGATGCGACTGGCGATCCTTATGAGGACTTCCCCGATGACCACCAGGGC
GAGGAGCTGAGCGCCCCTGTCTGCTTCAAGATCGCTTCTGAGCTCAAGAA
CTTCGGCAACACCGCTTTCAAGAGCGGAAATCTGACCCTCGGTCTCGAGA
AGTACCAGAAGGGTTTGCGTTATCTCAACGAGTTCCCCGAGCCCGACGAG
CAGGACCCCAAGGATCTGGACCCCCAGATGAAGGCCCTCCGCTTCACTCT
GCACTCGAACTCATCTCTGCTTGCTAACAAGCTTGGCCAGTTCAAGAACG
GCCAGACCTGGGCTACTTATGCTCTCGAAACAGCTGCTGCTGCGAACGCC
AAGGATGCCGACAAGGCCAAGGCTTACTACCGCCGCGCGGTGGCCTACAG
CGGTCTGAAGGAGGAGGACGAGGCTCTCAAGGATCTCCAGGAGGCTTCTC
AGCTGGCTCCTGGTGATGCTGGCATTACCAACGAGATTGCCCGGGTCAAG
AAGGCCGTCAAGGACCGCCAGGCTCGCGAGAGGGCTACCGCTCAGAAGTT
CTTCTCGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003755peptidyl-prolyl cis-trans isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CPR6ATCC64974_47370Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47370-T1ATCC64974_47370-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47370-T1.exon1ATCC64974_47370-T1.exon1Aspergillus niger N402exon
ATCC64974_47370-T1.exon2ATCC64974_47370-T1.exon2Aspergillus niger N402exon
ATCC64974_47370-T1.exon3ATCC64974_47370-T1.exon3Aspergillus niger N402exon
ATCC64974_47370-T1.exon4ATCC64974_47370-T1.exon4Aspergillus niger N402exon
ATCC64974_47370-T1.exon5ATCC64974_47370-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_47370-T1.cdsATCC64974_47370-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR020892
DBxrefInterPro:IPR029000
DBxrefInterPro:IPR013105
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019734
DBxrefInterPro:IPR002130
DBxrefPFAM:PF07719
DBxrefPFAM:PF00160
Productpeptidyl-prolyl cis-trans isomerase cpr6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:1317603..1319050 +
Powered by Drupal