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ATCC64974_56570-T1, ATCC64974_56570-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_56570-T1
Unique NameATCC64974_56570-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4370438..4372197-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_56570-T1 ID=ATCC64974_56570-T1|Name=ATCC64974_56570-T1|organism=Aspergillus niger N402|type=mRNA|length=1760bp|location=Sequence derived from alignment at OGUI01000007.1:4370438..4372197- (Aspergillus niger N402)
ATGACGAAAGACGATTACCGCTGGCACATGTACGACACAGTCAAGGGCTC
AGACTGGCTAGGAGACCAAGATGCAATCCACTATATGACAAGAGAAGCAC
CGAAGGCTATATACGAGCTGGAGAACTACGGCATGGCGTTTTCCAGAACA
GAAGATGGTCGCATATACCAGCGGGCTCTTGGGGGACAGAGTCTGGATTA
TGGGAAAGGAGGGCAGGCGTATCGGACTGCTTGTGCGGCGGATCGGACGG
GTCATGCCATGTTGCATGCTCTGTATGGGGAGGCGTTGAAGGTATATCAC
GCCATCATAATATACTGTAGAAATGATGAACCCTGGTTCAATATAGTACT
CTGGCAGAGACTGACTGACTGACGGATGTGTTTAAACTCCAGCACGATAC
CAAATTCTTCGTTGAATTCTTCGCCCTTGATCTTCTCATGGTCGACGGTG
CCTGCGTTGGGGTCATCTGCCTCTCTCTTGAAGACGGCACGCTGCATCGC
TTTTTTGCGCGAAACACTGTCCTCGCGACGGGCGGTTACGGCCGGGCTTA
CTTCTCCTGCACGTCTGCACATACTTCTACCGGAGATGGTAATGCCATGG
TTGCCCGCGCGGGTCTTCCTAACCAGGATATGGAGTTCGTGCAGTTCCAC
CCTTCTGAGATCCATGGCGCCGGGGTGCTCATCACGGAAGGTGCTCGCGG
GGAGGGCGGATATCTCCTCAATGCGCACGGCGAACGCTTCATGGAGCGGT
ATGCCCCGACAGCTAAAGACCTGGCTAGTCGGGATGTAGTAGCAAGAGCC
ATGAATCTTGAGATCCGCGAGGGCCGGGGCTGTGGCCCGGATAAGGATCA
TATCCATCTCCAGCTGTCTCATTTACCTGCCGAGCTCATTCGTTCACGAC
TCCCTGGGATTCTTGAGACGGCGTCAATTTTCGCGGGGATTGACATTACT
CGGGATCCTATTCCTGTTGTTCCTACGGTTCATTACTGCATGGGCGGGAT
ACCGACGAACTATAAAGGCCAGGTGCTTACTAGTAGTAGCCACACTTCCT
CGGGGACAAACATCCCAGATGCAGAGGTAGAACCCGTCCCAGGCCTCTAC
GCAGCCGGCGAATGTGCCAGTGTCAGCGTGCACGGCGCCAACCGACTCGG
CGCAAACTCGCTCCTGGACATAGTTGTCTTCGGCCGGGCGTGTGCACTCC
ACATCGCCGAGACCAACGAACCCAACATGCCGCTTCACAATATCCCACAT
GATGATACTCCTCCGGCAAGCCTAGGCCAAGACTCTCTATCAAGCCTATC
CACGACCCTCCACGCAACAGGCGACCTCCCGTCTTCATCACTACGCCACA
ACCTCCAACGAGCCATGCAAACGGACCTCGCTGTGTTCCGCACGCACGAA
TCCCTTACCAGAGGACTAAGTAAAGTGATCCAAGTGCAGAATGATTTCTC
CACGCGACTCAGAACAAGCGATAGAAGTCTAATCTGGAATTCAGACCTAG
TAGAGACACTGGAGTTGAGGAATCTGCTGACGTGCGCGGCGCAGACGGCT
ATGGCGGCGTTGTGTAGGACGGAGAGTCGGGGGAGTCATGCGAGGGAGGA
TTTCCCGGAGAGGAACGATGAGGGGTGGTTGAAGCATAGTTGGACGTGGC
AGAAGGACGAAAAAGAGGAGGGGGTTCGGGTGGGGTATCGGGGGGTGATT
ATGAAGACGTTGGATGAGGGGGATTGTAAGAGTGTGCCGCCGGTGAAGAG
GAGCTACTGA
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Coding sequence (CDS) from alignment at OGUI01000007.1:4370438..4372197-

>ATCC64974_56570-T1 ID=ATCC64974_56570-T1|Name=ATCC64974_56570-T1|organism=Aspergillus niger N402|type=CDS|length=3318bp|location=Sequence derived from alignment at OGUI01000007.1:4370438..4372197- (Aspergillus niger N402)
CACGATACCAAATTCTTCGTTGAATTCTTCGCCCTTGATCTTCTCATGGT
CGACGGTGCCTGCGTTGGGGTCATCTGCCTCTCTCTTGAAGACGGCACGC
TGCATCGCTTTTTTGCGCGAAACACTGTCCTCGCGACGGGCGGTTACGGC
CGGGCTTACTTCTCCTGCACGTCTGCACATACTTCTACCGGAGATGGTAA
TGCCATGGTTGCCCGCGCGGGTCTTCCTAACCAGGATATGGAGTTCGTGC
AGTTCCACCCTTCTGAGATCCATGGCGCCGGGGTGCTCATCACGGAAGGT
GCTCGCGGGGAGGGCGGATATCTCCTCAATGCGCACGGCGAACGCTTCAT
GGAGCGGTATGCCCCGACAGCTAAAGACCTGGCTAGTCGGGATGTAGTAG
CAAGAGCCATGAATCTTGAGATCCGCGAGGGCCGGGGCTGTGGCCCGGAT
AAGGATCATATCCATCTCCAGCTGTCTCATTTACCTGCCGAGCTCATTCG
TTCACGACTCCCTGGGATTCTTGAGACGGCGTCAATTTTCGCGGGGATTG
ACATTACTCGGGATCCTATTCCTGTTGTTCCTACGGTTCATTACTGCATG
GGCGGGATACCGACGAACTATAAAGGCCAGGTGCTTACTAGTAGTAGCCA
CACTTCCTCGGGGACAAACATCCCAGATGCAGAGGTAGAACCCGTCCCAG
GCCTCTACGCAGCCGGCGAATGTGCCAGTGTCAGCGTGCACGGCGCCAAC
CGACTCGGCGCAAACTCGCTCCTGGACATAGTTGTCTTCGGCCGGGCGTG
TGCACTCCACATCGCCGAGACCAACGAACCCAACATGCCGCTTCACAATA
TCCCACATGATGATACTCCTCCGGCAAGCCTAGGCCAAGACTCTCTATCA
AGCCTATCCACGACCCTCCACGCAACAGGCGACCTCCCGTCTTCATCACT
ACGCCACAACCTCCAACGAGCCATGCAAACGGACCTCGCTGTGTTCCGCA
CGCACGAATCCCTTACCAGAGGACTAAGTAAAGTGATCCAAGTGCAGAAT
GATTTCTCCACGCGACTCAGAACAAGCGATAGAAGTCTAATCTGGAATTC
AGACCTAGTAGAGACACTGGAGTTGAGGAATCTGCTGACGTGCGCGGCGC
AGACGGCTATGGCGGCGTTGTGTAGGACGGAGAGTCGGGGGAGTCATGCG
AGGGAGGATTTCCCGGAGAGGAACGATGAGGGGTGGTTGAAGCATAGTTG
GACGTGGCAGAAGGACGAAAAAGAGGAGGGGGTTCGGGTGGGGTATCGGG
GGGTGATTATGAAGACGTTGGATGAGGGGGATTGTAAGAGTGTGCCGCCG
GTGAAGAGGAGCTACTGAATGACGAAAGACGATTACCGCTGGCACATGTA
CGACACAGTCAAGGGCTCAGACTGGCTAGGAGACCAAGATGCAATCCACT
ATATGACAAGAGAAGCACCGAAGGCTATATACGAGCTGGAGAACTACGGC
ATGGCGTTTTCCAGAACAGAAGATGGTCGCATATACCAGCGGGCTCTTGG
GGGACAGAGTCTGGATTATGGGAAAGGAGGGCAGGCGTATCGGACTGCTT
GTGCGGCGGATCGGACGGGTCATGCCATGTTGCATGCTCTGTATGGGGAG
GCGTTGAAGCACGATACCAAATTCTTCGTTGAATTCTTCGCCCTTGATCT
TCTCATGGTCGACGGTGCCTGCGTTGGGGTCATCTGCCTCTCTCTTGAAG
ACGGCACGCTGCATCGCTTTTTTGCGCGAAACACTGTCCTCGCGACGGGC
GGTTACGGCCGGGCTTACTTCTCCTGCACGTCTGCACATACTTCTACCGG
AGATGGTAATGCCATGGTTGCCCGCGCGGGTCTTCCTAACCAGGATATGG
AGTTCGTGCAGTTCCACCCTTCTGAGATCCATGGCGCCGGGGTGCTCATC
ACGGAAGGTGCTCGCGGGGAGGGCGGATATCTCCTCAATGCGCACGGCGA
ACGCTTCATGGAGCGGTATGCCCCGACAGCTAAAGACCTGGCTAGTCGGG
ATGTAGTAGCAAGAGCCATGAATCTTGAGATCCGCGAGGGCCGGGGCTGT
GGCCCGGATAAGGATCATATCCATCTCCAGCTGTCTCATTTACCTGCCGA
GCTCATTCGTTCACGACTCCCTGGGATTCTTGAGACGGCGTCAATTTTCG
CGGGGATTGACATTACTCGGGATCCTATTCCTGTTGTTCCTACGGTTCAT
TACTGCATGGGCGGGATACCGACGAACTATAAAGGCCAGGTGCTTACTAG
TAGTAGCCACACTTCCTCGGGGACAAACATCCCAGATGCAGAGGTAGAAC
CCGTCCCAGGCCTCTACGCAGCCGGCGAATGTGCCAGTGTCAGCGTGCAC
GGCGCCAACCGACTCGGCGCAAACTCGCTCCTGGACATAGTTGTCTTCGG
CCGGGCGTGTGCACTCCACATCGCCGAGACCAACGAACCCAACATGCCGC
TTCACAATATCCCACATGATGATACTCCTCCGGCAAGCCTAGGCCAAGAC
TCTCTATCAAGCCTATCCACGACCCTCCACGCAACAGGCGACCTCCCGTC
TTCATCACTACGCCACAACCTCCAACGAGCCATGCAAACGGACCTCGCTG
TGTTCCGCACGCACGAATCCCTTACCAGAGGACTAAGTAAAGTGATCCAA
GTGCAGAATGATTTCTCCACGCGACTCAGAACAAGCGATAGAAGTCTAAT
CTGGAATTCAGACCTAGTAGAGACACTGGAGTTGAGGAATCTGCTGACGT
GCGCGGCGCAGACGGCTATGGCGGCGTTGTGTAGGACGGAGAGTCGGGGG
AGTCATGCGAGGGAGGATTTCCCGGAGAGGAACGATGAGGGGTGGTTGAA
GCATAGTTGGACGTGGCAGAAGGACGAAAAAGAGGAGGGGGTTCGGGTGG
GGTATCGGGGGGTGATTATGAAGACGTTGGATGAGGGGGATTGTAAGAGT
GTGCCGCCGGTGAAGAGGAGCTACTGAATGACGAAAGACGATTACCGCTG
GCACATGTACGACACAGTCAAGGGCTCAGACTGGCTAGGAGACCAAGATG
CAATCCACTATATGACAAGAGAAGCACCGAAGGCTATATACGAGCTGGAG
AACTACGGCATGGCGTTTTCCAGAACAGAAGATGGTCGCATATACCAGCG
GGCTCTTGGGGGACAGAGTCTGGATTATGGGAAAGGAGGGCAGGCGTATC
GGACTGCTTGTGCGGCGGATCGGACGGGTCATGCCATGTTGCATGCTCTG
TATGGGGAGGCGTTGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
GO:0055114oxidation-reduction process
GO:0022900electron transport chain
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660flavin adenine dinucleotide binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SDH1_2ATCC64974_56570Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56570-T1ATCC64974_56570-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56570-T1.cdsATCC64974_56570-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_56570-T1.exon2ATCC64974_56570-T1.exon2Aspergillus niger N402exon
ATCC64974_56570-T1.exon1ATCC64974_56570-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR037099
DBxrefInterPro:IPR015939
DBxrefInterPro:IPR003953
DBxrefInterPro:IPR011281
DBxrefInterPro:IPR014006
DBxrefInterPro:IPR027477
DBxrefInterPro:IPR036188
DBxrefPFAM:PF02910
DBxrefPFAM:PF00890
Productsuccinate dehydrogenase flavoprotein subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4370438..4372197 -
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