You are here

Home

ATCC64974_59880-T1, ATCC64974_59880-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_59880-T1
Unique NameATCC64974_59880-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:308046..308956+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_59880-T1 ID=ATCC64974_59880-T1|Name=ATCC64974_59880-T1|organism=Aspergillus niger N402|type=mRNA|length=911bp|location=Sequence derived from alignment at OGUI01000008.1:308046..308956+ (Aspergillus niger N402)
ATGAGAAGGCCATCGCGCTTTCAACTATGTATTTGTTTATTATTCCTCAT
CCCATTGACGCTGCTGGCCAGCCACCTCGAAGATCTGTGCGATCAGTATC
GCGCGCAAGAGTACATATTTGATTGGTTCATACTCGATCGGGCTGATCTA
GAGAGGATACCTTCTCCTCCAGTCCGGACGGGCGACAAGGTAATTGTGGC
TGCGAAGCTGCAGAATGAACAGACAAACTGGATTGAGCAAGAACTACCTG
AGTAGGTAGTATGAAACTCACCATCACTATAGACTGTACACTAACCATAC
GAAGCTGGCAACGAGCTATCTACATCGTCAACCCATCGCGAGAAGTTGCA
GCGGATGGGCGACAACTCACAACACCCCTTAACAAGGGCCATGAATCTAT
GGCTTACCTAACATACATTATAGAGCACTATGATAGGCTCCCTTCTACCA
TGGCCTTTGTCCATTCGCATCGCTCAGGCTTTCTCCGAGCATGGCATGTT
GATGCGCCTTTGCATGATAATGCGTGGTCTATAAGAGCCTTACAACTGGA
CTTTGTGCAGCAGAATGGCTATGTCAATCTACGGTGTAACCTAAACCCAG
GCTGCAAGGCCATCTACCACCATGTAACCCGTGATATCTTCACAGAGGTA
TTCGAAGGCACCAGCACACCGCCGCGCAATCGGACTGATATCGCGCTTGG
AAGTGAAAAGCGCGCCATTGAAATCCCCGACACGGTTGCGGCAGCATGTT
GTGCGCAGTTTGCAGTATCTCGGGAGCAGGTGCTTCAGAGACCACGTGAG
GATTATATTAAGATCCGGCAGTGGGTGATTGATACGCCGTTGGATGATGC
CCACAGCGGAAGGGTTATGGAGTATCTGTGGCATATCATCTTTGGCAAAG
AATCTGTCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000008.1:308046..308956+

>ATCC64974_59880-T1 ID=ATCC64974_59880-T1|Name=ATCC64974_59880-T1|organism=Aspergillus niger N402|type=CDS|length=1716bp|location=Sequence derived from alignment at OGUI01000008.1:308046..308956+ (Aspergillus niger N402)
ATGAGAAGGCCATCGCGCTTTCAACTATGTATTTGTTTATTATTCCTCAT
CCCATTGACGCTGCTGGCCAGCCACCTCGAAGATCTGTGCGATCAGTATC
GCGCGCAAGAGTACATATTTGATTGGTTCATACTCGATCGGGCTGATCTA
GAGAGGATACCTTCTCCTCCAGTCCGGACGGGCGACAAGGTAATTGTGGC
TGCGAAGCTGCAGAATGAACAGACAAACTGGATTGAGCAAGAACTACCTG
ACTGGCAACGAGCTATCTACATCGTCAACCCATCGCGAGAAGTTGCAGCG
GATGGGCGACAACTCACAACACCCCTTAACAAGGGCCATGAATCTATGGC
TTACCTAACATACATTATAGAGCACTATGATAGGCTCCCTTCTACCATGG
CCTTTGTCCATTCGCATCGCTCAGGCTTTCTCCGAGCATGGCATGTTGAT
GCGCCTTTGCATGATAATGCGTGGTCTATAAGAGCCTTACAACTGGACTT
TGTGCAGCAGAATGGCTATGTCAATCTACGGTGTAACCTAAACCCAGGCT
GCAAGGCCATCTACCACCATGTAACCCGTGATATCTTCACAGAGGTATTC
GAAGGCACCAGCACACCGCCGCGCAATCGGACTGATATCGCGCTTGGAAG
TGAAAAGCGCGCCATTGAAATCCCCGACACGGTTGCGGCAGCATGTTGTG
CGCAGTTTGCAGTATCTCGGGAGCAGGTGCTTCAGAGACCACGTGAGGAT
TATATTAAGATCCGGCAGTGGGTGATTGATACGCCGTTGGATGATGCCCA
CAGCGGAAGGGTTATGGAGTATCTGTGGCATATCATCTTTGGCAAAGAAT
CTGTCTAGATGAGAAGGCCATCGCGCTTTCAACTATGTATTTGTTTATTA
TTCCTCATCCCATTGACGCTGCTGGCCAGCCACCTCGAAGATCTGTGCGA
TCAGTATCGCGCGCAAGAGTACATATTTGATTGGTTCATACTCGATCGGG
CTGATCTAGAGAGGATACCTTCTCCTCCAGTCCGGACGGGCGACAAGGTA
ATTGTGGCTGCGAAGCTGCAGAATGAACAGACAAACTGGATTGAGCAAGA
ACTACCTGACTGGCAACGAGCTATCTACATCGTCAACCCATCGCGAGAAG
TTGCAGCGGATGGGCGACAACTCACAACACCCCTTAACAAGGGCCATGAA
TCTATGGCTTACCTAACATACATTATAGAGCACTATGATAGGCTCCCTTC
TACCATGGCCTTTGTCCATTCGCATCGCTCAGGCTTTCTCCGAGCATGGC
ATGTTGATGCGCCTTTGCATGATAATGCGTGGTCTATAAGAGCCTTACAA
CTGGACTTTGTGCAGCAGAATGGCTATGTCAATCTACGGTGTAACCTAAA
CCCAGGCTGCAAGGCCATCTACCACCATGTAACCCGTGATATCTTCACAG
AGGTATTCGAAGGCACCAGCACACCGCCGCGCAATCGGACTGATATCGCG
CTTGGAAGTGAAAAGCGCGCCATTGAAATCCCCGACACGGTTGCGGCAGC
ATGTTGTGCGCAGTTTGCAGTATCTCGGGAGCAGGTGCTTCAGAGACCAC
GTGAGGATTATATTAAGATCCGGCAGTGGGTGATTGATACGCCGTTGGAT
GATGCCCACAGCGGAAGGGTTATGGAGTATCTGTGGCATATCATCTTTGG
CAAAGAATCTGTCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_59880ATCC64974_59880Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_59880-T1.exon1ATCC64974_59880-T1.exon1Aspergillus niger N402exon
ATCC64974_59880-T1.exon2ATCC64974_59880-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_59880-T1.cdsATCC64974_59880-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_59880-T1ATCC64974_59880-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-23)
DBxrefInterPro:IPR021838
DBxrefPFAM:PF11913
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:308046..308956 +
Powered by Drupal