You are here

Home

ATCC64974_53160-T1, ATCC64974_53160-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_53160-T1
Unique NameATCC64974_53160-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3234706..3235990+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_53160-T1 ID=ATCC64974_53160-T1|Name=ATCC64974_53160-T1|organism=Aspergillus niger N402|type=mRNA|length=1285bp|location=Sequence derived from alignment at OGUI01000007.1:3234706..3235990+ (Aspergillus niger N402)
ATGGCCAGCATCGCCGATCTACAAGCCCGCTTGAAAGAGCTCTCAACAGC
TCTGTCCCACATCCAGCCGCTGGTCTCTCGGTTAAAGGGCTTTACGACTG
CAGTTGGACAGGGCGATCAGCCGCGATTGGAACTAGGGACGGAGATCCAT
ACTCGACTGAAAGAGGCGGAGGAGCAATTGGAGTTGCTGAAGGTCGAGGT
TGAGGCCCTGGAGGCTGCAGCGGATACGCGGCGCAAGGGTGTGGATAATG
AGAAGGAGTCGGAGAGGGAACGGGTTATTGCCTTGGCTGGACGGTTGGCG
GATGATTTGAAGAGGTAGGTGGAATCGACTGATTGCTCTTCCTGGATTGT
TTACTAATGGGTATGTTACGGCTTTGGCAGAACGAGAGGAGACTTCCGGA
ACGCACAATTACAAGCGAAGCGGAACGCTGAAGTTGCCCGACGGAAAGAG
CGAGAGCTACTGTTTACGAGGTCACAAAGTGCGGAGAGGAAGAAGCAGTC
GAGTGAGAAGCTGACGCAGGATGATATTGTCATGAATGCTTCGAATGATG
TTACGGCTGCGCTGAGACGGACGCATCAGTTGATGCAGGCGGAGCTGTCG
CGGAGTCAGTTTGCGCAGGAGACGTTAGGTTTGTGCTGGTTTACCTTGGG
TGCAGGTCAGGGTAATGGCTAACATTGGTGGTTTAGATCAATCGACTGCT
GCGCTGTCCTCGCTGTCAGAATCCTATACAGATCTCGATTCTTTGATTTC
GTCGTCACGCAATCTCATCGGGTCTTTGCTACGCTCGCAAAAGTCGGATA
CTTGGTACCTTGAGACGGCTTTCTACATATTGGTTGGCACCATTATTTGG
CTTGTCTTCCGGCGGATATTATATGGTCCCCTGTGGTGGCTCGTCTGGCT
GCCTCTCAGGCTGTTCGCGAGGTTCACGTTTGCTATTTTGGGCGCCGTCG
GGATTACCAGTAAGGCTGTTCAGTCTTCTGAACCTAGTACGATGCTCGAA
TATGTGCCGCAAGAGACCCCAATGGTTGAGCAGAAGGTGGAGCCGAACAT
CCAAAGTGCTGAGGGCGAAGCGGTCTGGGATCAAGTTCCAGTTACGGATG
AGGCAGAGGAGGACCGCTTAATTGATGAGATCGGCAAAATGGTGGAAGAA
AGCGAGGAGCAAGAGGAGACCAACATTGACGACATCTCAGAAGAGGAAAG
GCAAAGGCAGGCGGAGTTGCCCCGGAACCCTAAGAAGAGGATGTTCGAGG
CTACGGATGTACCACAGCAGAAGGACGAACTATAG
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:3234706..3235990+

>ATCC64974_53160-T1 ID=ATCC64974_53160-T1|Name=ATCC64974_53160-T1|organism=Aspergillus niger N402|type=CDS|length=3483bp|location=Sequence derived from alignment at OGUI01000007.1:3234706..3235990+ (Aspergillus niger N402)
ATGGCCAGCATCGCCGATCTACAAGCCCGCTTGAAAGAGCTCTCAACAGC
TCTGTCCCACATCCAGCCGCTGGTCTCTCGGTTAAAGGGCTTTACGACTG
CAGTTGGACAGGGCGATCAGCCGCGATTGGAACTAGGGACGGAGATCCAT
ACTCGACTGAAAGAGGCGGAGGAGCAATTGGAGTTGCTGAAGGTCGAGGT
TGAGGCCCTGGAGGCTGCAGCGGATACGCGGCGCAAGGGTGTGGATAATG
AGAAGGAGTCGGAGAGGGAACGGGTTATTGCCTTGGCTGGACGGTTGGCG
GATGATTTGAAGAGAACGAGAGGAGACTTCCGGAACGCACAATTACAAGC
GAAGCGGAACGCTGAAGTTGCCCGACGGAAAGAGCGAGAGCTACTGTTTA
CGAGGTCACAAAGTGCGGAGAGGAAGAAGCAGTCGAGTGAGAAGCTGACG
CAGGATGATATTGTCATGAATGCTTCGAATGATGTTACGGCTGCGCTGAG
ACGGACGCATCAGTTGATGCAGGCGGAGCTGTCGCGGAGTCAGTTTGCGC
AGGAGACGTTAGATCAATCGACTGCTGCGCTGTCCTCGCTGTCAGAATCC
TATACAGATCTCGATTCTTTGATTTCGTCGTCACGCAATCTCATCGGGTC
TTTGCTACGCTCGCAAAAGTCGGATACTTGGTACCTTGAGACGGCTTTCT
ACATATTGGTTGGCACCATTATTTGGCTTGTCTTCCGGCGGATATTATAT
GGTCCCCTGTGGTGGCTCGTCTGGCTGCCTCTCAGGCTGTTCGCGAGGTT
CACGTTTGCTATTTTGGGCGCCGTCGGGATTACCAGTAAGGCTGTTCAGT
CTTCTGAACCTAGTACGATGCTCGAATATGTGCCGCAAGAGACCCCAATG
GTTGAGCAGAAGGTGGAGCCGAACATCCAAAGTGCTGAGGGCGAAGCGGT
CTGGGATCAAGTTCCAGTTACGGATGAGGCAGAGGAGGACCGCTTAATTG
ATGAGATCGGCAAAATGGTGGAAGAAAGCGAGGAGCAAGAGGAGACCAAC
ATTGACGACATCTCAGAAGAGGAAAGGCAAAGGCAGGCGGAGTTGCCCCG
GAACCCTAAGAAGAGGATGTTCGAGGCTACGGATGTACCACAGCAGAAGG
ACGAACTATAGATGGCCAGCATCGCCGATCTACAAGCCCGCTTGAAAGAG
CTCTCAACAGCTCTGTCCCACATCCAGCCGCTGGTCTCTCGGTTAAAGGG
CTTTACGACTGCAGTTGGACAGGGCGATCAGCCGCGATTGGAACTAGGGA
CGGAGATCCATACTCGACTGAAAGAGGCGGAGGAGCAATTGGAGTTGCTG
AAGGTCGAGGTTGAGGCCCTGGAGGCTGCAGCGGATACGCGGCGCAAGGG
TGTGGATAATGAGAAGGAGTCGGAGAGGGAACGGGTTATTGCCTTGGCTG
GACGGTTGGCGGATGATTTGAAGAGAACGAGAGGAGACTTCCGGAACGCA
CAATTACAAGCGAAGCGGAACGCTGAAGTTGCCCGACGGAAAGAGCGAGA
GCTACTGTTTACGAGGTCACAAAGTGCGGAGAGGAAGAAGCAGTCGAGTG
AGAAGCTGACGCAGGATGATATTGTCATGAATGCTTCGAATGATGTTACG
GCTGCGCTGAGACGGACGCATCAGTTGATGCAGGCGGAGCTGTCGCGGAG
TCAGTTTGCGCAGGAGACGTTAGATCAATCGACTGCTGCGCTGTCCTCGC
TGTCAGAATCCTATACAGATCTCGATTCTTTGATTTCGTCGTCACGCAAT
CTCATCGGGTCTTTGCTACGCTCGCAAAAGTCGGATACTTGGTACCTTGA
GACGGCTTTCTACATATTGGTTGGCACCATTATTTGGCTTGTCTTCCGGC
GGATATTATATGGTCCCCTGTGGTGGCTCGTCTGGCTGCCTCTCAGGCTG
TTCGCGAGGTTCACGTTTGCTATTTTGGGCGCCGTCGGGATTACCAGTAA
GGCTGTTCAGTCTTCTGAACCTAGTACGATGCTCGAATATGTGCCGCAAG
AGACCCCAATGGTTGAGCAGAAGGTGGAGCCGAACATCCAAAGTGCTGAG
GGCGAAGCGGTCTGGGATCAAGTTCCAGTTACGGATGAGGCAGAGGAGGA
CCGCTTAATTGATGAGATCGGCAAAATGGTGGAAGAAAGCGAGGAGCAAG
AGGAGACCAACATTGACGACATCTCAGAAGAGGAAAGGCAAAGGCAGGCG
GAGTTGCCCCGGAACCCTAAGAAGAGGATGTTCGAGGCTACGGATGTACC
ACAGCAGAAGGACGAACTATAGATGGCCAGCATCGCCGATCTACAAGCCC
GCTTGAAAGAGCTCTCAACAGCTCTGTCCCACATCCAGCCGCTGGTCTCT
CGGTTAAAGGGCTTTACGACTGCAGTTGGACAGGGCGATCAGCCGCGATT
GGAACTAGGGACGGAGATCCATACTCGACTGAAAGAGGCGGAGGAGCAAT
TGGAGTTGCTGAAGGTCGAGGTTGAGGCCCTGGAGGCTGCAGCGGATACG
CGGCGCAAGGGTGTGGATAATGAGAAGGAGTCGGAGAGGGAACGGGTTAT
TGCCTTGGCTGGACGGTTGGCGGATGATTTGAAGAGAACGAGAGGAGACT
TCCGGAACGCACAATTACAAGCGAAGCGGAACGCTGAAGTTGCCCGACGG
AAAGAGCGAGAGCTACTGTTTACGAGGTCACAAAGTGCGGAGAGGAAGAA
GCAGTCGAGTGAGAAGCTGACGCAGGATGATATTGTCATGAATGCTTCGA
ATGATGTTACGGCTGCGCTGAGACGGACGCATCAGTTGATGCAGGCGGAG
CTGTCGCGGAGTCAGTTTGCGCAGGAGACGTTAGATCAATCGACTGCTGC
GCTGTCCTCGCTGTCAGAATCCTATACAGATCTCGATTCTTTGATTTCGT
CGTCACGCAATCTCATCGGGTCTTTGCTACGCTCGCAAAAGTCGGATACT
TGGTACCTTGAGACGGCTTTCTACATATTGGTTGGCACCATTATTTGGCT
TGTCTTCCGGCGGATATTATATGGTCCCCTGTGGTGGCTCGTCTGGCTGC
CTCTCAGGCTGTTCGCGAGGTTCACGTTTGCTATTTTGGGCGCCGTCGGG
ATTACCAGTAAGGCTGTTCAGTCTTCTGAACCTAGTACGATGCTCGAATA
TGTGCCGCAAGAGACCCCAATGGTTGAGCAGAAGGTGGAGCCGAACATCC
AAAGTGCTGAGGGCGAAGCGGTCTGGGATCAAGTTCCAGTTACGGATGAG
GCAGAGGAGGACCGCTTAATTGATGAGATCGGCAAAATGGTGGAAGAAAG
CGAGGAGCAAGAGGAGACCAACATTGACGACATCTCAGAAGAGGAAAGGC
AAAGGCAGGCGGAGTTGCCCCGGAACCCTAAGAAGAGGATGTTCGAGGCT
ACGGATGTACCACAGCAGAAGGACGAACTATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006890retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
Vocabulary: Molecular Function
TermDefinition
GO:0005484SNAP receptor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_53160ATCC64974_53160Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_53160-T1.exon1ATCC64974_53160-T1.exon1Aspergillus niger N402exon
ATCC64974_53160-T1.exon2ATCC64974_53160-T1.exon2Aspergillus niger N402exon
ATCC64974_53160-T1.exon3ATCC64974_53160-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_53160-T1.cdsATCC64974_53160-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_53160-T1ATCC64974_53160-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR005606
DBxrefPFAM:PF03908
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3234706..3235990 +
Powered by Drupal