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ATCC64974_56010-T1, ATCC64974_56010-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_56010-T1
Unique NameATCC64974_56010-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4213804..4214525+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_56010-T1 ID=ATCC64974_56010-T1|Name=ATCC64974_56010-T1|organism=Aspergillus niger N402|type=mRNA|length=722bp|location=Sequence derived from alignment at OGUI01000007.1:4213804..4214525+ (Aspergillus niger N402)
ATGGGTTCCGTCGTTCTGCCACATCTGCGTACAGCCTGGCACGTCGACCA
GGCTATCCTTTCCGAGGAGGACAGACTTGTGGTGTGTATACATATCACCA
AGTCATGGCTGCGAAGCATATCATATCATACTAACCAAACGTATAAAGGT
CATCCGATTCGGTCGCGATCACGATGTCGACTGTACGACGTCACAAATCT
CCCTGATCACACTATGGGTGTAAGCTAACGCAGTGAATCGCAGGCATGCG
TCAGGACGAAGTCCTTTTCAAGATCGCTGAACGTGTGAAGAGTACGTCAA
GAAATCCTTTATCCATTCCTCCTTCCCAAAACGACTTTCTCCGGCAAGAA
GAAATTCGCAGTGACTAACCCCCAACCAGACTTCGCCGTAATCTACCTCT
GCGACATCGACGAGGTACCCGAGTTCAACACGATGTACGAACTCTTCGAC
CCAATGACCATCATGTTTTTCTACCGGAATAAGCACATGATGTGCGATTT
CGGCACAGGTAACAACAACAAGTTGAACTGGGTGCTTGAAGACAAGCAGG
AGATGATCGATATCATCGAGACCATCTACAAGGGCGCGAAGAAGGGACGT
GGTCTGGTCGTCAGCCCGAAGGGTAAGTCTATATACTGTCTTGATTGTCT
TCTTACTGGCTGGATGGTTTTGGCTGATGCATGATATCTGCTGTAGATTA
CTCGACGAGGTACCGTTACTGA
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Coding sequence (CDS) from alignment at OGUI01000007.1:4213804..4214525+

>ATCC64974_56010-T1 ID=ATCC64974_56010-T1|Name=ATCC64974_56010-T1|organism=Aspergillus niger N402|type=CDS|length=2160bp|location=Sequence derived from alignment at OGUI01000007.1:4213804..4214525+ (Aspergillus niger N402)
ATGGGTTCCGTCGTTCTGCCACATCTGCGTACAGCCTGGCACGTCGACCA
GGCTATCCTTTCCGAGGAGGACAGACTTGTGGTCATCCGATTCGGTCGCG
ATCACGATGTCGACTGCATGCGTCAGGACGAAGTCCTTTTCAAGATCGCT
GAACGTGTGAAGAACTTCGCCGTAATCTACCTCTGCGACATCGACGAGGT
ACCCGAGTTCAACACGATGTACGAACTCTTCGACCCAATGACCATCATGT
TTTTCTACCGGAATAAGCACATGATGTGCGATTTCGGCACAGGTAACAAC
AACAAGTTGAACTGGGTGCTTGAAGACAAGCAGGAGATGATCGATATCAT
CGAGACCATCTACAAGGGCGCGAAGAAGGGACGTGGTCTGGTCGTCAGCC
CGAAGGATTACTCGACGAGGTACCGTTACTGAATGGGTTCCGTCGTTCTG
CCACATCTGCGTACAGCCTGGCACGTCGACCAGGCTATCCTTTCCGAGGA
GGACAGACTTGTGGTCATCCGATTCGGTCGCGATCACGATGTCGACTGCA
TGCGTCAGGACGAAGTCCTTTTCAAGATCGCTGAACGTGTGAAGAACTTC
GCCGTAATCTACCTCTGCGACATCGACGAGGTACCCGAGTTCAACACGAT
GTACGAACTCTTCGACCCAATGACCATCATGTTTTTCTACCGGAATAAGC
ACATGATGTGCGATTTCGGCACAGGTAACAACAACAAGTTGAACTGGGTG
CTTGAAGACAAGCAGGAGATGATCGATATCATCGAGACCATCTACAAGGG
CGCGAAGAAGGGACGTGGTCTGGTCGTCAGCCCGAAGGATTACTCGACGA
GGTACCGTTACTGAATGGGTTCCGTCGTTCTGCCACATCTGCGTACAGCC
TGGCACGTCGACCAGGCTATCCTTTCCGAGGAGGACAGACTTGTGGTCAT
CCGATTCGGTCGCGATCACGATGTCGACTGCATGCGTCAGGACGAAGTCC
TTTTCAAGATCGCTGAACGTGTGAAGAACTTCGCCGTAATCTACCTCTGC
GACATCGACGAGGTACCCGAGTTCAACACGATGTACGAACTCTTCGACCC
AATGACCATCATGTTTTTCTACCGGAATAAGCACATGATGTGCGATTTCG
GCACAGGTAACAACAACAAGTTGAACTGGGTGCTTGAAGACAAGCAGGAG
ATGATCGATATCATCGAGACCATCTACAAGGGCGCGAAGAAGGGACGTGG
TCTGGTCGTCAGCCCGAAGGATTACTCGACGAGGTACCGTTACTGAATGG
GTTCCGTCGTTCTGCCACATCTGCGTACAGCCTGGCACGTCGACCAGGCT
ATCCTTTCCGAGGAGGACAGACTTGTGGTCATCCGATTCGGTCGCGATCA
CGATGTCGACTGCATGCGTCAGGACGAAGTCCTTTTCAAGATCGCTGAAC
GTGTGAAGAACTTCGCCGTAATCTACCTCTGCGACATCGACGAGGTACCC
GAGTTCAACACGATGTACGAACTCTTCGACCCAATGACCATCATGTTTTT
CTACCGGAATAAGCACATGATGTGCGATTTCGGCACAGGTAACAACAACA
AGTTGAACTGGGTGCTTGAAGACAAGCAGGAGATGATCGATATCATCGAG
ACCATCTACAAGGGCGCGAAGAAGGGACGTGGTCTGGTCGTCAGCCCGAA
GGATTACTCGACGAGGTACCGTTACTGAATGGGTTCCGTCGTTCTGCCAC
ATCTGCGTACAGCCTGGCACGTCGACCAGGCTATCCTTTCCGAGGAGGAC
AGACTTGTGGTCATCCGATTCGGTCGCGATCACGATGTCGACTGCATGCG
TCAGGACGAAGTCCTTTTCAAGATCGCTGAACGTGTGAAGAACTTCGCCG
TAATCTACCTCTGCGACATCGACGAGGTACCCGAGTTCAACACGATGTAC
GAACTCTTCGACCCAATGACCATCATGTTTTTCTACCGGAATAAGCACAT
GATGTGCGATTTCGGCACAGGTAACAACAACAAGTTGAACTGGGTGCTTG
AAGACAAGCAGGAGATGATCGATATCATCGAGACCATCTACAAGGGCGCG
AAGAAGGGACGTGGTCTGGTCGTCAGCCCGAAGGATTACTCGACGAGGTA
CCGTTACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0046540U4/U6 x U5 tri-snRNP complex
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DIM1ATCC64974_56010Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56010-T1ATCC64974_56010-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56010-T1.exon1ATCC64974_56010-T1.exon1Aspergillus niger N402exon
ATCC64974_56010-T1.exon2ATCC64974_56010-T1.exon2Aspergillus niger N402exon
ATCC64974_56010-T1.exon3ATCC64974_56010-T1.exon3Aspergillus niger N402exon
ATCC64974_56010-T1.exon4ATCC64974_56010-T1.exon4Aspergillus niger N402exon
ATCC64974_56010-T1.exon5ATCC64974_56010-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56010-T1.cdsATCC64974_56010-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
NoteBUSCO:EOG0926506U
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR004123
DBxrefPFAM:PF02966
ProductDimethyladenosine transferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4213804..4214525 +
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