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ATCC64974_5170-T1, ATCC64974_5170-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_5170-T1
Unique NameATCC64974_5170-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1565685..1567091-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_5170-T1 ID=ATCC64974_5170-T1|Name=ATCC64974_5170-T1|organism=Aspergillus niger N402|type=mRNA|length=1407bp|location=Sequence derived from alignment at OGUI01000001.1:1565685..1567091- (Aspergillus niger N402)
ATGGCGAAGGTCATTTTTACACCATGGAAGGAGCACTCGCAATTACTCGC
AGTGCGGAGTCAATTCTACCCTGCACCGTTTTATGATGGGCCCGACATGC
GCTCCAAGGCCTGCGCCACTGTATGCGAAAAGACACCCTGAAATAATATA
GTTATCTTTACTTGACCCTAACATGAATTACAGGTCGCGGCTTGGAAGTT
ACGAGGAAATCTGCCACATCCAGTCGAGGCCACGGCCTTGCTAACGGATG
CTATCCTTCATGATGATGCCCTGAAAAATTCCATCTTTTCTATTCGGGCT
ACGTACTCGGCTGCGTTTTGTCGGTATGACTGTCTGCTTTGATTCATCGA
TTACATGATTACGCAACAAGTGTAACGATCACTAACGCCAGTTAGATTCG
TGACGGGGCTCGTCGACTCCAAGCTGAACGGGCAGCGTAAAACCATGTTC
CAACGAGCCATTGATCTGGGCCTACCGGCCTCATTTGTGGAACTGCGTCA
CGAGGCGACGCATCGTGAACTGCCTTCTCTAACAGTGCTGCGCAATGCCA
CGCAGCGGTCCCTTGAGTGGCTGTGGGACTACTACTGGGCCAAGACTGAT
CTGAGTGCTGATATGATGCCCGTGTCAGAGCCTGAGGCATTTGACGGTGC
TGAAGATGACGTCGAGCCCATCAAGGCGGCTTTAAGAACTGAATTCGAGC
ACTTACTGGCTGAAGAAGATTCGTCAGAACCGCCGCGGAAGAAGAGGAGG
TTCCAGCAGAACGTCTCGTCTACGTCTACGCATTTGGTCTCGATATGCAA
GTCTTCCAGTCGTGGGGCGTCTGCGCTAGCAGGCGTGATCGTGGAGGACT
CGGTGTTGGTTCCTGCTGGACGGAAGTGAGTTTTCTTGATATTCTGATCG
TGTATGAACATCTATAAGCTGACTTGGTACAGAATGGGTGATTCCATGAC
GGGCATGTTCGCTAAGTGGGATTCATTATTGCAGATGCTCGCGGAGGGCC
ATCCCCCGGTCCTGGCATCGCTGATGGAGGAGATGGTGAATGTACTCGCC
TTTTCAGGCTCAAAGAACGTGAAAAGCGACCCTCAGTTCGAAGGATTATA
CATGTGGCTGGACCATATACTTCAATCGCCGGAATGGGGGTCTCGAAGAC
GACTACTGTCCCACGCATATCTTCTTGCCGTTTGCGAGCAGAGTTCCAAC
CACTGGACGACGCTTCTTAAGGAAAGCTTACAGCAGAGGACGGACGATTT
AGCACCTAGCAAGCAGTCGTCCACGTCAAAGAAGCAGTCGAAGAAGGACG
GATCTGGTCTCAAGCGGACTGCAGATGCCGACGATTTGAAAGAGTTGAAG
AAATTCGGATGGGAGACGGTAGATACGTGGGATACGCGACCGTTAGGGAT
AGTATAG
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Coding sequence (CDS) from alignment at OGUI01000001.1:1565685..1567091-

>ATCC64974_5170-T1 ID=ATCC64974_5170-T1|Name=ATCC64974_5170-T1|organism=Aspergillus niger N402|type=CDS|length=4860bp|location=Sequence derived from alignment at OGUI01000001.1:1565685..1567091- (Aspergillus niger N402)
AATGGGTGATTCCATGACGGGCATGTTCGCTAAGTGGGATTCATTATTGC
AGATGCTCGCGGAGGGCCATCCCCCGGTCCTGGCATCGCTGATGGAGGAG
ATGGTGAATGTACTCGCCTTTTCAGGCTCAAAGAACGTGAAAAGCGACCC
TCAGTTCGAAGGATTATACATGTGGCTGGACCATATACTTCAATCGCCGG
AATGGGGGTCTCGAAGACGACTACTGTCCCACGCATATCTTCTTGCCGTT
TGCGAGCAGAGTTCCAACCACTGGACGACGCTTCTTAAGGAAAGCTTACA
GCAGAGGACGGACGATTTAGCACCTAGCAAGCAGTCGTCCACGTCAAAGA
AGCAGTCGAAGAAGGACGGATCTGGTCTCAAGCGGACTGCAGATGCCGAC
GATTTGAAAGAGTTGAAGAAATTCGGATGGGAGACGGTAGATACGTGGGA
TACGCGACCGTTAGGGATAGTATAGATTCGTGACGGGGCTCGTCGACTCC
AAGCTGAACGGGCAGCGTAAAACCATGTTCCAACGAGCCATTGATCTGGG
CCTACCGGCCTCATTTGTGGAACTGCGTCACGAGGCGACGCATCGTGAAC
TGCCTTCTCTAACAGTGCTGCGCAATGCCACGCAGCGGTCCCTTGAGTGG
CTGTGGGACTACTACTGGGCCAAGACTGATCTGAGTGCTGATATGATGCC
CGTGTCAGAGCCTGAGGCATTTGACGGTGCTGAAGATGACGTCGAGCCCA
TCAAGGCGGCTTTAAGAACTGAATTCGAGCACTTACTGGCTGAAGAAGAT
TCGTCAGAACCGCCGCGGAAGAAGAGGAGGTTCCAGCAGAACGTCTCGTC
TACGTCTACGCATTTGGTCTCGATATGCAAGTCTTCCAGTCGTGGGGCGT
CTGCGCTAGCAGGCGTGATCGTGGAGGACTCGGTGTTGGTTCCTGCTGGA
CGGAAGTCGCGGCTTGGAAGTTACGAGGAAATCTGCCACATCCAGTCGAG
GCCACGGCCTTGCTAACGGATGCTATCCTTCATGATGATGCCCTGAAAAA
TTCCATCTTTTCTATTCGGGCTACGTACTCGGCTGCGTTTTGTCGATGGC
GAAGGTCATTTTTACACCATGGAAGGAGCACTCGCAATTACTCGCAGTGC
GGAGTCAATTCTACCCTGCACCGTTTTATGATGGGCCCGACATGCGCTCC
AAGGCCTGCGCCACTAATGGGTGATTCCATGACGGGCATGTTCGCTAAGT
GGGATTCATTATTGCAGATGCTCGCGGAGGGCCATCCCCCGGTCCTGGCA
TCGCTGATGGAGGAGATGGTGAATGTACTCGCCTTTTCAGGCTCAAAGAA
CGTGAAAAGCGACCCTCAGTTCGAAGGATTATACATGTGGCTGGACCATA
TACTTCAATCGCCGGAATGGGGGTCTCGAAGACGACTACTGTCCCACGCA
TATCTTCTTGCCGTTTGCGAGCAGAGTTCCAACCACTGGACGACGCTTCT
TAAGGAAAGCTTACAGCAGAGGACGGACGATTTAGCACCTAGCAAGCAGT
CGTCCACGTCAAAGAAGCAGTCGAAGAAGGACGGATCTGGTCTCAAGCGG
ACTGCAGATGCCGACGATTTGAAAGAGTTGAAGAAATTCGGATGGGAGAC
GGTAGATACGTGGGATACGCGACCGTTAGGGATAGTATAGATTCGTGACG
GGGCTCGTCGACTCCAAGCTGAACGGGCAGCGTAAAACCATGTTCCAACG
AGCCATTGATCTGGGCCTACCGGCCTCATTTGTGGAACTGCGTCACGAGG
CGACGCATCGTGAACTGCCTTCTCTAACAGTGCTGCGCAATGCCACGCAG
CGGTCCCTTGAGTGGCTGTGGGACTACTACTGGGCCAAGACTGATCTGAG
TGCTGATATGATGCCCGTGTCAGAGCCTGAGGCATTTGACGGTGCTGAAG
ATGACGTCGAGCCCATCAAGGCGGCTTTAAGAACTGAATTCGAGCACTTA
CTGGCTGAAGAAGATTCGTCAGAACCGCCGCGGAAGAAGAGGAGGTTCCA
GCAGAACGTCTCGTCTACGTCTACGCATTTGGTCTCGATATGCAAGTCTT
CCAGTCGTGGGGCGTCTGCGCTAGCAGGCGTGATCGTGGAGGACTCGGTG
TTGGTTCCTGCTGGACGGAAGTCGCGGCTTGGAAGTTACGAGGAAATCTG
CCACATCCAGTCGAGGCCACGGCCTTGCTAACGGATGCTATCCTTCATGA
TGATGCCCTGAAAAATTCCATCTTTTCTATTCGGGCTACGTACTCGGCTG
CGTTTTGTCGATGGCGAAGGTCATTTTTACACCATGGAAGGAGCACTCGC
AATTACTCGCAGTGCGGAGTCAATTCTACCCTGCACCGTTTTATGATGGG
CCCGACATGCGCTCCAAGGCCTGCGCCACTAATGGGTGATTCCATGACGG
GCATGTTCGCTAAGTGGGATTCATTATTGCAGATGCTCGCGGAGGGCCAT
CCCCCGGTCCTGGCATCGCTGATGGAGGAGATGGTGAATGTACTCGCCTT
TTCAGGCTCAAAGAACGTGAAAAGCGACCCTCAGTTCGAAGGATTATACA
TGTGGCTGGACCATATACTTCAATCGCCGGAATGGGGGTCTCGAAGACGA
CTACTGTCCCACGCATATCTTCTTGCCGTTTGCGAGCAGAGTTCCAACCA
CTGGACGACGCTTCTTAAGGAAAGCTTACAGCAGAGGACGGACGATTTAG
CACCTAGCAAGCAGTCGTCCACGTCAAAGAAGCAGTCGAAGAAGGACGGA
TCTGGTCTCAAGCGGACTGCAGATGCCGACGATTTGAAAGAGTTGAAGAA
ATTCGGATGGGAGACGGTAGATACGTGGGATACGCGACCGTTAGGGATAG
TATAGATTCGTGACGGGGCTCGTCGACTCCAAGCTGAACGGGCAGCGTAA
AACCATGTTCCAACGAGCCATTGATCTGGGCCTACCGGCCTCATTTGTGG
AACTGCGTCACGAGGCGACGCATCGTGAACTGCCTTCTCTAACAGTGCTG
CGCAATGCCACGCAGCGGTCCCTTGAGTGGCTGTGGGACTACTACTGGGC
CAAGACTGATCTGAGTGCTGATATGATGCCCGTGTCAGAGCCTGAGGCAT
TTGACGGTGCTGAAGATGACGTCGAGCCCATCAAGGCGGCTTTAAGAACT
GAATTCGAGCACTTACTGGCTGAAGAAGATTCGTCAGAACCGCCGCGGAA
GAAGAGGAGGTTCCAGCAGAACGTCTCGTCTACGTCTACGCATTTGGTCT
CGATATGCAAGTCTTCCAGTCGTGGGGCGTCTGCGCTAGCAGGCGTGATC
GTGGAGGACTCGGTGTTGGTTCCTGCTGGACGGAAGTCGCGGCTTGGAAG
TTACGAGGAAATCTGCCACATCCAGTCGAGGCCACGGCCTTGCTAACGGA
TGCTATCCTTCATGATGATGCCCTGAAAAATTCCATCTTTTCTATTCGGG
CTACGTACTCGGCTGCGTTTTGTCGATGGCGAAGGTCATTTTTACACCAT
GGAAGGAGCACTCGCAATTACTCGCAGTGCGGAGTCAATTCTACCCTGCA
CCGTTTTATGATGGGCCCGACATGCGCTCCAAGGCCTGCGCCACTAATGG
GTGATTCCATGACGGGCATGTTCGCTAAGTGGGATTCATTATTGCAGATG
CTCGCGGAGGGCCATCCCCCGGTCCTGGCATCGCTGATGGAGGAGATGGT
GAATGTACTCGCCTTTTCAGGCTCAAAGAACGTGAAAAGCGACCCTCAGT
TCGAAGGATTATACATGTGGCTGGACCATATACTTCAATCGCCGGAATGG
GGGTCTCGAAGACGACTACTGTCCCACGCATATCTTCTTGCCGTTTGCGA
GCAGAGTTCCAACCACTGGACGACGCTTCTTAAGGAAAGCTTACAGCAGA
GGACGGACGATTTAGCACCTAGCAAGCAGTCGTCCACGTCAAAGAAGCAG
TCGAAGAAGGACGGATCTGGTCTCAAGCGGACTGCAGATGCCGACGATTT
GAAAGAGTTGAAGAAATTCGGATGGGAGACGGTAGATACGTGGGATACGC
GACCGTTAGGGATAGTATAGATTCGTGACGGGGCTCGTCGACTCCAAGCT
GAACGGGCAGCGTAAAACCATGTTCCAACGAGCCATTGATCTGGGCCTAC
CGGCCTCATTTGTGGAACTGCGTCACGAGGCGACGCATCGTGAACTGCCT
TCTCTAACAGTGCTGCGCAATGCCACGCAGCGGTCCCTTGAGTGGCTGTG
GGACTACTACTGGGCCAAGACTGATCTGAGTGCTGATATGATGCCCGTGT
CAGAGCCTGAGGCATTTGACGGTGCTGAAGATGACGTCGAGCCCATCAAG
GCGGCTTTAAGAACTGAATTCGAGCACTTACTGGCTGAAGAAGATTCGTC
AGAACCGCCGCGGAAGAAGAGGAGGTTCCAGCAGAACGTCTCGTCTACGT
CTACGCATTTGGTCTCGATATGCAAGTCTTCCAGTCGTGGGGCGTCTGCG
CTAGCAGGCGTGATCGTGGAGGACTCGGTGTTGGTTCCTGCTGGACGGAA
GTCGCGGCTTGGAAGTTACGAGGAAATCTGCCACATCCAGTCGAGGCCAC
GGCCTTGCTAACGGATGCTATCCTTCATGATGATGCCCTGAAAAATTCCA
TCTTTTCTATTCGGGCTACGTACTCGGCTGCGTTTTGTCGATGGCGAAGG
TCATTTTTACACCATGGAAGGAGCACTCGCAATTACTCGCAGTGCGGAGT
CAATTCTACCCTGCACCGTTTTATGATGGGCCCGACATGCGCTCCAAGGC
CTGCGCCACT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0090730Las1 complex
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0004519endonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_5170ATCC64974_5170Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5170-T1ATCC64974_5170-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5170-T1.cdsATCC64974_5170-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5170-T1.exon4ATCC64974_5170-T1.exon4Aspergillus niger N402exon
ATCC64974_5170-T1.exon3ATCC64974_5170-T1.exon3Aspergillus niger N402exon
ATCC64974_5170-T1.exon2ATCC64974_5170-T1.exon2Aspergillus niger N402exon
ATCC64974_5170-T1.exon1ATCC64974_5170-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR007174
DBxrefPFAM:PF04031
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1565685..1567091 -
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