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ATCC64974_54680-T1, ATCC64974_54680-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_54680-T1
Unique NameATCC64974_54680-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3740797..3741687-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_54680-T1 ID=ATCC64974_54680-T1|Name=ATCC64974_54680-T1|organism=Aspergillus niger N402|type=mRNA|length=891bp|location=Sequence derived from alignment at OGUI01000007.1:3740797..3741687- (Aspergillus niger N402)
ATGTCGCCCATCTCCGTCTTCCGCATCGCGACCCGCGCCGTCCGCCCTTC
CGGCTTCATCAGAGCGGCTCAATTGCCCCGTCCCCGGGTGCAGGCCCCCG
TTGCTCTGGCTATCGCCCGTCCCAGCTTCAGCACCTCCGCTAAGCGCTTC
GGCGGTCACCACGAGGACGAGACATACGAGGAGTTCTCTGCCAGGTATGC
AACTATCTCCCATGAAGCCATTGGGTTCCGACGCTCCCTGCGGTGCACGA
TTCCCAATCACAGGGATTCCCACTACCAGTTCCCCGAGACAATTCACACA
TCTTTCTTGATAATACCACACCAACCCGCGAGTTCCGCCCATATAACTAA
CCACATCTGCCGGTAGATTCGAGAAGGAATTCGACGGTGTTCAGGATGTC
TTCGAGCTCCAGGTAAGCTAATCTGCCCATATTGCATGATTCCAATTCGT
CCCTATCAATTCCCTTCCCCATAATCAGCAAAGCTGCCATTGGCAGATAA
AACCGGACCGTCCGCAGCCCCTTGGCGCCATATCAGACACCTTTGCTGAC
AAGTTACTGTTCTCCCATCCAGCGTAATCTCAACAACTGCTTCGCCTACG
ATCTCGTTCCCTCCGTTGAGGTCCTTACCGCTGCTCTGAAGGCTGCTCGT
CGCGTCAACGACTACCCCACCGCTGTCCGGATCTTCGAGGGTGCGCTTCC
TCCTCCCCATTCCATCACCGTTTCCTTCCCATGACAATTGAACTTACAAT
GTTTTTCTTTCTCTACAAATAGGTGTCAAGGCCAAGGTCGAGACTCAGGA
GCAGTACAAGCAATACCTTGAGGCCCTTGAGGGTCTCCGCCAGGAGCTGG
GTGTTGCTCTCCGTGAGGAGCTCTACCCCGAGGAGGCGTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:3740797..3741687-

>ATCC64974_54680-T1 ID=ATCC64974_54680-T1|Name=ATCC64974_54680-T1|organism=Aspergillus niger N402|type=CDS|length=1908bp|location=Sequence derived from alignment at OGUI01000007.1:3740797..3741687- (Aspergillus niger N402)
GTGTCAAGGCCAAGGTCGAGACTCAGGAGCAGTACAAGCAATACCTTGAG
GCCCTTGAGGGTCTCCGCCAGGAGCTGGGTGTTGCTCTCCGTGAGGAGCT
CTACCCCGAGGAGGCGTAACGTAATCTCAACAACTGCTTCGCCTACGATC
TCGTTCCCTCCGTTGAGGTCCTTACCGCTGCTCTGAAGGCTGCTCGTCGC
GTCAACGACTACCCCACCGCTGTCCGGATCTTCGAGGATTCGAGAAGGAA
TTCGACGGTGTTCAGGATGTCTTCGAGCTCCAGATGTCGCCCATCTCCGT
CTTCCGCATCGCGACCCGCGCCGTCCGCCCTTCCGGCTTCATCAGAGCGG
CTCAATTGCCCCGTCCCCGGGTGCAGGCCCCCGTTGCTCTGGCTATCGCC
CGTCCCAGCTTCAGCACCTCCGCTAAGCGCTTCGGCGGTCACCACGAGGA
CGAGACATACGAGGAGTTCTCTGCCAGGTGTCAAGGCCAAGGTCGAGACT
CAGGAGCAGTACAAGCAATACCTTGAGGCCCTTGAGGGTCTCCGCCAGGA
GCTGGGTGTTGCTCTCCGTGAGGAGCTCTACCCCGAGGAGGCGTAACGTA
ATCTCAACAACTGCTTCGCCTACGATCTCGTTCCCTCCGTTGAGGTCCTT
ACCGCTGCTCTGAAGGCTGCTCGTCGCGTCAACGACTACCCCACCGCTGT
CCGGATCTTCGAGGATTCGAGAAGGAATTCGACGGTGTTCAGGATGTCTT
CGAGCTCCAGATGTCGCCCATCTCCGTCTTCCGCATCGCGACCCGCGCCG
TCCGCCCTTCCGGCTTCATCAGAGCGGCTCAATTGCCCCGTCCCCGGGTG
CAGGCCCCCGTTGCTCTGGCTATCGCCCGTCCCAGCTTCAGCACCTCCGC
TAAGCGCTTCGGCGGTCACCACGAGGACGAGACATACGAGGAGTTCTCTG
CCAGGTGTCAAGGCCAAGGTCGAGACTCAGGAGCAGTACAAGCAATACCT
TGAGGCCCTTGAGGGTCTCCGCCAGGAGCTGGGTGTTGCTCTCCGTGAGG
AGCTCTACCCCGAGGAGGCGTAACGTAATCTCAACAACTGCTTCGCCTAC
GATCTCGTTCCCTCCGTTGAGGTCCTTACCGCTGCTCTGAAGGCTGCTCG
TCGCGTCAACGACTACCCCACCGCTGTCCGGATCTTCGAGGATTCGAGAA
GGAATTCGACGGTGTTCAGGATGTCTTCGAGCTCCAGATGTCGCCCATCT
CCGTCTTCCGCATCGCGACCCGCGCCGTCCGCCCTTCCGGCTTCATCAGA
GCGGCTCAATTGCCCCGTCCCCGGGTGCAGGCCCCCGTTGCTCTGGCTAT
CGCCCGTCCCAGCTTCAGCACCTCCGCTAAGCGCTTCGGCGGTCACCACG
AGGACGAGACATACGAGGAGTTCTCTGCCAGGTGTCAAGGCCAAGGTCGA
GACTCAGGAGCAGTACAAGCAATACCTTGAGGCCCTTGAGGGTCTCCGCC
AGGAGCTGGGTGTTGCTCTCCGTGAGGAGCTCTACCCCGAGGAGGCGTAA
CGTAATCTCAACAACTGCTTCGCCTACGATCTCGTTCCCTCCGTTGAGGT
CCTTACCGCTGCTCTGAAGGCTGCTCGTCGCGTCAACGACTACCCCACCG
CTGTCCGGATCTTCGAGGATTCGAGAAGGAATTCGACGGTGTTCAGGATG
TCTTCGAGCTCCAGATGTCGCCCATCTCCGTCTTCCGCATCGCGACCCGC
GCCGTCCGCCCTTCCGGCTTCATCAGAGCGGCTCAATTGCCCCGTCCCCG
GGTGCAGGCCCCCGTTGCTCTGGCTATCGCCCGTCCCAGCTTCAGCACCT
CCGCTAAGCGCTTCGGCGGTCACCACGAGGACGAGACATACGAGGAGTTC
TCTGCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005743mitochondrial inner membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
COX6ATCC64974_54680Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54680-T1ATCC64974_54680-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54680-T1.cdsATCC64974_54680-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_54680-T1.exon4ATCC64974_54680-T1.exon4Aspergillus niger N402exon
ATCC64974_54680-T1.exon3ATCC64974_54680-T1.exon3Aspergillus niger N402exon
ATCC64974_54680-T1.exon2ATCC64974_54680-T1.exon2Aspergillus niger N402exon
ATCC64974_54680-T1.exon1ATCC64974_54680-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG0926522L
DBxrefInterPro:IPR003204
DBxrefInterPro:IPR036545
DBxrefPFAM:PF02284
ProductCytochrome c oxidase subunit 6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3740797..3741687 -
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