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ATCC64974_61180-T1, ATCC64974_61180-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_61180-T1
Unique NameATCC64974_61180-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:736657..737452+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_61180-T1 ID=ATCC64974_61180-T1|Name=ATCC64974_61180-T1|organism=Aspergillus niger N402|type=mRNA|length=796bp|location=Sequence derived from alignment at OGUI01000008.1:736657..737452+ (Aspergillus niger N402)
ATGGACGTTCCTGAGCCTGAGCAGACGCCTTTCACGGCCGTGACGGCGCA
AACCTCGAAGCTGGCTAGGGTACGTATCTGTACTTCCTTTTGGACCCTTT
TTCACAGTGTCTGTCGCAATCCTGCAACCAGCGCAGACGACGTGCCCATC
CGCTACCCCAGCAGACAACACCAACCCACGGACCATGACATGACATGATA
AGCTAACTAATACCTCGCACAGCAATACCAAACCTACCTCGACGCCTCCA
CCCCATTCACAGCCTACCGCTGGACCGGCACCGTCGTCCTGCTCCTCGTC
TTCTTCCTGAGAATCGTCCTCGCCCAGGGATGGTACATCGTGGCCTACAC
CCTCGGCATCTACCTGCTCAACCTCTTCCTCCTCTTCCTGCAACCCAAGT
TCGACCCCTCCCTGACGCAGGATGAGGGTCTGGAAGACGGCGACGCCGCC
GCTCCCAGCCTGCCCATGAAGCAAGACGACGAATTCCGTCCTTTCATCCG
CCGTCTCCCCGAGTTCAAGTTCTGGCACTCGGCCACTCGCGCCATTCTTA
TCGGCTTCGTTTGCTCGTGGTTCGCCGTCTTCGATATCCCGGTGTTCTGG
CCTGTCTTGGTGGTCTACTGGATTATTCTCTTTGTGTTGACCAGTACGTA
TACCAGTTCTGCTTATCTGTGGTGGGAGGCGAAACCGGCAGAAGGCTAAC
CCAAATTCACTACTAGTGCGCCGCCAGATCCAGCACATGATCAAGTACCG
CTACGTGCCGTTCTCGTTCGGTAAGACGCGGTACGGCCGGTCATAA
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Coding sequence (CDS) from alignment at OGUI01000008.1:736657..737452+

>ATCC64974_61180-T1 ID=ATCC64974_61180-T1|Name=ATCC64974_61180-T1|organism=Aspergillus niger N402|type=CDS|length=1710bp|location=Sequence derived from alignment at OGUI01000008.1:736657..737452+ (Aspergillus niger N402)
ATGGACGTTCCTGAGCCTGAGCAGACGCCTTTCACGGCCGTGACGGCGCA
AACCTCGAAGCTGGCTAGGCAATACCAAACCTACCTCGACGCCTCCACCC
CATTCACAGCCTACCGCTGGACCGGCACCGTCGTCCTGCTCCTCGTCTTC
TTCCTGAGAATCGTCCTCGCCCAGGGATGGTACATCGTGGCCTACACCCT
CGGCATCTACCTGCTCAACCTCTTCCTCCTCTTCCTGCAACCCAAGTTCG
ACCCCTCCCTGACGCAGGATGAGGGTCTGGAAGACGGCGACGCCGCCGCT
CCCAGCCTGCCCATGAAGCAAGACGACGAATTCCGTCCTTTCATCCGCCG
TCTCCCCGAGTTCAAGTTCTGGCACTCGGCCACTCGCGCCATTCTTATCG
GCTTCGTTTGCTCGTGGTTCGCCGTCTTCGATATCCCGGTGTTCTGGCCT
GTCTTGGTGGTCTACTGGATTATTCTCTTTGTGTTGACCATGCGCCGCCA
GATCCAGCACATGATCAAGTACCGCTACGTGCCGTTCTCGTTCGGTAAGA
CGCGGTACGGCCGGTCATAAATGGACGTTCCTGAGCCTGAGCAGACGCCT
TTCACGGCCGTGACGGCGCAAACCTCGAAGCTGGCTAGGCAATACCAAAC
CTACCTCGACGCCTCCACCCCATTCACAGCCTACCGCTGGACCGGCACCG
TCGTCCTGCTCCTCGTCTTCTTCCTGAGAATCGTCCTCGCCCAGGGATGG
TACATCGTGGCCTACACCCTCGGCATCTACCTGCTCAACCTCTTCCTCCT
CTTCCTGCAACCCAAGTTCGACCCCTCCCTGACGCAGGATGAGGGTCTGG
AAGACGGCGACGCCGCCGCTCCCAGCCTGCCCATGAAGCAAGACGACGAA
TTCCGTCCTTTCATCCGCCGTCTCCCCGAGTTCAAGTTCTGGCACTCGGC
CACTCGCGCCATTCTTATCGGCTTCGTTTGCTCGTGGTTCGCCGTCTTCG
ATATCCCGGTGTTCTGGCCTGTCTTGGTGGTCTACTGGATTATTCTCTTT
GTGTTGACCATGCGCCGCCAGATCCAGCACATGATCAAGTACCGCTACGT
GCCGTTCTCGTTCGGTAAGACGCGGTACGGCCGGTCATAAATGGACGTTC
CTGAGCCTGAGCAGACGCCTTTCACGGCCGTGACGGCGCAAACCTCGAAG
CTGGCTAGGCAATACCAAACCTACCTCGACGCCTCCACCCCATTCACAGC
CTACCGCTGGACCGGCACCGTCGTCCTGCTCCTCGTCTTCTTCCTGAGAA
TCGTCCTCGCCCAGGGATGGTACATCGTGGCCTACACCCTCGGCATCTAC
CTGCTCAACCTCTTCCTCCTCTTCCTGCAACCCAAGTTCGACCCCTCCCT
GACGCAGGATGAGGGTCTGGAAGACGGCGACGCCGCCGCTCCCAGCCTGC
CCATGAAGCAAGACGACGAATTCCGTCCTTTCATCCGCCGTCTCCCCGAG
TTCAAGTTCTGGCACTCGGCCACTCGCGCCATTCTTATCGGCTTCGTTTG
CTCGTGGTTCGCCGTCTTCGATATCCCGGTGTTCTGGCCTGTCTTGGTGG
TCTACTGGATTATTCTCTTTGTGTTGACCATGCGCCGCCAGATCCAGCAC
ATGATCAAGTACCGCTACGTGCCGTTCTCGTTCGGTAAGACGCGGTACGG
CCGGTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RER1ATCC64974_61180Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61180-T1.exon1ATCC64974_61180-T1.exon1Aspergillus niger N402exon
ATCC64974_61180-T1.exon2ATCC64974_61180-T1.exon2Aspergillus niger N402exon
ATCC64974_61180-T1.exon3ATCC64974_61180-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61180-T1.cdsATCC64974_61180-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_61180-T1ATCC64974_61180-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09265ANI
DBxrefInterPro:IPR004932
DBxrefPFAM:PF03248
Productretention in endoplasmic reticulum protein 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:736657..737452 +
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