You are here

Home

ATCC64974_5090-T1, ATCC64974_5090-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_5090-T1
Unique NameATCC64974_5090-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1551751..1553808-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_5090-T1 ID=ATCC64974_5090-T1|Name=ATCC64974_5090-T1|organism=Aspergillus niger N402|type=mRNA|length=2058bp|location=Sequence derived from alignment at OGUI01000001.1:1551751..1553808- (Aspergillus niger N402)
ATGCACCTGCTAACCGAGCGAAAGGCTCCTCGAGCTCGCGGAATGGGCCG
ATCAGGACCCCGACGCCGCACGGGCTGTCTGACCTGCCGGGCACGTAAAG
TCCGTTGCGACGAGGCTAAACCCACGTGTGCCAATTGCACTCGCTTGCGA
CTGCAATGCACCTACAAAACCACCATTCAGACGGTCATCCCGCGACAACG
GCATGGCAGTCAAAGCTCAGGCATTGTCGCGAGCGCAGCAACGGCCCCCA
CCAGCACCGCCAGCACCACCTCATCCGACCGTCCAGACGTGAACTTCTTC
CACACCGTTCTCTGTAATGACCGACTTTCAGCATCGAATTCAGGATCCCC
GCAGCAGGCCGGTCCCAGCAATCGCCCCCAACAACAACAGCAGCAATCCC
TAGGTACGGATAATATCACCTCGTTTGATATCCTCAGTTTCATCGGCGAG
ATCACCTCCGACTTTCAGCAGAAACACCTCGATTTGACTACGAATGGCCT
GGCGGGGTTCCCAGCAGGCTCGGTTCCGGCGGCGATCGCGAACGAGGAAC
TCGACCAGAATGAACGGCCGATAAGTTGGGACGCGGGCTCAGTTTCAGTC
ATCCACGGTGATCGTTCAGAGCAAGGGTCTTCTTCCGATACAAGCGGTGG
TAGTAGTAGTGGTGGTGGTGGCCCTGGCCGGTTGACGTATGAGGATCGGT
TGTTTGCACATTTCGTGGAGGGGGACCCGCCGCCTACGATATTTGGGCCG
GTGGATTTGGATTGGGAGTACGTGCGTGCTAATGTTGTTGCACAGTCGCG
CGATAGTCGCGCAGTTCTACATGGGATTTATTGCTACGCGGAGATACATG
AGGCGTTGGTTGAGGGGAAAGCGTGGAAGTTGGCGTCGAGGTATCATCAG
CTGGCCTGTTCGGAAGTTCAGTCGTGCTTGCTGGGTGAAGTAGGGGAGAC
GGTACTGAAGAGGGTGTTCACTACGGTATTATTGTTGATGCTGGCAGAGG
TGAGTGTTTCTCAATTTTCTTCTGATAATTCAACCACGGCTGAAGGGCTT
ACGAAACAGCTCCTGTCTACCCCTGATCTATGGGGCTCAGGAACGTCCTT
TCTCCACTCTGCATATCTTCTGCTGCAGCGGTTTCACCACCGCACCAAGC
TGTGGACCAGTGTGAGCAATGTGATTGTGTCGTGGGTGTCATTGCTGGAT
GTCAAAGCACTGATAGCTGGCCGTGATGGCGATCCGCTGATTGACCTGGG
CAGCCTTTCATCCAAGGCAAGCACTACGTCTGAACTGGCCACGGAAGACA
AATGGGCCGACAATAGCGGCGACGAGGAGCCACCGAAGCCTGCATACCTT
ATGCGGGAAGCCATCACGGGCCCGGCCTTTCGCTTCTTCCTGCAAACACA
ACAGGTTATCCGACGGATCGTGTGCATCGACCTGCATCACCGCAGTCGTG
GCACTGTCAGTGACGAGTTTGAGGTGCTCCAGATAGCACACCAGGTCGGG
GCCGACCTCGAGACGCTCTGGAACCGGCGTCCGCGCGTGCTAGACGTCTA
CAGTACGCCTGAGGACCTCTTTAATACTCTACAGCCTGCTATCGCGATCG
AAATTTGCCGGACGTTCCGACAGTACATCGCCAACTTCTTAGCGATCTTT
ATCTATCTACACCGGGTTGCGTTCGCCATCTACCCACGGACTGACCGAGT
GCATCGCGCAGTGGATCGGATTATTCAGTTGGCGACTGCTGAGGTGGAGT
CCGGGAGCAATCAGCAACATCTGCCCGCCAGCTTTGTATGGCCGTTATTT
GTGGCTGGTCTCGAGGGATCGTTGGAGCAGCGAAGATGGATTGTGAAAGA
GATGCAACGGATTACTGGCAGCTGTAGTAGTCGCTGTCAGGATCCCGAGC
GCATCCGTGGAAGCTCTCGTACGGCGCGACATCCGCATGCGGGGAAAGCA
TTGCTACTGCTAGAGGAGATGACGCGACGACAAGATGCGTCGCGGACATG
GGCGGACTCGCGGTGCGTGCGACGGGAGCTATTTACTGACTTCTTCGTGA
TGATCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000001.1:1551751..1553808-

>ATCC64974_5090-T1 ID=ATCC64974_5090-T1|Name=ATCC64974_5090-T1|organism=Aspergillus niger N402|type=CDS|length=2058bp|location=Sequence derived from alignment at OGUI01000001.1:1551751..1553808- (Aspergillus niger N402)
ATGCACCTGCTAACCGAGCGAAAGGCTCCTCGAGCTCGCGGAATGGGCCG
ATCAGGACCCCGACGCCGCACGGGCTGTCTGACCTGCCGGGCACGTAAAG
TCCGTTGCGACGAGGCTAAACCCACGTGTGCCAATTGCACTCGCTTGCGA
CTGCAATGCACCTACAAAACCACCATTCAGACGGTCATCCCGCGACAACG
GCATGGCAGTCAAAGCTCAGGCATTGTCGCGAGCGCAGCAACGGCCCCCA
CCAGCACCGCCAGCACCACCTCATCCGACCGTCCAGACGTGAACTTCTTC
CACACCGTTCTCTGTAATGACCGACTTTCAGCATCGAATTCAGGATCCCC
GCAGCAGGCCGGTCCCAGCAATCGCCCCCAACAACAACAGCAGCAATCCC
TAGGTACGGATAATATCACCTCGTTTGATATCCTCAGTTTCATCGGCGAG
ATCACCTCCGACTTTCAGCAGAAACACCTCGATTTGACTACGAATGGCCT
GGCGGGGTTCCCAGCAGGCTCGGTTCCGGCGGCGATCGCGAACGAGGAAC
TCGACCAGAATGAACGGCCGATAAGTTGGGACGCGGGCTCAGTTTCAGTC
ATCCACGGTGATCGTTCAGAGCAAGGGTCTTCTTCCGATACAAGCGGTGG
TAGTAGTAGTGGTGGTGGTGGCCCTGGCCGGTTGACGTATGAGGATCGGT
TGTTTGCACATTTCGTGGAGGGGGACCCGCCGCCTACGATATTTGGGCCG
GTGGATTTGGATTGGGAGTACGTGCGTGCTAATGTTGTTGCACAGTCGCG
CGATAGTCGCGCAGTTCTACATGGGATTTATTGCTACGCGGAGATACATG
AGGCGTTGGTTGAGGGGAAAGCGTGGAAGTTGGCGTCGAGGTATCATCAG
CTGGCCTGTTCGGAAGTTCAGTCGTGCTTGCTGGGTGAAGTAGGGGAGAC
GGTACTGAAGAGGGTGTTCACTACGGTATTATTGTTGATGCTGGCAGAGG
TGAGTGTTTCTCAATTTTCTTCTGATAATTCAACCACGGCTGAAGGGCTT
ACGAAACAGCTCCTGTCTACCCCTGATCTATGGGGCTCAGGAACGTCCTT
TCTCCACTCTGCATATCTTCTGCTGCAGCGGTTTCACCACCGCACCAAGC
TGTGGACCAGTGTGAGCAATGTGATTGTGTCGTGGGTGTCATTGCTGGAT
GTCAAAGCACTGATAGCTGGCCGTGATGGCGATCCGCTGATTGACCTGGG
CAGCCTTTCATCCAAGGCAAGCACTACGTCTGAACTGGCCACGGAAGACA
AATGGGCCGACAATAGCGGCGACGAGGAGCCACCGAAGCCTGCATACCTT
ATGCGGGAAGCCATCACGGGCCCGGCCTTTCGCTTCTTCCTGCAAACACA
ACAGGTTATCCGACGGATCGTGTGCATCGACCTGCATCACCGCAGTCGTG
GCACTGTCAGTGACGAGTTTGAGGTGCTCCAGATAGCACACCAGGTCGGG
GCCGACCTCGAGACGCTCTGGAACCGGCGTCCGCGCGTGCTAGACGTCTA
CAGTACGCCTGAGGACCTCTTTAATACTCTACAGCCTGCTATCGCGATCG
AAATTTGCCGGACGTTCCGACAGTACATCGCCAACTTCTTAGCGATCTTT
ATCTATCTACACCGGGTTGCGTTCGCCATCTACCCACGGACTGACCGAGT
GCATCGCGCAGTGGATCGGATTATTCAGTTGGCGACTGCTGAGGTGGAGT
CCGGGAGCAATCAGCAACATCTGCCCGCCAGCTTTGTATGGCCGTTATTT
GTGGCTGGTCTCGAGGGATCGTTGGAGCAGCGAAGATGGATTGTGAAAGA
GATGCAACGGATTACTGGCAGCTGTAGTAGTCGCTGTCAGGATCCCGAGC
GCATCCGTGGAAGCTCTCGTACGGCGCGACATCCGCATGCGGGGAAAGCA
TTGCTACTGCTAGAGGAGATGACGCGACGACAAGATGCGTCGCGGACATG
GGCGGACTCGCGGTGCGTGCGACGGGAGCTATTTACTGACTTCTTCGTGA
TGATCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_5090ATCC64974_5090Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5090-T1.cdsATCC64974_5090-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5090-T1.exon1ATCC64974_5090-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5090-T1ATCC64974_5090-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1551751..1553808 -
Powered by Drupal