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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000008.1:1063287..1063795- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_62200-T1 ID=ATCC64974_62200-T1|Name=ATCC64974_62200-T1|organism=Aspergillus niger N402|type=mRNA|length=509bp|location=Sequence derived from alignment at OGUI01000008.1:1063287..1063795- (Aspergillus niger N402)
ATGGTAATTACCTCTGAAGCCTACCATGATCCAATATATCTACTGCGTCT
ACTGACTCTCACATGAACAGTTACCTCTCGGTCTCCTGACGGCCGCGCAA
GGCCACCCCATGCTCGTGGAACTCAAGAACGGCGAAACCCTCAACGGACA
CCTCGCCAATTGCGACAACTGGATGAACCTGATACTCAAGGAAGTTGTTC
AGACGAGTCCCGAAGGTGACCGCTTCTTCCGGCTACCAGAGGTCTACGTC
AGAGGAAACAATGTGAGTATCTTGCCTGCGCCCACCCTAGATCCAATTTC
AGGGAATCTCCCCGGCCCTCCCTACTAACCGCTTATAGATCAAATACCTA
CGGATCCCCGAAGAAATCATAGAGATGGTCAAGGAGCAACAGGCGAACCA
GTCGCAAAATCGCAACCGCGGGCCGCGTGAGGGTGGTAGGGGTGACCGAG
GTCGTGGTGGAGGCCGGGGTCGTGGACGCGGCCGCGGCCGTGGTGGCAGG
GACGCTTGA back to topCoding sequence (CDS) from alignment at OGUI01000008.1:1063287..1063795- >ATCC64974_62200-T1 ID=ATCC64974_62200-T1|Name=ATCC64974_62200-T1|organism=Aspergillus niger N402|type=CDS|length=1098bp|location=Sequence derived from alignment at OGUI01000008.1:1063287..1063795- (Aspergillus niger N402)
ATCAAATACCTACGGATCCCCGAAGAAATCATAGAGATGGTCAAGGAGCA
ACAGGCGAACCAGTCGCAAAATCGCAACCGCGGGCCGCGTGAGGGTGGTA
GGGGTGACCGAGGTCGTGGTGGAGGCCGGGGTCGTGGACGCGGCCGCGGC
CGTGGTGGCAGGGACGCTTGATTACCTCTCGGTCTCCTGACGGCCGCGCA
AGGCCACCCCATGCTCGTGGAACTCAAGAACGGCGAAACCCTCAACGGAC
ACCTCGCCAATTGCGACAACTGGATGAACCTGATACTCAAGGAAGTTGTT
CAGACGAGTCCCGAAGGTGACCGCTTCTTCCGGCTACCAGAGGTCTACGT
CAGAGGAAACAATATGATCAAATACCTACGGATCCCCGAAGAAATCATAG
AGATGGTCAAGGAGCAACAGGCGAACCAGTCGCAAAATCGCAACCGCGGG
CCGCGTGAGGGTGGTAGGGGTGACCGAGGTCGTGGTGGAGGCCGGGGTCG
TGGACGCGGCCGCGGCCGTGGTGGCAGGGACGCTTGATTACCTCTCGGTC
TCCTGACGGCCGCGCAAGGCCACCCCATGCTCGTGGAACTCAAGAACGGC
GAAACCCTCAACGGACACCTCGCCAATTGCGACAACTGGATGAACCTGAT
ACTCAAGGAAGTTGTTCAGACGAGTCCCGAAGGTGACCGCTTCTTCCGGC
TACCAGAGGTCTACGTCAGAGGAAACAATATGATCAAATACCTACGGATC
CCCGAAGAAATCATAGAGATGGTCAAGGAGCAACAGGCGAACCAGTCGCA
AAATCGCAACCGCGGGCCGCGTGAGGGTGGTAGGGGTGACCGAGGTCGTG
GTGGAGGCCGGGGTCGTGGACGCGGCCGCGGCCGTGGTGGCAGGGACGCT
TGATTACCTCTCGGTCTCCTGACGGCCGCGCAAGGCCACCCCATGCTCGT
GGAACTCAAGAACGGCGAAACCCTCAACGGACACCTCGCCAATTGCGACA
ACTGGATGAACCTGATACTCAAGGAAGTTGTTCAGACGAGTCCCGAAGGT
GACCGCTTCTTCCGGCTACCAGAGGTCTACGTCAGAGGAAACAATATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000956 | nuclear-transcribed mRNA catabolic process |
| GO:0000398 | mRNA splicing, via spliceosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_62200-T1 | ATCC64974_62200-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010920 |
| DBxref | InterPro:IPR034101 |
| DBxref | InterPro:IPR001163 |
| DBxref | PFAM:PF01423 |
| Product | RNA processing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000008.1 | supercontig | OGUI01000008.1:1063287..1063795 - |
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