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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000007.1:1891969..1892853+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_49160-T1 ID=ATCC64974_49160-T1|Name=ATCC64974_49160-T1|organism=Aspergillus niger N402|type=mRNA|length=885bp|location=Sequence derived from alignment at OGUI01000007.1:1891969..1892853+ (Aspergillus niger N402)
ATGGCCTACGACCCCCGACTGTCCAGTGCAGGCACTGCGACCGCTCCCTC
CCCTCCACCACCACCCCCACCACCCCCAGAAGCCATGGGATCAACAACTC
AACCTCAACCCACCACGACGAACGAGGACAAAAACACAGTGCCAGAATCG
GAGTCCTCATCATCCTCATCATATAAACTCCGATTCTGCACCGTGTGCGC
CTCCAATCAGAACCGCTCTATGGAAGCCCACCTCCGTCTCTCCACAGCGA
CGAGTCCCTTCCCTGTAATTTCCTTCGGGACGGGCTCTCTAGTCCGGTTG
CCCGGGCCCTCAATCACCCAACCCAACGTCTACAACTTCAACACAACCTC
GTACTCTCAAATGTACGACGAGCTGCTCTCCAAAGACGAGCGTCTCTACC
GCAACAACGGCCTCCTGAACATGCTCGAGCGCAACCGTAACTTGAAATGG
GGCCCGGAGCGCTTCCAGGACTGGGTACCGGGACAGCCGCGCGTCGAGCA
CGTCTCGAAGGGCGATAAGGGCGCCCTAGGTACTGAAGGCGGCGTTGTCG
ATGTAATCATCACCTGTGAAGAACGGTGCTGGGATGCCGTGGTAGACGAT
CTTATGAATAAGGGCTCACCCTTGAACCGGCCCGTGCATGTCTTCAACGT
GGATATCAAGGATAATCACGAAGAGGCATTAGTAGGAGGCAAGGCTATCT
TGGATCTAGCGAATCGGTTAAACGAGGCTGCCTCGCAGGAGAGAAAGACG
AATGGTGCCGATGGATGGGAGAACGGAGTCGGTGAGGCGAGACGGAATTT
CGATGCTCGCGTGCCTGATATCCTGGCTGAGTGGCAGGAGAGATGGCCTC
ATTTGCCGGCTTTGTGGACACTGGCTTGGCTATAG back to topCoding sequence (CDS) from alignment at OGUI01000007.1:1891969..1892853+ >ATCC64974_49160-T1 ID=ATCC64974_49160-T1|Name=ATCC64974_49160-T1|organism=Aspergillus niger N402|type=CDS|length=885bp|location=Sequence derived from alignment at OGUI01000007.1:1891969..1892853+ (Aspergillus niger N402)
ATGGCCTACGACCCCCGACTGTCCAGTGCAGGCACTGCGACCGCTCCCTC
CCCTCCACCACCACCCCCACCACCCCCAGAAGCCATGGGATCAACAACTC
AACCTCAACCCACCACGACGAACGAGGACAAAAACACAGTGCCAGAATCG
GAGTCCTCATCATCCTCATCATATAAACTCCGATTCTGCACCGTGTGCGC
CTCCAATCAGAACCGCTCTATGGAAGCCCACCTCCGTCTCTCCACAGCGA
CGAGTCCCTTCCCTGTAATTTCCTTCGGGACGGGCTCTCTAGTCCGGTTG
CCCGGGCCCTCAATCACCCAACCCAACGTCTACAACTTCAACACAACCTC
GTACTCTCAAATGTACGACGAGCTGCTCTCCAAAGACGAGCGTCTCTACC
GCAACAACGGCCTCCTGAACATGCTCGAGCGCAACCGTAACTTGAAATGG
GGCCCGGAGCGCTTCCAGGACTGGGTACCGGGACAGCCGCGCGTCGAGCA
CGTCTCGAAGGGCGATAAGGGCGCCCTAGGTACTGAAGGCGGCGTTGTCG
ATGTAATCATCACCTGTGAAGAACGGTGCTGGGATGCCGTGGTAGACGAT
CTTATGAATAAGGGCTCACCCTTGAACCGGCCCGTGCATGTCTTCAACGT
GGATATCAAGGATAATCACGAAGAGGCATTAGTAGGAGGCAAGGCTATCT
TGGATCTAGCGAATCGGTTAAACGAGGCTGCCTCGCAGGAGAGAAAGACG
AATGGTGCCGATGGATGGGAGAACGGAGTCGGTGAGGCGAGACGGAATTT
CGATGCTCGCGTGCCTGATATCCTGGCTGAGTGGCAGGAGAGATGGCCTC
ATTTGCCGGCTTTGTGGACACTGGCTTGGCTATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006397 | mRNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004721 | phosphoprotein phosphatase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_49160-T1 | ATCC64974_49160-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264JW6 |
| DBxref | InterPro:IPR006811 |
| DBxref | PFAM:PF04722 |
| Product | RNA polymerase II subunit A C-terminal domain phosphatase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000007.1 | supercontig | OGUI01000007.1:1891969..1892853 + |
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