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ATCC64974_5200-T1, ATCC64974_5200-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_5200-T1
Unique NameATCC64974_5200-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1583979..1584824+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_5200-T1 ID=ATCC64974_5200-T1|Name=ATCC64974_5200-T1|organism=Aspergillus niger N402|type=mRNA|length=846bp|location=Sequence derived from alignment at OGUI01000001.1:1583979..1584824+ (Aspergillus niger N402)
ATGGCGCAACCCGCCCGCCACGCCGCGATGCTATCCATTAGCAACAGCGG
CCCAAACCTCCCCGTGGCAGCATCAGCCGACAGACAGCAACCAGCACAGC
ACATCCACACGCAATCCCAATCAAGCCAGGGCCTGCGCGTGCCGTCAAAC
CGCAAAACCATCTATGACCGACACCTGAACCGCAGCCGCAATGCGGAGCT
CAGCCGGGCTAGCTTCGCCTTTCTGTTCGCGGAGATGGTGACTTATGCTC
AGAGACGAGTAACAGGGATTCAAGATTTAGAACGACGGTATGGGGCTTTA
CTCTGCTTGCTTCCACCCTCCCGTTCACATACTGATGAGTGATAATGGTG
CAGATTGAACGAACAAGGCTACCCCTTAGGTCTCCGACTCCTCGACCTCC
TCTTCTACCGCACCATGTCCAGTTCCACTTCCTCCGCTCTATCCAGTTCC
TCCTCGACTTCTTCCTCGCCTCCGAATCGACCCCTCCGTATCCTTCCCCT
CCTTCATCTCATCCACGGTCCCCTCTGGCGCCTTCTCTTTAATCGTCCTG
CCGATGCCCTCGAGCACTCTGTCTCTCCCGAGACGCCTAATGAATATATG
ATTACGGATAATGATCCCCTCGTTAATACATATATCAGTGTGCCGAAGGA
AATGAGCATGCTTAATTGCGCGGCTTTCGTCGCGGGTATTATTGAGGGCG
TTTGCGATGGGTGTGGCTTCGAGGCTAAGGTCACCGCTCATAATCAGCCC
ACGGAGATGTGGCCTGGGAGGACGATATTCTTGTTGCGCTTTGGGGAGAG
CGTTATGGAGAGGGAGAAGGTTTTGGAGAGGGCTGGCGTTAAATAA
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Coding sequence (CDS) from alignment at OGUI01000001.1:1583979..1584824+

>ATCC64974_5200-T1 ID=ATCC64974_5200-T1|Name=ATCC64974_5200-T1|organism=Aspergillus niger N402|type=CDS|length=1560bp|location=Sequence derived from alignment at OGUI01000001.1:1583979..1584824+ (Aspergillus niger N402)
ATGGCGCAACCCGCCCGCCACGCCGCGATGCTATCCATTAGCAACAGCGG
CCCAAACCTCCCCGTGGCAGCATCAGCCGACAGACAGCAACCAGCACAGC
ACATCCACACGCAATCCCAATCAAGCCAGGGCCTGCGCGTGCCGTCAAAC
CGCAAAACCATCTATGACCGACACCTGAACCGCAGCCGCAATGCGGAGCT
CAGCCGGGCTAGCTTCGCCTTTCTGTTCGCGGAGATGGTGACTTATGCTC
AGAGACGAGTAACAGGGATTCAAGATTTAGAACGACGATTGAACGAACAA
GGCTACCCCTTAGGTCTCCGACTCCTCGACCTCCTCTTCTACCGCACCAT
GTCCAGTTCCACTTCCTCCGCTCTATCCAGTTCCTCCTCGACTTCTTCCT
CGCCTCCGAATCGACCCCTCCGTATCCTTCCCCTCCTTCATCTCATCCAC
GGTCCCCTCTGGCGCCTTCTCTTTAATCGTCCTGCCGATGCCCTCGAGCA
CTCTGTCTCTCCCGAGACGCCTAATGAATATATGATTACGGATAATGATC
CCCTCGTTAATACATATATCAGTGTGCCGAAGGAAATGAGCATGCTTAAT
TGCGCGGCTTTCGTCGCGGGTATTATTGAGGGCGTTTGCGATGGGTGTGG
CTTCGAGGCTAAGGTCACCGCTCATAATCAGCCCACGGAGATGTGGCCTG
GGAGGACGATATTCTTGTTGCGCTTTGGGGAGAGCGTTATGGAGAGGGAG
AAGGTTTTGGAGAGGGCTGGCGTTAAATAAATGGCGCAACCCGCCCGCCA
CGCCGCGATGCTATCCATTAGCAACAGCGGCCCAAACCTCCCCGTGGCAG
CATCAGCCGACAGACAGCAACCAGCACAGCACATCCACACGCAATCCCAA
TCAAGCCAGGGCCTGCGCGTGCCGTCAAACCGCAAAACCATCTATGACCG
ACACCTGAACCGCAGCCGCAATGCGGAGCTCAGCCGGGCTAGCTTCGCCT
TTCTGTTCGCGGAGATGGTGACTTATGCTCAGAGACGAGTAACAGGGATT
CAAGATTTAGAACGACGATTGAACGAACAAGGCTACCCCTTAGGTCTCCG
ACTCCTCGACCTCCTCTTCTACCGCACCATGTCCAGTTCCACTTCCTCCG
CTCTATCCAGTTCCTCCTCGACTTCTTCCTCGCCTCCGAATCGACCCCTC
CGTATCCTTCCCCTCCTTCATCTCATCCACGGTCCCCTCTGGCGCCTTCT
CTTTAATCGTCCTGCCGATGCCCTCGAGCACTCTGTCTCTCCCGAGACGC
CTAATGAATATATGATTACGGATAATGATCCCCTCGTTAATACATATATC
AGTGTGCCGAAGGAAATGAGCATGCTTAATTGCGCGGCTTTCGTCGCGGG
TATTATTGAGGGCGTTTGCGATGGGTGTGGCTTCGAGGCTAAGGTCACCG
CTCATAATCAGCCCACGGAGATGTGGCCTGGGAGGACGATATTCTTGTTG
CGCTTTGGGGAGAGCGTTATGGAGAGGGAGAAGGTTTTGGAGAGGGCTGG
CGTTAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030008TRAPP complex
Vocabulary: Biological Process
TermDefinition
GO:0048193Golgi vesicle transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_5200ATCC64974_5200Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5200-T1.exon1ATCC64974_5200-T1.exon1Aspergillus niger N402exon
ATCC64974_5200-T1.exon2ATCC64974_5200-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5200-T1.cdsATCC64974_5200-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5200-T1ATCC64974_5200-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263ZW6
DBxrefInterPro:IPR024096
DBxrefInterPro:IPR007194
DBxrefInterPro:IPR016696
DBxrefPFAM:PF04051
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1583979..1584824 +
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