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ATCC64974_55100-T1, ATCC64974_55100-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_55100-T1
Unique NameATCC64974_55100-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3896271..3897240+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_55100-T1 ID=ATCC64974_55100-T1|Name=ATCC64974_55100-T1|organism=Aspergillus niger N402|type=mRNA|length=970bp|location=Sequence derived from alignment at OGUI01000007.1:3896271..3897240+ (Aspergillus niger N402)
ATGCCTCCCCGCATTCTACTCCAGCCTTCATTGAGGGCCCTCACAGGTAA
ATACTATCTTGTTGCTCCTCCCTCCTGATTCGCGCCTAGTAACTCACCGG
GTTGTCGTTATCCCAGGCCCTTCCTCCGTGCAGCTCCCATTTGCAGCATT
GTCGCTCAACCCGGCGAAAACCTCCGTAAGAGCTGGGTCTACAGAGTCTC
GAGAGCGCAGACGCCATGACCCTTTCCTTATGGCGCAATCTCGCCAACGC
AAGGCCGCCAACATCTCTCGCCAGAAAGCCCTCACCAAAGAGCGCGAAGG
GTCTGTCGGAGACCCCGTCCAAAGCGAACCTACACCCTTTATCCAGGAAC
TCAGAAAGACCCAAGCGACTTTGCAGGACACAGACCTCAATTACTTCGTC
ACACCGGATGGTCTCAATGAGGCGATGGAGTACTCGAAGAACCTGACATC
ACCGATTCGGAACCCGGACCGCGACACTGCTGATCCTCAGCTCGAGAAAG
AAGCGGCTGAGAAGCATCTTCAAGAACATCGGAATGCACAGGAAGCCATC
CGTCGTATTGTCAGTGTCGCCAACGGAAACACAAAGGACCACATGCGGCT
TCACATCCAGAAATGCATTGAGACCTTTGGCCGGCATAAGACCGACAGCG
TATTGCCGCCCAAGCCATCTGGCGTATCGCATGACTCTGCGACTGTTCAT
CTTGAGAAAACTCCCCGCGTTGGTCCGGATACTGGCTCTCCGGAAGTACA
GGTTGCCATTCTCACTGCAAAGATCATGAACTTGTCTAGACATCTCCAGA
CGACGAAAAAGGACCGACACAACAAGCGCAACTTGCGTCTACTTGTTCAC
AAGAGACAGAAGTTGCTTCGTTACTTGCGGAGGAAGGAAAGAGGTGGTCC
CCGGTGGCAGAATCTGATGGAGAAGCTGGGTCTCTCGGAAGCTGCTTGGA
AGGGTGAGATCTCCATGTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:3896271..3897240+

>ATCC64974_55100-T1 ID=ATCC64974_55100-T1|Name=ATCC64974_55100-T1|organism=Aspergillus niger N402|type=CDS|length=1800bp|location=Sequence derived from alignment at OGUI01000007.1:3896271..3897240+ (Aspergillus niger N402)
ATGCCTCCCCGCATTCTACTCCAGCCTTCATTGAGGGCCCTCACAGGCCC
TTCCTCCGTGCAGCTCCCATTTGCAGCATTGTCGCTCAACCCGGCGAAAA
CCTCCGTAAGAGCTGGGTCTACAGAGTCTCGAGAGCGCAGACGCCATGAC
CCTTTCCTTATGGCGCAATCTCGCCAACGCAAGGCCGCCAACATCTCTCG
CCAGAAAGCCCTCACCAAAGAGCGCGAAGGGTCTGTCGGAGACCCCGTCC
AAAGCGAACCTACACCCTTTATCCAGGAACTCAGAAAGACCCAAGCGACT
TTGCAGGACACAGACCTCAATTACTTCGTCACACCGGATGGTCTCAATGA
GGCGATGGAGTACTCGAAGAACCTGACATCACCGATTCGGAACCCGGACC
GCGACACTGCTGATCCTCAGCTCGAGAAAGAAGCGGCTGAGAAGCATCTT
CAAGAACATCGGAATGCACAGGAAGCCATCCGTCGTATTGTCAGTGTCGC
CAACGGAAACACAAAGGACCACATGCGGCTTCACATCCAGAAATGCATTG
AGACCTTTGGCCGGCATAAGACCGACAGCGTATTGCCGCCCAAGCCATCT
GGCGTATCGCATGACTCTGCGACTGTTCATCTTGAGAAAACTCCCCGCGT
TGGTCCGGATACTGGCTCTCCGGAAGTACAGGTTGCCATTCTCACTGCAA
AGATCATGAACTTGTCTAGACATCTCCAGACGACGAAAAAGGACCGACAC
AACAAGCGCAACTTGCGTCTACTTGTTCACAAGAGACAGAAGTTGCTTCG
TTACTTGCGGAGGAAGGAAAGAGGTGGTCCCCGGTGGCAGAATCTGATGG
AGAAGCTGGGTCTCTCGGAAGCTGCTTGGAAGGGTGAGATCTCCATGTAA
ATGCCTCCCCGCATTCTACTCCAGCCTTCATTGAGGGCCCTCACAGGCCC
TTCCTCCGTGCAGCTCCCATTTGCAGCATTGTCGCTCAACCCGGCGAAAA
CCTCCGTAAGAGCTGGGTCTACAGAGTCTCGAGAGCGCAGACGCCATGAC
CCTTTCCTTATGGCGCAATCTCGCCAACGCAAGGCCGCCAACATCTCTCG
CCAGAAAGCCCTCACCAAAGAGCGCGAAGGGTCTGTCGGAGACCCCGTCC
AAAGCGAACCTACACCCTTTATCCAGGAACTCAGAAAGACCCAAGCGACT
TTGCAGGACACAGACCTCAATTACTTCGTCACACCGGATGGTCTCAATGA
GGCGATGGAGTACTCGAAGAACCTGACATCACCGATTCGGAACCCGGACC
GCGACACTGCTGATCCTCAGCTCGAGAAAGAAGCGGCTGAGAAGCATCTT
CAAGAACATCGGAATGCACAGGAAGCCATCCGTCGTATTGTCAGTGTCGC
CAACGGAAACACAAAGGACCACATGCGGCTTCACATCCAGAAATGCATTG
AGACCTTTGGCCGGCATAAGACCGACAGCGTATTGCCGCCCAAGCCATCT
GGCGTATCGCATGACTCTGCGACTGTTCATCTTGAGAAAACTCCCCGCGT
TGGTCCGGATACTGGCTCTCCGGAAGTACAGGTTGCCATTCTCACTGCAA
AGATCATGAACTTGTCTAGACATCTCCAGACGACGAAAAAGGACCGACAC
AACAAGCGCAACTTGCGTCTACTTGTTCACAAGAGACAGAAGTTGCTTCG
TTACTTGCGGAGGAAGGAAAGAGGTGGTCCCCGGTGGCAGAATCTGATGG
AGAAGCTGGGTCTCTCGGAAGCTGCTTGGAAGGGTGAGATCTCCATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_55100ATCC64974_55100Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55100-T1.exon1ATCC64974_55100-T1.exon1Aspergillus niger N402exon
ATCC64974_55100-T1.exon2ATCC64974_55100-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55100-T1.cdsATCC64974_55100-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55100-T1ATCC64974_55100-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG092643JW
DBxrefInterPro:IPR009068
DBxrefInterPro:IPR005290
DBxrefInterPro:IPR000589
DBxrefPFAM:PF00312
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3896271..3897240 +
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