You are here

Home

ATCC64974_59980-T1, ATCC64974_59980-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_59980-T1
Unique NameATCC64974_59980-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:339883..341746-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_59980-T1 ID=ATCC64974_59980-T1|Name=ATCC64974_59980-T1|organism=Aspergillus niger N402|type=mRNA|length=1864bp|location=Sequence derived from alignment at OGUI01000008.1:339883..341746- (Aspergillus niger N402)
ATGCCTCTTGAGTCCAATGAACCCCTCGACCGCGAGGATGCCCCGTTCCT
TGCCTCGGGTCAAAGGCCCTCGTCCCCTGTGGATGAAGGGGAGCCCAGTC
CGTCGGATGCACAGAAAGAACACCTTCGGAAAACTCGCTTTCGCTTAATG
TTGACCCTCTTTGCCATGATTCTGGCCGTCGAAGTTGGCATCTGCATGTC
CAACGGCCCCGTCACCCGTATATACGAGTCCATCGCCTGTCGAGAGTACT
ACGCGCAACATGATCCCACCCAGATTGGGGCTGACGGCGAGGTCCAGGAG
GAATTGTGCAAGGTTAAGGCGGTCCAGCAGGATCTGGCTGCAGTGAAGGG
CTATATGGAGTTTTTCGATGGCATTCTCAGTAGGTCACGACGAAGGCACC
ACTGTTTCGGACGAGGCTACGTCGCATCTCTTGTTCCCTAGTCTCTACCG
ATCGGGCGCCTCCCTTTTTGCACTTCATGCGCGACATATAGACGAGGACC
CTTATTCACGTTCCTTCTCATCCAGGTGCTGTGCTAGCAATTCCATACGG
TCTGTTGGCTGATCGACGGGGACGGAAATCCACCATTTGTCTCAGCATTC
CCGGATTCGCCCTGAACTGCATCATTCAGCTGGTGGTGATGTGGCGCCCA
GACGTCTTCCCCCTGCGAACTGTCTGGGCATCCTCCTTGGCTTGGTTGTT
TGGCGGAGGCCCTGTCGTGGCTTTCGCCATTATCTGGACCATGATGTCGG
ATGTGTCAACCGAAGAGGAAAGGTATGCGTGTTCTAGATGCCACAATCGT
TGGTGGGATTATAGCTAATGATTCTCAGAGCGGCGATATTCTTCAGGTTC
GGCGTGGCTAGCATGGGGGCCGATTTCGCCTCCAGTGCCGCCAGCTCCTG
GTTGATGTCACTAGACCCGTGGCTTCCTCTCTTACTAGGTTGGGGCTTGG
CTGTTATTGGCATGTTCTTCGCCTTATCGCTACCGGAAACAATGCGTGTA
GGATCATCGCAGCCGACTTGGAAGCAACCGAGCATGGAGATGAGTCAGGT
ATCACCGGGAAACGCCGAGTATAAGGAAGTTCCCAGCAAGGAACAAGAAC
AGGAGGTGCTTAGCGATGAAGAGACTCTTCAAGGAGAGGAAGCTTCTTTC
ACGACCAAGACAGCACGACCAACCTTCTTCGCTTCTGCGAATCAACGGTC
GCGGGCCTATTTCGCGCCCTACTCCTTCATTTTCAGGAACAAACAGATCA
TGCTCCTCCTTACCGCGTTTCTTGTCTATCGACTGAGCCGTGGCTCGTCC
TGGTTTTTGGTCCAGTACATCTCCACGCGGTATAAGTGGACCCTGGCAGA
AGCGAACTTCCTCATGTCATTCAAGCCGGCCTTGACCATCCCGTTGTTCT
TGTTCATCCTACCGGCTATTTCACGACAGCTGCTCAAAACCATGAAGCCG
ACGCAGAAAGACCTGCAGCTCATGCGCATCAGTATCGGGCTGTTGGCGGT
AGGAACGTTGGGAATCGGTCTTTCTCCTAGCGTAGCCATGTTGATTCCCA
GTCTGCTCGTCCAGACATCCGGGTCTGGATTTGTCTTCCTGACTCGTGCG
CTCATTACCACCTTGGTGAATCGAGAAGAAACGGCACGTCTCTTCACCAT
CATCGAGGTTCTGCAGTCGGTGGGCAATGTCATTGCCAGTTTGTCCATTA
CCACGGTGTTCCAAATCGGGCTGGAACTCGGAGGGCCTTGGATTGGTCTG
GCCTGGATGATGACGGCGACGGCCTTCACTCTGGTAGGTGTAGCTATCTG
GATGTTTCGGATTCCTTCTCGTCAGTCGGATGACAAGATGGAGGAAGACA
ACGAGGTGTTTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000008.1:339883..341746-

>ATCC64974_59980-T1 ID=ATCC64974_59980-T1|Name=ATCC64974_59980-T1|organism=Aspergillus niger N402|type=CDS|length=4986bp|location=Sequence derived from alignment at OGUI01000008.1:339883..341746- (Aspergillus niger N402)
AGCGGCGATATTCTTCAGGTTCGGCGTGGCTAGCATGGGGGCCGATTTCG
CCTCCAGTGCCGCCAGCTCCTGGTTGATGTCACTAGACCCGTGGCTTCCT
CTCTTACTAGGTTGGGGCTTGGCTGTTATTGGCATGTTCTTCGCCTTATC
GCTACCGGAAACAATGCGTGTAGGATCATCGCAGCCGACTTGGAAGCAAC
CGAGCATGGAGATGAGTCAGGTATCACCGGGAAACGCCGAGTATAAGGAA
GTTCCCAGCAAGGAACAAGAACAGGAGGTGCTTAGCGATGAAGAGACTCT
TCAAGGAGAGGAAGCTTCTTTCACGACCAAGACAGCACGACCAACCTTCT
TCGCTTCTGCGAATCAACGGTCGCGGGCCTATTTCGCGCCCTACTCCTTC
ATTTTCAGGAACAAACAGATCATGCTCCTCCTTACCGCGTTTCTTGTCTA
TCGACTGAGCCGTGGCTCGTCCTGGTTTTTGGTCCAGTACATCTCCACGC
GGTATAAGTGGACCCTGGCAGAAGCGAACTTCCTCATGTCATTCAAGCCG
GCCTTGACCATCCCGTTGTTCTTGTTCATCCTACCGGCTATTTCACGACA
GCTGCTCAAAACCATGAAGCCGACGCAGAAAGACCTGCAGCTCATGCGCA
TCAGTATCGGGCTGTTGGCGGTAGGAACGTTGGGAATCGGTCTTTCTCCT
AGCGTAGCCATGTTGATTCCCAGTCTGCTCGTCCAGACATCCGGGTCTGG
ATTTGTCTTCCTGACTCGTGCGCTCATTACCACCTTGGTGAATCGAGAAG
AAACGGCACGTCTCTTCACCATCATCGAGGTTCTGCAGTCGGTGGGCAAT
GTCATTGCCAGTTTGTCCATTACCACGGTGTTCCAAATCGGGCTGGAACT
CGGAGGGCCTTGGATTGGTCTGGCCTGGATGATGACGGCGACGGCCTTCA
CTCTGGTAGGTGTAGCTATCTGGATGTTTCGGATTCCTTCTCGTCAGTCG
GATGACAAGATGGAGGAAGACAACGAGGTGTTTTGAGTGCTGTGCTAGCA
ATTCCATACGGTCTGTTGGCTGATCGACGGGGACGGAAATCCACCATTTG
TCTCAGCATTCCCGGATTCGCCCTGAACTGCATCATTCAGCTGGTGGTGA
TGTGGCGCCCAGACGTCTTCCCCCTGCGAACTGTCTGGGCATCCTCCTTG
GCTTGGTTGTTTGGCGGAGGCCCTGTCGTGGCTTTCGCCATTATCTGGAC
CATGATGTCGGATGTGTCAACCGAAGAGGAAAGATGCCTCTTGAGTCCAA
TGAACCCCTCGACCGCGAGGATGCCCCGTTCCTTGCCTCGGGTCAAAGGC
CCTCGTCCCCTGTGGATGAAGGGGAGCCCAGTCCGTCGGATGCACAGAAA
GAACACCTTCGGAAAACTCGCTTTCGCTTAATGTTGACCCTCTTTGCCAT
GATTCTGGCCGTCGAAGTTGGCATCTGCATGTCCAACGGCCCCGTCACCC
GTATATACGAGTCCATCGCCTGTCGAGAGTACTACGCGCAACATGATCCC
ACCCAGATTGGGGCTGACGGCGAGGTCCAGGAGGAATTGTGCAAGGTTAA
GGCGGTCCAGCAGGATCTGGCTGCAGTGAAGGGCTATATGGAGTTTTTCG
ATGGCATTCTCAAGCGGCGATATTCTTCAGGTTCGGCGTGGCTAGCATGG
GGGCCGATTTCGCCTCCAGTGCCGCCAGCTCCTGGTTGATGTCACTAGAC
CCGTGGCTTCCTCTCTTACTAGGTTGGGGCTTGGCTGTTATTGGCATGTT
CTTCGCCTTATCGCTACCGGAAACAATGCGTGTAGGATCATCGCAGCCGA
CTTGGAAGCAACCGAGCATGGAGATGAGTCAGGTATCACCGGGAAACGCC
GAGTATAAGGAAGTTCCCAGCAAGGAACAAGAACAGGAGGTGCTTAGCGA
TGAAGAGACTCTTCAAGGAGAGGAAGCTTCTTTCACGACCAAGACAGCAC
GACCAACCTTCTTCGCTTCTGCGAATCAACGGTCGCGGGCCTATTTCGCG
CCCTACTCCTTCATTTTCAGGAACAAACAGATCATGCTCCTCCTTACCGC
GTTTCTTGTCTATCGACTGAGCCGTGGCTCGTCCTGGTTTTTGGTCCAGT
ACATCTCCACGCGGTATAAGTGGACCCTGGCAGAAGCGAACTTCCTCATG
TCATTCAAGCCGGCCTTGACCATCCCGTTGTTCTTGTTCATCCTACCGGC
TATTTCACGACAGCTGCTCAAAACCATGAAGCCGACGCAGAAAGACCTGC
AGCTCATGCGCATCAGTATCGGGCTGTTGGCGGTAGGAACGTTGGGAATC
GGTCTTTCTCCTAGCGTAGCCATGTTGATTCCCAGTCTGCTCGTCCAGAC
ATCCGGGTCTGGATTTGTCTTCCTGACTCGTGCGCTCATTACCACCTTGG
TGAATCGAGAAGAAACGGCACGTCTCTTCACCATCATCGAGGTTCTGCAG
TCGGTGGGCAATGTCATTGCCAGTTTGTCCATTACCACGGTGTTCCAAAT
CGGGCTGGAACTCGGAGGGCCTTGGATTGGTCTGGCCTGGATGATGACGG
CGACGGCCTTCACTCTGGTAGGTGTAGCTATCTGGATGTTTCGGATTCCT
TCTCGTCAGTCGGATGACAAGATGGAGGAAGACAACGAGGTGTTTTGAGT
GCTGTGCTAGCAATTCCATACGGTCTGTTGGCTGATCGACGGGGACGGAA
ATCCACCATTTGTCTCAGCATTCCCGGATTCGCCCTGAACTGCATCATTC
AGCTGGTGGTGATGTGGCGCCCAGACGTCTTCCCCCTGCGAACTGTCTGG
GCATCCTCCTTGGCTTGGTTGTTTGGCGGAGGCCCTGTCGTGGCTTTCGC
CATTATCTGGACCATGATGTCGGATGTGTCAACCGAAGAGGAAAGATGCC
TCTTGAGTCCAATGAACCCCTCGACCGCGAGGATGCCCCGTTCCTTGCCT
CGGGTCAAAGGCCCTCGTCCCCTGTGGATGAAGGGGAGCCCAGTCCGTCG
GATGCACAGAAAGAACACCTTCGGAAAACTCGCTTTCGCTTAATGTTGAC
CCTCTTTGCCATGATTCTGGCCGTCGAAGTTGGCATCTGCATGTCCAACG
GCCCCGTCACCCGTATATACGAGTCCATCGCCTGTCGAGAGTACTACGCG
CAACATGATCCCACCCAGATTGGGGCTGACGGCGAGGTCCAGGAGGAATT
GTGCAAGGTTAAGGCGGTCCAGCAGGATCTGGCTGCAGTGAAGGGCTATA
TGGAGTTTTTCGATGGCATTCTCAAGCGGCGATATTCTTCAGGTTCGGCG
TGGCTAGCATGGGGGCCGATTTCGCCTCCAGTGCCGCCAGCTCCTGGTTG
ATGTCACTAGACCCGTGGCTTCCTCTCTTACTAGGTTGGGGCTTGGCTGT
TATTGGCATGTTCTTCGCCTTATCGCTACCGGAAACAATGCGTGTAGGAT
CATCGCAGCCGACTTGGAAGCAACCGAGCATGGAGATGAGTCAGGTATCA
CCGGGAAACGCCGAGTATAAGGAAGTTCCCAGCAAGGAACAAGAACAGGA
GGTGCTTAGCGATGAAGAGACTCTTCAAGGAGAGGAAGCTTCTTTCACGA
CCAAGACAGCACGACCAACCTTCTTCGCTTCTGCGAATCAACGGTCGCGG
GCCTATTTCGCGCCCTACTCCTTCATTTTCAGGAACAAACAGATCATGCT
CCTCCTTACCGCGTTTCTTGTCTATCGACTGAGCCGTGGCTCGTCCTGGT
TTTTGGTCCAGTACATCTCCACGCGGTATAAGTGGACCCTGGCAGAAGCG
AACTTCCTCATGTCATTCAAGCCGGCCTTGACCATCCCGTTGTTCTTGTT
CATCCTACCGGCTATTTCACGACAGCTGCTCAAAACCATGAAGCCGACGC
AGAAAGACCTGCAGCTCATGCGCATCAGTATCGGGCTGTTGGCGGTAGGA
ACGTTGGGAATCGGTCTTTCTCCTAGCGTAGCCATGTTGATTCCCAGTCT
GCTCGTCCAGACATCCGGGTCTGGATTTGTCTTCCTGACTCGTGCGCTCA
TTACCACCTTGGTGAATCGAGAAGAAACGGCACGTCTCTTCACCATCATC
GAGGTTCTGCAGTCGGTGGGCAATGTCATTGCCAGTTTGTCCATTACCAC
GGTGTTCCAAATCGGGCTGGAACTCGGAGGGCCTTGGATTGGTCTGGCCT
GGATGATGACGGCGACGGCCTTCACTCTGGTAGGTGTAGCTATCTGGATG
TTTCGGATTCCTTCTCGTCAGTCGGATGACAAGATGGAGGAAGACAACGA
GGTGTTTTGAGTGCTGTGCTAGCAATTCCATACGGTCTGTTGGCTGATCG
ACGGGGACGGAAATCCACCATTTGTCTCAGCATTCCCGGATTCGCCCTGA
ACTGCATCATTCAGCTGGTGGTGATGTGGCGCCCAGACGTCTTCCCCCTG
CGAACTGTCTGGGCATCCTCCTTGGCTTGGTTGTTTGGCGGAGGCCCTGT
CGTGGCTTTCGCCATTATCTGGACCATGATGTCGGATGTGTCAACCGAAG
AGGAAAGATGCCTCTTGAGTCCAATGAACCCCTCGACCGCGAGGATGCCC
CGTTCCTTGCCTCGGGTCAAAGGCCCTCGTCCCCTGTGGATGAAGGGGAG
CCCAGTCCGTCGGATGCACAGAAAGAACACCTTCGGAAAACTCGCTTTCG
CTTAATGTTGACCCTCTTTGCCATGATTCTGGCCGTCGAAGTTGGCATCT
GCATGTCCAACGGCCCCGTCACCCGTATATACGAGTCCATCGCCTGTCGA
GAGTACTACGCGCAACATGATCCCACCCAGATTGGGGCTGACGGCGAGGT
CCAGGAGGAATTGTGCAAGGTTAAGGCGGTCCAGCAGGATCTGGCTGCAG
TGAAGGGCTATATGGAGTTTTTCGATGGCATTCTCA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_59980ATCC64974_59980Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_59980-T1ATCC64974_59980-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_59980-T1.cdsATCC64974_59980-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_59980-T1.exon3ATCC64974_59980-T1.exon3Aspergillus niger N402exon
ATCC64974_59980-T1.exon2ATCC64974_59980-T1.exon2Aspergillus niger N402exon
ATCC64974_59980-T1.exon1ATCC64974_59980-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:339883..341746 -
Powered by Drupal