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ATCC64974_65220-T1, ATCC64974_65220-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_65220-T1
Unique NameATCC64974_65220-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:642410..643411+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_65220-T1 ID=ATCC64974_65220-T1|Name=ATCC64974_65220-T1|organism=Aspergillus niger N402|type=mRNA|length=1002bp|location=Sequence derived from alignment at OGUI01000010.1:642410..643411+ (Aspergillus niger N402)
ATGGGTCGCGTGATCCGCAACCAGAGGAAGGGTCGTGGATCCATTTTCAG
TGAGTGCGACCGCAGAGATCCTGAAGCGAAATTCGCAGCATCTCCAGATC
AATTTTTACTGATACAATTTTTCGCTCGACAGCGGCAAACACCCGTCTCA
ACAAGGCTCCTGCCCAGTTCCGCACCCTCGACTACGCCGAGCGTCATGGA
TACACTCGTGGTGTCGTGAAGGAGATCATCCACGACCCCGGCCGTGGTGC
TCCCCTCGCCAAGGTCCAGTTCCGTCACCCCTACAAGTTCAAGACCATCA
CCGAGACCTTCATCGCCAACGAGGGCATGTACACCGGTCAATTCGTCTAC
GCCGGAAAGAACGCCGCCCTGACTGTCGGAAACGTCCTTCCCCTCGCCTC
CGTCCCTGAGGGTACCGTTGTGACCAACGTCGAGGAGAAGGCTGGTGACC
GTGGTGCTCTTGGTCGTACCTCCGGTAACTACGTTACCGTCATCGGCCAC
AACCCCGAGGAGGGCAAGACCCGTGTCAAGCTTCCCTCCGGTGCCAAGAA
GGTCGTCAAGAACACCGCCCGTGGTATGATCGGTATCGTCGCTGGTGGTG
GTCGTACCGACAAGCCTTTGCTGAGTATGTCTCCGGAAATCTGGCTCCGT
TGAATCACTCTTCGGAGAGAATACGGTTAAAGAAGAGGACTTTGATGGCT
AACTCATTCCCTACAGAGGCTTCTCGCGCCAAGCACAAGTTCGCTGTCAA
GCGCAACTCTTGGCCCAAGACCCGTGGTGTTGCCATGAACCCCGTGGATC
ACGTAAGGCTCCCTTCAATGATTTTGTCGATTTATCTACAGATTCTGACA
TGTTTTCTCTACAGCCTCACGGTGGTGGTAACCACCAGCACATTGGTAAG
GCCTCGACCATCTCCCGCTACGCTGCCCAGGGTCAAAAAGCCGGTCTTAT
CGCTGCCCGGAGAACTGGTCTGCTCCGTGGTACCCAGAAGACCAAGGAGT
AA
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Coding sequence (CDS) from alignment at OGUI01000010.1:642410..643411+

>ATCC64974_65220-T1 ID=ATCC64974_65220-T1|Name=ATCC64974_65220-T1|organism=Aspergillus niger N402|type=CDS|length=3060bp|location=Sequence derived from alignment at OGUI01000010.1:642410..643411+ (Aspergillus niger N402)
ATGGGTCGCGTGATCCGCAACCAGAGGAAGGGTCGTGGATCCATTTTCAC
GGCAAACACCCGTCTCAACAAGGCTCCTGCCCAGTTCCGCACCCTCGACT
ACGCCGAGCGTCATGGATACACTCGTGGTGTCGTGAAGGAGATCATCCAC
GACCCCGGCCGTGGTGCTCCCCTCGCCAAGGTCCAGTTCCGTCACCCCTA
CAAGTTCAAGACCATCACCGAGACCTTCATCGCCAACGAGGGCATGTACA
CCGGTCAATTCGTCTACGCCGGAAAGAACGCCGCCCTGACTGTCGGAAAC
GTCCTTCCCCTCGCCTCCGTCCCTGAGGGTACCGTTGTGACCAACGTCGA
GGAGAAGGCTGGTGACCGTGGTGCTCTTGGTCGTACCTCCGGTAACTACG
TTACCGTCATCGGCCACAACCCCGAGGAGGGCAAGACCCGTGTCAAGCTT
CCCTCCGGTGCCAAGAAGGTCGTCAAGAACACCGCCCGTGGTATGATCGG
TATCGTCGCTGGTGGTGGTCGTACCGACAAGCCTTTGCTGAAGGCTTCTC
GCGCCAAGCACAAGTTCGCTGTCAAGCGCAACTCTTGGCCCAAGACCCGT
GGTGTTGCCATGAACCCCGTGGATCACCCTCACGGTGGTGGTAACCACCA
GCACATTGGTAAGGCCTCGACCATCTCCCGCTACGCTGCCCAGGGTCAAA
AAGCCGGTCTTATCGCTGCCCGGAGAACTGGTCTGCTCCGTGGTACCCAG
AAGACCAAGGAGTAAATGGGTCGCGTGATCCGCAACCAGAGGAAGGGTCG
TGGATCCATTTTCACGGCAAACACCCGTCTCAACAAGGCTCCTGCCCAGT
TCCGCACCCTCGACTACGCCGAGCGTCATGGATACACTCGTGGTGTCGTG
AAGGAGATCATCCACGACCCCGGCCGTGGTGCTCCCCTCGCCAAGGTCCA
GTTCCGTCACCCCTACAAGTTCAAGACCATCACCGAGACCTTCATCGCCA
ACGAGGGCATGTACACCGGTCAATTCGTCTACGCCGGAAAGAACGCCGCC
CTGACTGTCGGAAACGTCCTTCCCCTCGCCTCCGTCCCTGAGGGTACCGT
TGTGACCAACGTCGAGGAGAAGGCTGGTGACCGTGGTGCTCTTGGTCGTA
CCTCCGGTAACTACGTTACCGTCATCGGCCACAACCCCGAGGAGGGCAAG
ACCCGTGTCAAGCTTCCCTCCGGTGCCAAGAAGGTCGTCAAGAACACCGC
CCGTGGTATGATCGGTATCGTCGCTGGTGGTGGTCGTACCGACAAGCCTT
TGCTGAAGGCTTCTCGCGCCAAGCACAAGTTCGCTGTCAAGCGCAACTCT
TGGCCCAAGACCCGTGGTGTTGCCATGAACCCCGTGGATCACCCTCACGG
TGGTGGTAACCACCAGCACATTGGTAAGGCCTCGACCATCTCCCGCTACG
CTGCCCAGGGTCAAAAAGCCGGTCTTATCGCTGCCCGGAGAACTGGTCTG
CTCCGTGGTACCCAGAAGACCAAGGAGTAAATGGGTCGCGTGATCCGCAA
CCAGAGGAAGGGTCGTGGATCCATTTTCACGGCAAACACCCGTCTCAACA
AGGCTCCTGCCCAGTTCCGCACCCTCGACTACGCCGAGCGTCATGGATAC
ACTCGTGGTGTCGTGAAGGAGATCATCCACGACCCCGGCCGTGGTGCTCC
CCTCGCCAAGGTCCAGTTCCGTCACCCCTACAAGTTCAAGACCATCACCG
AGACCTTCATCGCCAACGAGGGCATGTACACCGGTCAATTCGTCTACGCC
GGAAAGAACGCCGCCCTGACTGTCGGAAACGTCCTTCCCCTCGCCTCCGT
CCCTGAGGGTACCGTTGTGACCAACGTCGAGGAGAAGGCTGGTGACCGTG
GTGCTCTTGGTCGTACCTCCGGTAACTACGTTACCGTCATCGGCCACAAC
CCCGAGGAGGGCAAGACCCGTGTCAAGCTTCCCTCCGGTGCCAAGAAGGT
CGTCAAGAACACCGCCCGTGGTATGATCGGTATCGTCGCTGGTGGTGGTC
GTACCGACAAGCCTTTGCTGAAGGCTTCTCGCGCCAAGCACAAGTTCGCT
GTCAAGCGCAACTCTTGGCCCAAGACCCGTGGTGTTGCCATGAACCCCGT
GGATCACCCTCACGGTGGTGGTAACCACCAGCACATTGGTAAGGCCTCGA
CCATCTCCCGCTACGCTGCCCAGGGTCAAAAAGCCGGTCTTATCGCTGCC
CGGAGAACTGGTCTGCTCCGTGGTACCCAGAAGACCAAGGAGTAAATGGG
TCGCGTGATCCGCAACCAGAGGAAGGGTCGTGGATCCATTTTCACGGCAA
ACACCCGTCTCAACAAGGCTCCTGCCCAGTTCCGCACCCTCGACTACGCC
GAGCGTCATGGATACACTCGTGGTGTCGTGAAGGAGATCATCCACGACCC
CGGCCGTGGTGCTCCCCTCGCCAAGGTCCAGTTCCGTCACCCCTACAAGT
TCAAGACCATCACCGAGACCTTCATCGCCAACGAGGGCATGTACACCGGT
CAATTCGTCTACGCCGGAAAGAACGCCGCCCTGACTGTCGGAAACGTCCT
TCCCCTCGCCTCCGTCCCTGAGGGTACCGTTGTGACCAACGTCGAGGAGA
AGGCTGGTGACCGTGGTGCTCTTGGTCGTACCTCCGGTAACTACGTTACC
GTCATCGGCCACAACCCCGAGGAGGGCAAGACCCGTGTCAAGCTTCCCTC
CGGTGCCAAGAAGGTCGTCAAGAACACCGCCCGTGGTATGATCGGTATCG
TCGCTGGTGGTGGTCGTACCGACAAGCCTTTGCTGAAGGCTTCTCGCGCC
AAGCACAAGTTCGCTGTCAAGCGCAACTCTTGGCCCAAGACCCGTGGTGT
TGCCATGAACCCCGTGGATCACCCTCACGGTGGTGGTAACCACCAGCACA
TTGGTAAGGCCTCGACCATCTCCCGCTACGCTGCCCAGGGTCAAAAAGCC
GGTCTTATCGCTGCCCGGAGAACTGGTCTGCTCCGTGGTACCCAGAAGAC
CAAGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL2ATCC64974_65220Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_65220-T1.exon1ATCC64974_65220-T1.exon1Aspergillus niger N402exon
ATCC64974_65220-T1.exon2ATCC64974_65220-T1.exon2Aspergillus niger N402exon
ATCC64974_65220-T1.exon3ATCC64974_65220-T1.exon3Aspergillus niger N402exon
ATCC64974_65220-T1.exon4ATCC64974_65220-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_65220-T1.cdsATCC64974_65220-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_65220-T1ATCC64974_65220-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR022671
DBxrefInterPro:IPR022666
DBxrefInterPro:IPR014722
DBxrefInterPro:IPR014726
DBxrefInterPro:IPR002171
DBxrefInterPro:IPR022669
DBxrefPFAM:PF03947
DBxrefPFAM:PF00181
Product60S ribosomal protein L2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:642410..643411 +
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