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ATCC64974_64330-T1, ATCC64974_64330-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_64330-T1
Unique NameATCC64974_64330-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:366895..367755-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_64330-T1 ID=ATCC64974_64330-T1|Name=ATCC64974_64330-T1|organism=Aspergillus niger N402|type=mRNA|length=861bp|location=Sequence derived from alignment at OGUI01000010.1:366895..367755- (Aspergillus niger N402)
ATGTCTGCCAATCGAGCAAGGCGTATCGCCAAAGAGATCGCCGACATCCA
CGCCGACACACAGTCGCAAATCACGGCTGAACCACTGCACGGTGGGGAGG
ATCTTACACATCTTCGAGGCACGTTCCCAGGGCCTCCAGGAACACCCTAT
GAAGGTGGAACCTATACCATCGACATTAAAATCCCCAACGATTATCCATT
TCGGCCTCCCCACATGAAGTTTGTAACCAAGGTCTGGCATCCCAACGTCA
GCAGTCAAACAGTAAGTCACCTCCAGTCATGTATGCTCAGGCTGTCTCTA
GTTTCCTGTTAATAAAGCTGATTGCCCAGGGTGCCATCTGCCTAGACACT
CTTTCCACTGCGTGGTCGCCGGTGCTCACCATCAAGTCTGCCCTTCTGTC
ACTGCAATCCCTGCTAAGCACACCCGAACCCAAAGATCCCCAAGATGCTG
AGGTCGCCACGATGCTCCTTCGGAGACCGCAGGAGTTTGCACGAGTTGCT
CAGGAGTGGGCTGTAATGTATGCAGGAGCTCCCAGAAGGCATGCAGGTGA
AGGCAGCGGCGGTGTGACAGACGAAACTCTTCGACTGCAGGAGATCAAGT
CGAAAGAAGAGCAGGAACAAGAGGATTTAAGCAAGTATGTACACGTGTGT
AGGACAAACCTAATCTTGGCTAATCTTTCTGTGCAGATACGACGGCTACA
ACAAAGACTTGATCGACCGATTCTGTAACATGGGATTTGACGTCGACCGC
GTTGTAGCCGCATTCAAATACTACGGCATTGATCGAATGGACGGAGAAGA
CTACGAGCTGGAGGAGGCGTACATGGGAGACATTACAGCGCGGCTCCTCG
GCGAGCCGTAG
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Coding sequence (CDS) from alignment at OGUI01000010.1:366895..367755-

>ATCC64974_64330-T1 ID=ATCC64974_64330-T1|Name=ATCC64974_64330-T1|organism=Aspergillus niger N402|type=CDS|length=2223bp|location=Sequence derived from alignment at OGUI01000010.1:366895..367755- (Aspergillus niger N402)
ATACGACGGCTACAACAAAGACTTGATCGACCGATTCTGTAACATGGGAT
TTGACGTCGACCGCGTTGTAGCCGCATTCAAATACTACGGCATTGATCGA
ATGGACGGAGAAGACTACGAGCTGGAGGAGGCGTACATGGGAGACATTAC
AGCGCGGCTCCTCGGCGAGCCGTAGGGTGCCATCTGCCTAGACACTCTTT
CCACTGCGTGGTCGCCGGTGCTCACCATCAAGTCTGCCCTTCTGTCACTG
CAATCCCTGCTAAGCACACCCGAACCCAAAGATCCCCAAGATGCTGAGGT
CGCCACGATGCTCCTTCGGAGACCGCAGGAGTTTGCACGAGTTGCTCAGG
AGTGGGCTGTAATGTATGCAGGAGCTCCCAGAAGGCATGCAGGTGAAGGC
AGCGGCGGTGTGACAGACGAAACTCTTCGACTGCAGGAGATCAAGTCGAA
AGAAGAGCAGGAACAAGAGGATTTAAGCAAATGTCTGCCAATCGAGCAAG
GCGTATCGCCAAAGAGATCGCCGACATCCACGCCGACACACAGTCGCAAA
TCACGGCTGAACCACTGCACGGTGGGGAGGATCTTACACATCTTCGAGGC
ACGTTCCCAGGGCCTCCAGGAACACCCTATGAAGGTGGAACCTATACCAT
CGACATTAAAATCCCCAACGATTATCCATTTCGGCCTCCCCACATGAAGT
TTGTAACCAAGGTCTGGCATCCCAACGTCAGCAGTCAAACAATACGACGG
CTACAACAAAGACTTGATCGACCGATTCTGTAACATGGGATTTGACGTCG
ACCGCGTTGTAGCCGCATTCAAATACTACGGCATTGATCGAATGGACGGA
GAAGACTACGAGCTGGAGGAGGCGTACATGGGAGACATTACAGCGCGGCT
CCTCGGCGAGCCGTAGGGTGCCATCTGCCTAGACACTCTTTCCACTGCGT
GGTCGCCGGTGCTCACCATCAAGTCTGCCCTTCTGTCACTGCAATCCCTG
CTAAGCACACCCGAACCCAAAGATCCCCAAGATGCTGAGGTCGCCACGAT
GCTCCTTCGGAGACCGCAGGAGTTTGCACGAGTTGCTCAGGAGTGGGCTG
TAATGTATGCAGGAGCTCCCAGAAGGCATGCAGGTGAAGGCAGCGGCGGT
GTGACAGACGAAACTCTTCGACTGCAGGAGATCAAGTCGAAAGAAGAGCA
GGAACAAGAGGATTTAAGCAAATGTCTGCCAATCGAGCAAGGCGTATCGC
CAAAGAGATCGCCGACATCCACGCCGACACACAGTCGCAAATCACGGCTG
AACCACTGCACGGTGGGGAGGATCTTACACATCTTCGAGGCACGTTCCCA
GGGCCTCCAGGAACACCCTATGAAGGTGGAACCTATACCATCGACATTAA
AATCCCCAACGATTATCCATTTCGGCCTCCCCACATGAAGTTTGTAACCA
AGGTCTGGCATCCCAACGTCAGCAGTCAAACAATACGACGGCTACAACAA
AGACTTGATCGACCGATTCTGTAACATGGGATTTGACGTCGACCGCGTTG
TAGCCGCATTCAAATACTACGGCATTGATCGAATGGACGGAGAAGACTAC
GAGCTGGAGGAGGCGTACATGGGAGACATTACAGCGCGGCTCCTCGGCGA
GCCGTAGGGTGCCATCTGCCTAGACACTCTTTCCACTGCGTGGTCGCCGG
TGCTCACCATCAAGTCTGCCCTTCTGTCACTGCAATCCCTGCTAAGCACA
CCCGAACCCAAAGATCCCCAAGATGCTGAGGTCGCCACGATGCTCCTTCG
GAGACCGCAGGAGTTTGCACGAGTTGCTCAGGAGTGGGCTGTAATGTATG
CAGGAGCTCCCAGAAGGCATGCAGGTGAAGGCAGCGGCGGTGTGACAGAC
GAAACTCTTCGACTGCAGGAGATCAAGTCGAAAGAAGAGCAGGAACAAGA
GGATTTAAGCAAATGTCTGCCAATCGAGCAAGGCGTATCGCCAAAGAGAT
CGCCGACATCCACGCCGACACACAGTCGCAAATCACGGCTGAACCACTGC
ACGGTGGGGAGGATCTTACACATCTTCGAGGCACGTTCCCAGGGCCTCCA
GGAACACCCTATGAAGGTGGAACCTATACCATCGACATTAAAATCCCCAA
CGATTATCCATTTCGGCCTCCCCACATGAAGTTTGTAACCAAGGTCTGGC
ATCCCAACGTCAGCAGTCAAACA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBC1_1ATCC64974_64330Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_64330-T1ATCC64974_64330-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_64330-T1.cdsATCC64974_64330-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_64330-T1.exon3ATCC64974_64330-T1.exon3Aspergillus niger N402exon
ATCC64974_64330-T1.exon2ATCC64974_64330-T1.exon2Aspergillus niger N402exon
ATCC64974_64330-T1.exon1ATCC64974_64330-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR009060
DBxrefInterPro:IPR023313
DBxrefInterPro:IPR015368
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR000608
DBxrefPFAM:PF00179
DBxrefPFAM:PF09288
ProductUbiquitin-conjugating enzyme E2 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:366895..367755 -
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