You are here

Home

ATCC64974_61060-T1, ATCC64974_61060-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_61060-T1
Unique NameATCC64974_61060-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:700003..702282-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_61060-T1 ID=ATCC64974_61060-T1|Name=ATCC64974_61060-T1|organism=Aspergillus niger N402|type=mRNA|length=2280bp|location=Sequence derived from alignment at OGUI01000008.1:700003..702282- (Aspergillus niger N402)
ATGGCACCTCCATACTCCAGTTCCCAGGCCGCCTTGACCGGCTATACTCC
CTCATTCCTGTCGCTACAGGACCAGAACGCTCCTCTCTCCGCCTACTCCA
TCCTAGGATCCGGTCAATATCCCGATAGTGTCGCATACTGGCACAATCCA
TCCGCGCAACCCCAGCCGCCGCTACCTCCCGCCGCCGTCGCCGCCTCCTA
TCCGTCCGTGCCCCCGAAGGCCCAGTCGCTCCTCCAGCCCACCTCCGATC
AGAAGAAGCATAAGCGTACTCGCAGTGGCTGTTTCACCTGTCGATCCCGT
CGCATCAAGTGCGACGAAGCACGTCCCGTCTGCGACAGATGTCGGAAGGG
CAACCGCGACTGCGTCTATCCGTCAGCCACAGGTGCATCCAAGTCAGGAA
CCCGTAGCGTGTCCAAGCCCAGAGGATCACTGTTGCGTGGAAATGAGTCT
TCCGCTCACCCGGGATCCGAGGACTTCCGCGTCTTGGAGCCCATCGCCGA
CGAGGATGAGGATGGAACTAGTGTCGGGTCAAGTACCCGACTGTCCCCAA
CAGCCGCACCCACATGGTCTAAACCCAACCTCCCCAGACGACAAAGTGGT
CAGTCTTTGAAGCAGCAGGGTGGGAGGCATGTTGTTGCGACCGACTTGGG
TGGTGCACGGATTGAGAATAGTAACTCGCCGTCCCCGTCCTCGGATACGT
CATCTAGATACGACTCGCTAAGCGCTCGGTCGGCCAGTGTCGGTGTCACC
CTGCCCGAACCATATGGATCCACTCTGCCCAGTATAGCACATCTGCCGGA
CGACCTGCGATTTTATCTCAACTACCACCAAGAATTCATCACGTACCGTC
ATTATTTCTTAAAACCGGTCAATGACCGGTTTGTCCATCAAAGTATCATT
GAGCTGGCGTTGCAGTATGATCCCCTGCTGTATGCCGTGGTGGGCTTTTC
TGCATATCATCATTGTGTTCAAAACAACAGTGGGAAACTATACACCTTTT
TGAAATATTACAACTTCGCGTTGAAGCTCCTGCGCAAGTCCTTGGGCTCG
GGTGAGCCGCATAATGAGGCGACTCTGATCACGGTGCTTGTCCTCACCAC
ATTCGAGGTAAGACATTCAGCCAGTTTTTATGCTTCTTGCAAATGAACCC
TACTGACTCGCCAGGAATCCGTCGGGGACTGGGTCAACCTCATTGGCCAC
CATCAGGCTGCTCACGCCTTGGTGCGGGAGATCCTAACGCCGGAGTCTGC
CAACCTGAACGAGCTACATGGCAACATCTTCGTTTGGTACGCCCGATTCG
ACGTGGTAGCAGGGATTTTGGCCGGAAATGAGACGATCCTAAGTCGTGAT
TGGTATGTTGCAAAAGAGGAGTATGATGCTCAGGAAGCCGCCCGCCATCC
AAACGATGCAACGAAGCAACTGGCGCTGGCGAATTCGATCAACCGCCGGT
TTGGCCTGGAAATGGCGTCATTATATGCGAAGTTGTCGCGCGGTTTGATT
CCAGTTAATGAGTTCATTATCCAGAACGAGTTGTTGGGGCAGACCTTGGA
AAGGGTACGAACCATCCTAGAATCGTTCAACGACTCTGATTACACCGTGC
GGGAGTATCCTAATCAGGTTCCCTTGACCCCGGACGACGTCGTGGATCCG
TATGTTCCCGGGGGAATGCACCACGGGCCCCTGTGGGAAGTCAACATGAC
GTGGGTTGACTATTACTCCACCAAGGCCATGTACAAGTATCAGTCACTTC
TTTCGGTCAGGCAATCATCGGTGGAAGAGTTACAATCCCTCTCGGTGGAG
CTGGTCCGGCTAATGGAGGCGGTTGATCGATGGCCCATGAAGGAAAGCGG
ATGCATCCTGGCGTTCAAGAACAGCATCGGAATGGCCGCCATGTTCTGTC
CTCGCGATGAACGGTACATTATGTGGGCGCGGAGGAAGTTCGCTCAGCTG
GAGCAAAGCGGGTGAGTGTTGCAAGTCAGGGAGATGTTGGAAGTCAGCTA
ATTGTAGTCGATCAGATACGTTATTGCGGCCACTTTCCGGGCGGCACTGG
CAGCCTCGTGGCAGAAGCCCGAAGTCAATCGCTGGTGGTTGCCAGACGAC
GAAGGATACCCGAGCATCATCCGTGAGGTGCGAGCGATGACGGAAGAACG
CACGAGCCACCCTCGAGATAACTTCGGCGAGGATGTCAGCCATATGAAGA
CGCTATTTTGGAACATCAGCTTGGACGACACCTCCAGCGAGGGGAGTCCC
GCGTCGGTGAACACAGAAGGCCGACCATGA
back to top

Coding sequence (CDS) from alignment at OGUI01000008.1:700003..702282-

>ATCC64974_61060-T1 ID=ATCC64974_61060-T1|Name=ATCC64974_61060-T1|organism=Aspergillus niger N402|type=CDS|length=6507bp|location=Sequence derived from alignment at OGUI01000008.1:700003..702282- (Aspergillus niger N402)
ATACGTTATTGCGGCCACTTTCCGGGCGGCACTGGCAGCCTCGTGGCAGA
AGCCCGAAGTCAATCGCTGGTGGTTGCCAGACGACGAAGGATACCCGAGC
ATCATCCGTGAGGTGCGAGCGATGACGGAAGAACGCACGAGCCACCCTCG
AGATAACTTCGGCGAGGATGTCAGCCATATGAAGACGCTATTTTGGAACA
TCAGCTTGGACGACACCTCCAGCGAGGGGAGTCCCGCGTCGGTGAACACA
GAAGGCCGACCATGAGAATCCGTCGGGGACTGGGTCAACCTCATTGGCCA
CCATCAGGCTGCTCACGCCTTGGTGCGGGAGATCCTAACGCCGGAGTCTG
CCAACCTGAACGAGCTACATGGCAACATCTTCGTTTGGTACGCCCGATTC
GACGTGGTAGCAGGGATTTTGGCCGGAAATGAGACGATCCTAAGTCGTGA
TTGGTATGTTGCAAAAGAGGAGTATGATGCTCAGGAAGCCGCCCGCCATC
CAAACGATGCAACGAAGCAACTGGCGCTGGCGAATTCGATCAACCGCCGG
TTTGGCCTGGAAATGGCGTCATTATATGCGAAGTTGTCGCGCGGTTTGAT
TCCAGTTAATGAGTTCATTATCCAGAACGAGTTGTTGGGGCAGACCTTGG
AAAGGGTACGAACCATCCTAGAATCGTTCAACGACTCTGATTACACCGTG
CGGGAGTATCCTAATCAGGTTCCCTTGACCCCGGACGACGTCGTGGATCC
GTATGTTCCCGGGGGAATGCACCACGGGCCCCTGTGGGAAGTCAACATGA
CGTGGGTTGACTATTACTCCACCAAGGCCATGTACAAGTATCAGTCACTT
CTTTCGGTCAGGCAATCATCGGTGGAAGAGTTACAATCCCTCTCGGTGGA
GCTGGTCCGGCTAATGGAGGCGGTTGATCGATGGCCCATGAAGGAAAGCG
GATGCATCCTGGCGTTCAAGAACAGCATCGGAATGGCCGCCATGTTCTGT
CCTCGCGATGAACGGTACATTATGTGGGCGCGGAGGAAGTTCGCTCAGCT
GGAGCAAAGCGGATGGCACCTCCATACTCCAGTTCCCAGGCCGCCTTGAC
CGGCTATACTCCCTCATTCCTGTCGCTACAGGACCAGAACGCTCCTCTCT
CCGCCTACTCCATCCTAGGATCCGGTCAATATCCCGATAGTGTCGCATAC
TGGCACAATCCATCCGCGCAACCCCAGCCGCCGCTACCTCCCGCCGCCGT
CGCCGCCTCCTATCCGTCCGTGCCCCCGAAGGCCCAGTCGCTCCTCCAGC
CCACCTCCGATCAGAAGAAGCATAAGCGTACTCGCAGTGGCTGTTTCACC
TGTCGATCCCGTCGCATCAAGTGCGACGAAGCACGTCCCGTCTGCGACAG
ATGTCGGAAGGGCAACCGCGACTGCGTCTATCCGTCAGCCACAGGTGCAT
CCAAGTCAGGAACCCGTAGCGTGTCCAAGCCCAGAGGATCACTGTTGCGT
GGAAATGAGTCTTCCGCTCACCCGGGATCCGAGGACTTCCGCGTCTTGGA
GCCCATCGCCGACGAGGATGAGGATGGAACTAGTGTCGGGTCAAGTACCC
GACTGTCCCCAACAGCCGCACCCACATGGTCTAAACCCAACCTCCCCAGA
CGACAAAGTGGTCAGTCTTTGAAGCAGCAGGGTGGGAGGCATGTTGTTGC
GACCGACTTGGGTGGTGCACGGATTGAGAATAGTAACTCGCCGTCCCCGT
CCTCGGATACGTCATCTAGATACGACTCGCTAAGCGCTCGGTCGGCCAGT
GTCGGTGTCACCCTGCCCGAACCATATGGATCCACTCTGCCCAGTATAGC
ACATCTGCCGGACGACCTGCGATTTTATCTCAACTACCACCAAGAATTCA
TCACGTACCGTCATTATTTCTTAAAACCGGTCAATGACCGGTTTGTCCAT
CAAAGTATCATTGAGCTGGCGTTGCAGTATGATCCCCTGCTGTATGCCGT
GGTGGGCTTTTCTGCATATCATCATTGTGTTCAAAACAACAGTGGGAAAC
TATACACCTTTTTGAAATATTACAACTTCGCGTTGAAGCTCCTGCGCAAG
TCCTTGGGCTCGGGTGAGCCGCATAATGAGGCGACTCTGATCACGGTGCT
TGTCCTCACCACATTCGAGATACGTTATTGCGGCCACTTTCCGGGCGGCA
CTGGCAGCCTCGTGGCAGAAGCCCGAAGTCAATCGCTGGTGGTTGCCAGA
CGACGAAGGATACCCGAGCATCATCCGTGAGGTGCGAGCGATGACGGAAG
AACGCACGAGCCACCCTCGAGATAACTTCGGCGAGGATGTCAGCCATATG
AAGACGCTATTTTGGAACATCAGCTTGGACGACACCTCCAGCGAGGGGAG
TCCCGCGTCGGTGAACACAGAAGGCCGACCATGAGAATCCGTCGGGGACT
GGGTCAACCTCATTGGCCACCATCAGGCTGCTCACGCCTTGGTGCGGGAG
ATCCTAACGCCGGAGTCTGCCAACCTGAACGAGCTACATGGCAACATCTT
CGTTTGGTACGCCCGATTCGACGTGGTAGCAGGGATTTTGGCCGGAAATG
AGACGATCCTAAGTCGTGATTGGTATGTTGCAAAAGAGGAGTATGATGCT
CAGGAAGCCGCCCGCCATCCAAACGATGCAACGAAGCAACTGGCGCTGGC
GAATTCGATCAACCGCCGGTTTGGCCTGGAAATGGCGTCATTATATGCGA
AGTTGTCGCGCGGTTTGATTCCAGTTAATGAGTTCATTATCCAGAACGAG
TTGTTGGGGCAGACCTTGGAAAGGGTACGAACCATCCTAGAATCGTTCAA
CGACTCTGATTACACCGTGCGGGAGTATCCTAATCAGGTTCCCTTGACCC
CGGACGACGTCGTGGATCCGTATGTTCCCGGGGGAATGCACCACGGGCCC
CTGTGGGAAGTCAACATGACGTGGGTTGACTATTACTCCACCAAGGCCAT
GTACAAGTATCAGTCACTTCTTTCGGTCAGGCAATCATCGGTGGAAGAGT
TACAATCCCTCTCGGTGGAGCTGGTCCGGCTAATGGAGGCGGTTGATCGA
TGGCCCATGAAGGAAAGCGGATGCATCCTGGCGTTCAAGAACAGCATCGG
AATGGCCGCCATGTTCTGTCCTCGCGATGAACGGTACATTATGTGGGCGC
GGAGGAAGTTCGCTCAGCTGGAGCAAAGCGGATGGCACCTCCATACTCCA
GTTCCCAGGCCGCCTTGACCGGCTATACTCCCTCATTCCTGTCGCTACAG
GACCAGAACGCTCCTCTCTCCGCCTACTCCATCCTAGGATCCGGTCAATA
TCCCGATAGTGTCGCATACTGGCACAATCCATCCGCGCAACCCCAGCCGC
CGCTACCTCCCGCCGCCGTCGCCGCCTCCTATCCGTCCGTGCCCCCGAAG
GCCCAGTCGCTCCTCCAGCCCACCTCCGATCAGAAGAAGCATAAGCGTAC
TCGCAGTGGCTGTTTCACCTGTCGATCCCGTCGCATCAAGTGCGACGAAG
CACGTCCCGTCTGCGACAGATGTCGGAAGGGCAACCGCGACTGCGTCTAT
CCGTCAGCCACAGGTGCATCCAAGTCAGGAACCCGTAGCGTGTCCAAGCC
CAGAGGATCACTGTTGCGTGGAAATGAGTCTTCCGCTCACCCGGGATCCG
AGGACTTCCGCGTCTTGGAGCCCATCGCCGACGAGGATGAGGATGGAACT
AGTGTCGGGTCAAGTACCCGACTGTCCCCAACAGCCGCACCCACATGGTC
TAAACCCAACCTCCCCAGACGACAAAGTGGTCAGTCTTTGAAGCAGCAGG
GTGGGAGGCATGTTGTTGCGACCGACTTGGGTGGTGCACGGATTGAGAAT
AGTAACTCGCCGTCCCCGTCCTCGGATACGTCATCTAGATACGACTCGCT
AAGCGCTCGGTCGGCCAGTGTCGGTGTCACCCTGCCCGAACCATATGGAT
CCACTCTGCCCAGTATAGCACATCTGCCGGACGACCTGCGATTTTATCTC
AACTACCACCAAGAATTCATCACGTACCGTCATTATTTCTTAAAACCGGT
CAATGACCGGTTTGTCCATCAAAGTATCATTGAGCTGGCGTTGCAGTATG
ATCCCCTGCTGTATGCCGTGGTGGGCTTTTCTGCATATCATCATTGTGTT
CAAAACAACAGTGGGAAACTATACACCTTTTTGAAATATTACAACTTCGC
GTTGAAGCTCCTGCGCAAGTCCTTGGGCTCGGGTGAGCCGCATAATGAGG
CGACTCTGATCACGGTGCTTGTCCTCACCACATTCGAGATACGTTATTGC
GGCCACTTTCCGGGCGGCACTGGCAGCCTCGTGGCAGAAGCCCGAAGTCA
ATCGCTGGTGGTTGCCAGACGACGAAGGATACCCGAGCATCATCCGTGAG
GTGCGAGCGATGACGGAAGAACGCACGAGCCACCCTCGAGATAACTTCGG
CGAGGATGTCAGCCATATGAAGACGCTATTTTGGAACATCAGCTTGGACG
ACACCTCCAGCGAGGGGAGTCCCGCGTCGGTGAACACAGAAGGCCGACCA
TGAGAATCCGTCGGGGACTGGGTCAACCTCATTGGCCACCATCAGGCTGC
TCACGCCTTGGTGCGGGAGATCCTAACGCCGGAGTCTGCCAACCTGAACG
AGCTACATGGCAACATCTTCGTTTGGTACGCCCGATTCGACGTGGTAGCA
GGGATTTTGGCCGGAAATGAGACGATCCTAAGTCGTGATTGGTATGTTGC
AAAAGAGGAGTATGATGCTCAGGAAGCCGCCCGCCATCCAAACGATGCAA
CGAAGCAACTGGCGCTGGCGAATTCGATCAACCGCCGGTTTGGCCTGGAA
ATGGCGTCATTATATGCGAAGTTGTCGCGCGGTTTGATTCCAGTTAATGA
GTTCATTATCCAGAACGAGTTGTTGGGGCAGACCTTGGAAAGGGTACGAA
CCATCCTAGAATCGTTCAACGACTCTGATTACACCGTGCGGGAGTATCCT
AATCAGGTTCCCTTGACCCCGGACGACGTCGTGGATCCGTATGTTCCCGG
GGGAATGCACCACGGGCCCCTGTGGGAAGTCAACATGACGTGGGTTGACT
ATTACTCCACCAAGGCCATGTACAAGTATCAGTCACTTCTTTCGGTCAGG
CAATCATCGGTGGAAGAGTTACAATCCCTCTCGGTGGAGCTGGTCCGGCT
AATGGAGGCGGTTGATCGATGGCCCATGAAGGAAAGCGGATGCATCCTGG
CGTTCAAGAACAGCATCGGAATGGCCGCCATGTTCTGTCCTCGCGATGAA
CGGTACATTATGTGGGCGCGGAGGAAGTTCGCTCAGCTGGAGCAAAGCGG
ATGGCACCTCCATACTCCAGTTCCCAGGCCGCCTTGACCGGCTATACTCC
CTCATTCCTGTCGCTACAGGACCAGAACGCTCCTCTCTCCGCCTACTCCA
TCCTAGGATCCGGTCAATATCCCGATAGTGTCGCATACTGGCACAATCCA
TCCGCGCAACCCCAGCCGCCGCTACCTCCCGCCGCCGTCGCCGCCTCCTA
TCCGTCCGTGCCCCCGAAGGCCCAGTCGCTCCTCCAGCCCACCTCCGATC
AGAAGAAGCATAAGCGTACTCGCAGTGGCTGTTTCACCTGTCGATCCCGT
CGCATCAAGTGCGACGAAGCACGTCCCGTCTGCGACAGATGTCGGAAGGG
CAACCGCGACTGCGTCTATCCGTCAGCCACAGGTGCATCCAAGTCAGGAA
CCCGTAGCGTGTCCAAGCCCAGAGGATCACTGTTGCGTGGAAATGAGTCT
TCCGCTCACCCGGGATCCGAGGACTTCCGCGTCTTGGAGCCCATCGCCGA
CGAGGATGAGGATGGAACTAGTGTCGGGTCAAGTACCCGACTGTCCCCAA
CAGCCGCACCCACATGGTCTAAACCCAACCTCCCCAGACGACAAAGTGGT
CAGTCTTTGAAGCAGCAGGGTGGGAGGCATGTTGTTGCGACCGACTTGGG
TGGTGCACGGATTGAGAATAGTAACTCGCCGTCCCCGTCCTCGGATACGT
CATCTAGATACGACTCGCTAAGCGCTCGGTCGGCCAGTGTCGGTGTCACC
CTGCCCGAACCATATGGATCCACTCTGCCCAGTATAGCACATCTGCCGGA
CGACCTGCGATTTTATCTCAACTACCACCAAGAATTCATCACGTACCGTC
ATTATTTCTTAAAACCGGTCAATGACCGGTTTGTCCATCAAAGTATCATT
GAGCTGGCGTTGCAGTATGATCCCCTGCTGTATGCCGTGGTGGGCTTTTC
TGCATATCATCATTGTGTTCAAAACAACAGTGGGAAACTATACACCTTTT
TGAAATATTACAACTTCGCGTTGAAGCTCCTGCGCAAGTCCTTGGGCTCG
GGTGAGCCGCATAATGAGGCGACTCTGATCACGGTGCTTGTCCTCACCAC
ATTCGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_61060ATCC64974_61060Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61060-T1ATCC64974_61060-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61060-T1.cdsATCC64974_61060-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61060-T1.exon3ATCC64974_61060-T1.exon3Aspergillus niger N402exon
ATCC64974_61060-T1.exon2ATCC64974_61060-T1.exon2Aspergillus niger N402exon
ATCC64974_61060-T1.exon1ATCC64974_61060-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:700003..702282 -
Powered by Drupal