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ATCC64974_50110-T1, ATCC64974_50110-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_50110-T1
Unique NameATCC64974_50110-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:2242121..2243084-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_50110-T1 ID=ATCC64974_50110-T1|Name=ATCC64974_50110-T1|organism=Aspergillus niger N402|type=mRNA|length=964bp|location=Sequence derived from alignment at OGUI01000007.1:2242121..2243084- (Aspergillus niger N402)
ATGGCCGTTCCTGACGCAGACGTTCACCCCGAAGCTACCGGTGCAGCCAA
AGCGCTGGTTGACCGACACCAAGCTGAGCAACCATTAAAGCTGTATGCCG
GCTGGTTCTGTCCGTGAGTTACAACCCCCTCCCCCCCTTCAAAGTGCACT
TTTTGGAATCTTCTACTAATGCCTCCGCAGCTTCGGTATACTTCCCACCC
CTCATATCTTCTCACTACTCCATTCATAATCGACTAATCAATCTCCAGTC
CAACGTGTCTGGCTTGTTCTCGAAGAGAAACAAATTCCCTACCAGTACAT
CGAAATAAACCCCTACCACAAAGAACCCTCCTTCCTCGCTCTGAACCCAC
GAGGCCTCGTCCCCACTATCTCCGTCCCCGACCCCTCAACCAACACCTCC
AAGCCTCTCTACGAATCCACCGTCATCCTCGAATACCTCGAAGAAGCATA
CCCAAACCACCGACCTCTCCTCCCTTCTGACCCGTACCAGCGCGCCCGTT
CCCGCATCTGGATCGACTACGTCACCTCGCGCATTATCCCCACCCTGCAC
CGCTTCCTCCAGTACCAGCCCTCGACGCGCGGAATTGAGGGCCTGCACCA
AGCCCGTCAGGAGTTCCTCTCCACCTTGAAGGAATGGGCTAAGGAGATCG
ACTCCTCGGGGCCGTATTTCTGGGGCTCGGAGGTGTCGCTTCCGGATTTG
GTGCTCGCGCCGTGGGCGTTCCGACTTTGGGTGTTTGATGAGTTTAAGGG
TGGATTAGGGATCCCGAAGCCCGGAGAGGGGGGGGAGGATGAGGAGGTTT
GGGGCAAATGGAGAAAGTGGCAGGAGGCTGTTGAGGGACGGCGGAGCGCG
AAGGAGACGACGAGTGAGGCGGAGCATTATCTGCCCATCTATAAGAGGTA
TGCGGATGATAAGGCGCAGAGTTGGTTGGCAAGAGCAACGAGAGAGGGTA
AGGGGGTCCCATGA
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Coding sequence (CDS) from alignment at OGUI01000007.1:2242121..2243084-

>ATCC64974_50110-T1 ID=ATCC64974_50110-T1|Name=ATCC64974_50110-T1|organism=Aspergillus niger N402|type=CDS|length=1650bp|location=Sequence derived from alignment at OGUI01000007.1:2242121..2243084- (Aspergillus niger N402)
TCCAACGTGTCTGGCTTGTTCTCGAAGAGAAACAAATTCCCTACCAGTAC
ATCGAAATAAACCCCTACCACAAAGAACCCTCCTTCCTCGCTCTGAACCC
ACGAGGCCTCGTCCCCACTATCTCCGTCCCCGACCCCTCAACCAACACCT
CCAAGCCTCTCTACGAATCCACCGTCATCCTCGAATACCTCGAAGAAGCA
TACCCAAACCACCGACCTCTCCTCCCTTCTGACCCGTACCAGCGCGCCCG
TTCCCGCATCTGGATCGACTACGTCACCTCGCGCATTATCCCCACCCTGC
ACCGCTTCCTCCAGTACCAGCCCTCGACGCGCGGAATTGAGGGCCTGCAC
CAAGCCCGTCAGGAGTTCCTCTCCACCTTGAAGGAATGGGCTAAGGAGAT
CGACTCCTCGGGGCCGTATTTCTGGGGCTCGGAGGTGTCGCTTCCGGATT
TGGTGCTCGCGCCGTGGGCGTTCCGACTTTGGGTGTTTGATGAGTTTAAG
GGTGGATTAGGGATCCCGAAGCCCGGAGAGGGGGGGGAGGATGAGGAGGT
TTGGGGCAAATGGAGAAAGTGGCAGGAGGCTGTTGAGGGACGGCGGAGCG
CGAAGGAGACGACGAGTGAGGCGGAGCATTATCTGCCCATCTATAAGAGG
TATGCGGATGATAAGGCGCAGAGTTGGTTGGCAAGAGCAACGAGAGAGGG
TAAGGGGGTCCCATGAATGGCCGTTCCTGACGCAGACGTTCACCCCGAAG
CTACCGGTGCAGCCAAAGCGCTGGTTGACCGACACCAAGCTGAGCAACCA
TTAAAGCTGTATGCCGGCTGGTTCTTCCAACGTGTCTGGCTTGTTCTCGA
AGAGAAACAAATTCCCTACCAGTACATCGAAATAAACCCCTACCACAAAG
AACCCTCCTTCCTCGCTCTGAACCCACGAGGCCTCGTCCCCACTATCTCC
GTCCCCGACCCCTCAACCAACACCTCCAAGCCTCTCTACGAATCCACCGT
CATCCTCGAATACCTCGAAGAAGCATACCCAAACCACCGACCTCTCCTCC
CTTCTGACCCGTACCAGCGCGCCCGTTCCCGCATCTGGATCGACTACGTC
ACCTCGCGCATTATCCCCACCCTGCACCGCTTCCTCCAGTACCAGCCCTC
GACGCGCGGAATTGAGGGCCTGCACCAAGCCCGTCAGGAGTTCCTCTCCA
CCTTGAAGGAATGGGCTAAGGAGATCGACTCCTCGGGGCCGTATTTCTGG
GGCTCGGAGGTGTCGCTTCCGGATTTGGTGCTCGCGCCGTGGGCGTTCCG
ACTTTGGGTGTTTGATGAGTTTAAGGGTGGATTAGGGATCCCGAAGCCCG
GAGAGGGGGGGGAGGATGAGGAGGTTTGGGGCAAATGGAGAAAGTGGCAG
GAGGCTGTTGAGGGACGGCGGAGCGCGAAGGAGACGACGAGTGAGGCGGA
GCATTATCTGCCCATCTATAAGAGGTATGCGGATGATAAGGCGCAGAGTT
GGTTGGCAAGAGCAACGAGAGAGGGTAAGGGGGTCCCATGAATGGCCGTT
CCTGACGCAGACGTTCACCCCGAAGCTACCGGTGCAGCCAAAGCGCTGGT
TGACCGACACCAAGCTGAGCAACCATTAAAGCTGTATGCCGGCTGGTTCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_50110ATCC64974_50110Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50110-T1ATCC64974_50110-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50110-T1.cdsATCC64974_50110-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_50110-T1.exon2ATCC64974_50110-T1.exon2Aspergillus niger N402exon
ATCC64974_50110-T1.exon1ATCC64974_50110-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004045
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:2242121..2243084 -
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