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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000007.1:4357156..4357798- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_56530-T1 ID=ATCC64974_56530-T1|Name=ATCC64974_56530-T1|organism=Aspergillus niger N402|type=mRNA|length=643bp|location=Sequence derived from alignment at OGUI01000007.1:4357156..4357798- (Aspergillus niger N402)
ATGCCATTGACACGTTCCTCCGATCCCCTAGTGTGGATCGACTGCGAGGT
GCGGCATTCCTCTGCTTTTACCCCTCTACCAGCCGCGACTGACGAACCCC
TCCAACATTTCGATCGGCGTGTAGATGACCGGCCTTGACGCGGACACCGA
CCAAATCCTCCAAATCTGTTGCTTCATCACCGACGCCAATCTCAACCTCC
TCGAGCCCCAGGGCTTCGAAACCGTCATCCACCATCCGACCTCAGTCCTA
GACAACATGAACGCATGGTGCATCGAGACCCACGGTCGCACAGGGCTAAC
GGCGGCCGTGCAGGCCTCGACCACCACCGCGGAGGAGGCTGCGACGGCTC
TTTTGGCCTATATCCAGAAATACGTGCCACAACCCCGGCGAGGGTTGCTG
GCGGGGAACAGTGTACACGCCGACAAGGCGTTTCTGGCTAAGGGACCATA
CCAAGCGGTGCTAGACTGGCTACACTATCGGATCGTGGACGTGAGCGCAC
TCAAGGAGATGGTACGACGGTGGGGCTCAGAAGAGCTACTAGAATCCGTG
CCAGGGAAGAAGGAGGTTCATCTTGCGCGGGACGATATTCTGGAAAGCAT
CGAAGAGATGCGATTCTACCGGGGGCGATTGTTCGGATTCTAG back to topCoding sequence (CDS) from alignment at OGUI01000007.1:4357156..4357798- >ATCC64974_56530-T1 ID=ATCC64974_56530-T1|Name=ATCC64974_56530-T1|organism=Aspergillus niger N402|type=CDS|length=1134bp|location=Sequence derived from alignment at OGUI01000007.1:4357156..4357798- (Aspergillus niger N402)
ATGACCGGCCTTGACGCGGACACCGACCAAATCCTCCAAATCTGTTGCTT
CATCACCGACGCCAATCTCAACCTCCTCGAGCCCCAGGGCTTCGAAACCG
TCATCCACCATCCGACCTCAGTCCTAGACAACATGAACGCATGGTGCATC
GAGACCCACGGTCGCACAGGGCTAACGGCGGCCGTGCAGGCCTCGACCAC
CACCGCGGAGGAGGCTGCGACGGCTCTTTTGGCCTATATCCAGAAATACG
TGCCACAACCCCGGCGAGGGTTGCTGGCGGGGAACAGTGTACACGCCGAC
AAGGCGTTTCTGGCTAAGGGACCATACCAAGCGGTGCTAGACTGGCTACA
CTATCGGATCGTGGACGTGAGCGCACTCAAGGAGATGGTACGACGGTGGG
GCTCAGAAGAGCTACTAGAATCCGTGCCAGGGAAGAAGGAGGTTCATCTT
GCGCGGGACGATATTCTGGAAAGCATCGAAGAGATGCGATTCTACCGGGG
GCGATTGTTCGGATTCTAGATGCCATTGACACGTTCCTCCGATCCCCTAG
TGTGGATCGACTGCGAGATGACCGGCCTTGACGCGGACACCGACCAAATC
CTCCAAATCTGTTGCTTCATCACCGACGCCAATCTCAACCTCCTCGAGCC
CCAGGGCTTCGAAACCGTCATCCACCATCCGACCTCAGTCCTAGACAACA
TGAACGCATGGTGCATCGAGACCCACGGTCGCACAGGGCTAACGGCGGCC
GTGCAGGCCTCGACCACCACCGCGGAGGAGGCTGCGACGGCTCTTTTGGC
CTATATCCAGAAATACGTGCCACAACCCCGGCGAGGGTTGCTGGCGGGGA
ACAGTGTACACGCCGACAAGGCGTTTCTGGCTAAGGGACCATACCAAGCG
GTGCTAGACTGGCTACACTATCGGATCGTGGACGTGAGCGCACTCAAGGA
GATGGTACGACGGTGGGGCTCAGAAGAGCTACTAGAATCCGTGCCAGGGA
AGAAGGAGGTTCATCTTGCGCGGGACGATATTCTGGAAAGCATCGAAGAG
ATGCGATTCTACCGGGGGCGATTGTTCGGATTCTAGATGCCATTGACACG
TTCCTCCGATCCCCTAGTGTGGATCGACTGCGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000175 | 3'-5'-exoribonuclease activity |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_56530-T1 | ATCC64974_56530-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264V2U |
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR022894 |
| DBxref | InterPro:IPR036397 |
| DBxref | InterPro:IPR013520 |
| DBxref | PFAM:PF00929 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000007.1 | supercontig | OGUI01000007.1:4357156..4357798 - |
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