ATCC64974_59240-T1, ATCC64974_59240-T1 (mRNA) Aspergillus niger N402

Overview


Name	ATCC64974_59240-T1
Unique Name	ATCC64974_59240-T1
Type	mRNA
Organism	Aspergillus niger N402

Sequences

The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:126564..128600-
coding sequence from alignment at OGUI01000008.1:126564..128600-

mRNA from alignment at OGUI01000008.1:126564..128600-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>ATCC64974_59240-T1 ID=ATCC64974_59240-T1|Name=ATCC64974_59240-T1|organism=Aspergillus niger N402|type=mRNA|length=2037bp|location=Sequence derived from alignment at OGUI01000008.1:126564..128600- (Aspergillus niger N402)
ATGCATGTTCCCCCCCCGTCCTCGATCCTGACCAGCATCCCCCCGAGGCT
TCAAGTCCAGGATCACCTTCACACCGAAGAGATCGTGATTGGATATCAAG
CTCTACTATATCTCTTCTAGGCGGAGTAAGGTCCCTGAACTCACTCACAC
CATGGGCCACTTTAACAATCATTCGAATAGGCATTCAGCCTTCACAATGT
GGCCGCACCGGGGCCTCCTGCAACCAACGCACTCCCGGGAGCCCCTTTGC
GTGAACCAGGATCTGCTTCCCCCAGCATTGAGGTTGAGACTTCTGACCTT
CCCTCCTCAACTGCACTCGCGCCTTATGATCCGTCCTCTTCCGTTCTGAA
TGTTTTGATGTCTCTACTGCCCAACTTTGATGCGGCCAGCCTTCTCGTAG
ATACGTATTTTGATCGAGTGCACTGGTTCATGTTGATCTTCTATCAAGAT
GAGTTCCGTCAACGGTGGCCCAAATTATACGGTCGCTCTACTGAGAGGCC
TCTAACATACGCCCACCGTCACCTCGGCTTTCTTAGCACCTTCCTGATCG
TAATCGCCATCGGGCTGCAGTACGCCGGGCCTTACCGACAAGGGATTCTC
TCGAGACATGGGGTCGACATCAACCTAAGGGATCGCATCCTCTTTACTGT
GAGATCGGGGCTTCTTGACATAATGTCCCTCGGCTCTTTAGAAGCAGTCC
AAACCTGCATTTTACTGGGTACATATTATTTATATCATGGTGCTCCACGA
CTGGCATGGCCGGTATGCGGATGTGGGCTTCGTATCGCCCAAGCTCTACA
TCTACACCGCCGACAGCACCCCGTCCAATCGACTGATTTCCGAACCCGCA
ATGAGACTCGCAAAAGATGCTGGTGGGCAGTGTATGAGATCGAAACCTTC
TCTGCTGTGGCATATGGCTATCCGCACAGTATCCGCGATGATGATTGCGA
CGTAGAACCGTTAGATCCATCAGCCAAGCTTCAGACTATGCAGTCTCCGG
GTTCATTTAATGAACCCTTGACGTCCGATCCAACGCTACTTTCCTACAAG
TACTTTATAACTAAACTGTCCACCATCACTAAAGGAGCCTTGGATGATCT
GTATCGCGTTCGCTCACATCCAGCTAGCCGATCTCATACAAATTCACCGG
ATATCCAAAGAATCGTTCGAAAGGTCGCCGACTACGATAACCGACTCCGC
CAGTGGGAAGCAGAGATCCCTTCCCCACTTCAGTGGCGCTGTGTTTCTCA
CCATTCTCATTATGCCTCCGCTGAAGAAGTCGATCGCGCTATTGGAGCCT
CGGGGCCTCGCTTCGAGAATCACATTTATCAACTCCAAGCTCTCGCTCTG
TGGCTTGCCTATCAGAACGCACGCATCCTCACACATCGTCCTCTTCTTTC
CTACACGCTTGCCACTAGAGAGCGAACCAGCAAGTACAATGGCGAGGCTG
CGTATTCGGTCGACCCATTCAGGGCCTCCTTAAACGCCTGTCGTGATGCA
GCGCTCAGCATGTCGGAGATCCTGTCTAGTCCGCTACTGGAAATTGTTCC
GGAAACCTATGCCGCTTCATTCGTTAGCATTCACACATTTACAGCAGGTG
TAACCCTTGGCATTCTCAGCAGCATGGATCCTCTGGGCCCACAGTCTGCT
GAGACGAAGTCCGGGCTCCGCAAACTGATCGGCATTCAGGACAAGCTCCG
AACACATTCAGTCGCAGCACAGCAGGGATTATCCATTCTTCAGCGGCTGG
CGAAATTAGTCTTGGAAAAAGAACTTAGTGTGATGATGGAATTGTCTACC
TCTACAACCACTGCGCGATCAGACGAGGCGACAATTACGGATTCTCCATC
AACTCAGAGAACATCGGGTCAGGTCTCCGATAGATCAATAGCTAGAAATG
ATATTATTGATCCTATCGAGGTGTCCACGGCAATCCCAGCCCTCGATATC
CCAGCTGAAGATGGCTCTGCCCAATACATGCACGATCCTGCTCTAACGGC
TGCCCTTCAAGATTTCGATCAAGGTATTGCTCCCTAA

Coding sequence (CDS) from alignment at OGUI01000008.1:126564..128600-

>ATCC64974_59240-T1 ID=ATCC64974_59240-T1|Name=ATCC64974_59240-T1|organism=Aspergillus niger N402|type=CDS|length=3882bp|location=Sequence derived from alignment at OGUI01000008.1:126564..128600- (Aspergillus niger N402)
GCATTCAGCCTTCACAATGTGGCCGCACCGGGGCCTCCTGCAACCAACGC
ACTCCCGGGAGCCCCTTTGCGTGAACCAGGATCTGCTTCCCCCAGCATTG
AGGTTGAGACTTCTGACCTTCCCTCCTCAACTGCACTCGCGCCTTATGAT
CCGTCCTCTTCCGTTCTGAATGTTTTGATGTCTCTACTGCCCAACTTTGA
TGCGGCCAGCCTTCTCGTAGATACGTATTTTGATCGAGTGCACTGGTTCA
TGTTGATCTTCTATCAAGATGAGTTCCGTCAACGGTGGCCCAAATTATAC
GGTCGCTCTACTGAGAGGCCTCTAACATACGCCCACCGTCACCTCGGCTT
TCTTAGCACCTTCCTGATCGTAATCGCCATCGGGCTGCAGTACGCCGGGC
CTTACCGACAAGGGATTCTCTCGAGACATGGGGTCGACATCAACCTAAGG
GATCGCATCCTCTTTACTGTGAGATCGGGGCTTCTTGACATAATGTCCCT
CGGCTCTTTAGAAGCAGTCCAAACCTGCATTTTACTGGGTACATATTATT
TATATCATGGTGCTCCACGACTGGCATGGCCGGTATGCGGATGTGGGCTT
CGTATCGCCCAAGCTCTACATCTACACCGCCGACAGCACCCCGTCCAATC
GACTGATTTCCGAACCCGCAATGAGACTCGCAAAAGATGCTGGTGGGCAG
TGTATGAGATCGAAACCTTCTCTGCTGTGGCATATGGCTATCCGCACAGT
ATCCGCGATGATGATTGCGACGTAGAACCGTTAGATCCATCAGCCAAGCT
TCAGACTATGCAGTCTCCGGGTTCATTTAATGAACCCTTGACGTCCGATC
CAACGCTACTTTCCTACAAGTACTTTATAACTAAACTGTCCACCATCACT
AAAGGAGCCTTGGATGATCTGTATCGCGTTCGCTCACATCCAGCTAGCCG
ATCTCATACAAATTCACCGGATATCCAAAGAATCGTTCGAAAGGTCGCCG
ACTACGATAACCGACTCCGCCAGTGGGAAGCAGAGATCCCTTCCCCACTT
CAGTGGCGCTGTGTTTCTCACCATTCTCATTATGCCTCCGCTGAAGAAGT
CGATCGCGCTATTGGAGCCTCGGGGCCTCGCTTCGAGAATCACATTTATC
AACTCCAAGCTCTCGCTCTGTGGCTTGCCTATCAGAACGCACGCATCCTC
ACACATCGTCCTCTTCTTTCCTACACGCTTGCCACTAGAGAGCGAACCAG
CAAGTACAATGGCGAGGCTGCGTATTCGGTCGACCCATTCAGGGCCTCCT
TAAACGCCTGTCGTGATGCAGCGCTCAGCATGTCGGAGATCCTGTCTAGT
CCGCTACTGGAAATTGTTCCGGAAACCTATGCCGCTTCATTCGTTAGCAT
TCACACATTTACAGCAGGTGTAACCCTTGGCATTCTCAGCAGCATGGATC
CTCTGGGCCCACAGTCTGCTGAGACGAAGTCCGGGCTCCGCAAACTGATC
GGCATTCAGGACAAGCTCCGAACACATTCAGTCGCAGCACAGCAGGGATT
ATCCATTCTTCAGCGGCTGGCGAAATTAGTCTTGGAAAAAGAACTTAGTG
TGATGATGGAATTGTCTACCTCTACAACCACTGCGCGATCAGACGAGGCG
ACAATTACGGATTCTCCATCAACTCAGAGAACATCGGGTCAGGTCTCCGA
TAGATCAATAGCTAGAAATGATATTATTGATCCTATCGAGGTGTCCACGG
CAATCCCAGCCCTCGATATCCCAGCTGAAGATGGCTCTGCCCAATACATG
CACGATCCTGCTCTAACGGCTGCCCTTCAAGATTTCGATCAAGGTATTGC
TCCCTAAATGCATGTTCCCCCCCCGTCCTCGATCCTGACCAGCATCCCCC
CGAGGCTTCAAGTCCAGGATCACCTTCACACCGAAGAGATCGCATTCAGC
CTTCACAATGTGGCCGCACCGGGGCCTCCTGCAACCAACGCACTCCCGGG
AGCCCCTTTGCGTGAACCAGGATCTGCTTCCCCCAGCATTGAGGTTGAGA
CTTCTGACCTTCCCTCCTCAACTGCACTCGCGCCTTATGATCCGTCCTCT
TCCGTTCTGAATGTTTTGATGTCTCTACTGCCCAACTTTGATGCGGCCAG
CCTTCTCGTAGATACGTATTTTGATCGAGTGCACTGGTTCATGTTGATCT
TCTATCAAGATGAGTTCCGTCAACGGTGGCCCAAATTATACGGTCGCTCT
ACTGAGAGGCCTCTAACATACGCCCACCGTCACCTCGGCTTTCTTAGCAC
CTTCCTGATCGTAATCGCCATCGGGCTGCAGTACGCCGGGCCTTACCGAC
AAGGGATTCTCTCGAGACATGGGGTCGACATCAACCTAAGGGATCGCATC
CTCTTTACTGTGAGATCGGGGCTTCTTGACATAATGTCCCTCGGCTCTTT
AGAAGCAGTCCAAACCTGCATTTTACTGGGTACATATTATTTATATCATG
GTGCTCCACGACTGGCATGGCCGGTATGCGGATGTGGGCTTCGTATCGCC
CAAGCTCTACATCTACACCGCCGACAGCACCCCGTCCAATCGACTGATTT
CCGAACCCGCAATGAGACTCGCAAAAGATGCTGGTGGGCAGTGTATGAGA
TCGAAACCTTCTCTGCTGTGGCATATGGCTATCCGCACAGTATCCGCGAT
GATGATTGCGACGTAGAACCGTTAGATCCATCAGCCAAGCTTCAGACTAT
GCAGTCTCCGGGTTCATTTAATGAACCCTTGACGTCCGATCCAACGCTAC
TTTCCTACAAGTACTTTATAACTAAACTGTCCACCATCACTAAAGGAGCC
TTGGATGATCTGTATCGCGTTCGCTCACATCCAGCTAGCCGATCTCATAC
AAATTCACCGGATATCCAAAGAATCGTTCGAAAGGTCGCCGACTACGATA
ACCGACTCCGCCAGTGGGAAGCAGAGATCCCTTCCCCACTTCAGTGGCGC
TGTGTTTCTCACCATTCTCATTATGCCTCCGCTGAAGAAGTCGATCGCGC
TATTGGAGCCTCGGGGCCTCGCTTCGAGAATCACATTTATCAACTCCAAG
CTCTCGCTCTGTGGCTTGCCTATCAGAACGCACGCATCCTCACACATCGT
CCTCTTCTTTCCTACACGCTTGCCACTAGAGAGCGAACCAGCAAGTACAA
TGGCGAGGCTGCGTATTCGGTCGACCCATTCAGGGCCTCCTTAAACGCCT
GTCGTGATGCAGCGCTCAGCATGTCGGAGATCCTGTCTAGTCCGCTACTG
GAAATTGTTCCGGAAACCTATGCCGCTTCATTCGTTAGCATTCACACATT
TACAGCAGGTGTAACCCTTGGCATTCTCAGCAGCATGGATCCTCTGGGCC
CACAGTCTGCTGAGACGAAGTCCGGGCTCCGCAAACTGATCGGCATTCAG
GACAAGCTCCGAACACATTCAGTCGCAGCACAGCAGGGATTATCCATTCT
TCAGCGGCTGGCGAAATTAGTCTTGGAAAAAGAACTTAGTGTGATGATGG
AATTGTCTACCTCTACAACCACTGCGCGATCAGACGAGGCGACAATTACG
GATTCTCCATCAACTCAGAGAACATCGGGTCAGGTCTCCGATAGATCAAT
AGCTAGAAATGATATTATTGATCCTATCGAGGTGTCCACGGCAATCCCAG
CCCTCGATATCCCAGCTGAAGATGGCTCTGCCCAATACATGCACGATCCT
GCTCTAACGGCTGCCCTTCAAGATTTCGATCAAGGTATTGCTCCCTAAAT
GCATGTTCCCCCCCCGTCCTCGATCCTGACCAGCATCCCCCCGAGGCTTC
AAGTCCAGGATCACCTTCACACCGAAGAGATC

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006351	transcription, DNA-templated

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
ATCC64974_59240	ATCC64974_59240	Aspergillus niger N402	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_59240-T1	ATCC64974_59240-T1-protein	Aspergillus niger N402	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_59240-T1.cds	ATCC64974_59240-T1.cds	Aspergillus niger N402	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_59240-T1.exon2	ATCC64974_59240-T1.exon2	Aspergillus niger N402	exon
ATCC64974_59240-T1.exon1	ATCC64974_59240-T1.exon1	Aspergillus niger N402	exon

Properties


Property Name	Value
Note	antiSMASH:Cluster_10000081.1
Note	EggNog:ENOG41
DBxref	InterPro:IPR007219
DBxref	PFAM:PF04082
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger N402 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
OGUI01000008.1	supercontig	OGUI01000008.1:126564..128600 -

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ATCC64974_59240-T1, ATCC64974_59240-T1 (mRNA) Aspergillus niger N402

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ATCC64974_59240-T1, ATCC64974_59240-T1 (mRNA) Aspergillus niger N402