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ATCC64974_65890-T1, ATCC64974_65890-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_65890-T1
Unique NameATCC64974_65890-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:872785..874265-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_65890-T1 ID=ATCC64974_65890-T1|Name=ATCC64974_65890-T1|organism=Aspergillus niger N402|type=mRNA|length=1481bp|location=Sequence derived from alignment at OGUI01000010.1:872785..874265- (Aspergillus niger N402)
ATGAGCGCGGCTCAGCCGAACGAAGCGGAGAAGAACATCGAGATATGGAA
GGTGAAGAAACTCATTAAGCGGCTTGAGGCCGCTAGAGGAAACGGAACCT
CCATGATCTCTCTTATCATTCGTACGTCTTCCGTCCAGTCAACTCGTCAT
TAGAATACTTCTAATTATCGGTTCTTCTTTGCAGCCCCCAAGGATCAGAT
TTCTAGAGCAGCAAAGATGTTGGCGGAAGAGTTTGTAAGTGGCTTGACTG
AGGGAGACACGGCCAGTCCAGTAAAGTTGCTAATCACATATTACAGGGCA
CTGCGTCTAACATCAAGTCTCGTGTCAACCGTCTTTCCGTCCTTTCCGCT
ATTACTTCGACGCAACAACGTCTCAAGCTCTACAATAAGGTGCCGCCGAA
TGGTCTAGTGGTTTATTGCGGTGAAATTATCACCTCTGAAGGAAAGGAGC
GCAAGATCAACATTGATTTCGAGCCTTTCAAGCCAATCAACACCTCGTTG
TATCTCTGTGATAACAAGTTCCACACTGAGGCTCTTAGTGAGCTTCTTGA
ATCCGATCAGAAGTTTGGTTTCATCGTCATGGATGGAAACGGTGCCCTGT
TCGGTACCTTGAGCGGCAACACCAGAGAAATCCTGCAAAAGTTGAGCGTT
GATCTGCCCAAGAAGCACGGCCGTGGTGGTCAGTCAGCATTGCGTTTCGC
TCGTCTTCGTGAGGAGAAGCGCCACAACTACGTACGCAAGATTGCCGAGT
TGGCTGTTCAGAACTACATCACCAATGACAAGGTCAATGTTGCAGGATTG
ATCTTGGCCGGTTCTGCCGATTTTAAAAACGACCTGAATCAGTCCGATAT
GTTCGACCAGAGATTGCAGGCTAAGGTCATCAAGGTTGTCGACGTGTCTT
ATGGTGGCGAGAACGGCTTTAACCAGGCTATCGAACTGGCATCTGAGACC
TTGAGCAACGTCAAATTTGTTCAGGAGAAGAAGCTTATCGGAAAGTATTT
CGAAGAAATCAGTCAGGATACTGGAAAGGTCTGTTATGGCATTGACGATA
CATTGAAGGCTTTGGAGCTTGGTGCGGCGGAGACACTGATCGTATATGAG
AACCTTGACGTTACCCGGCACGTTCTCAAGAGCTCCAGCGGTTCGGATGT
CGTCATCCACACTACCAAGTCACAGGAAGAGAACCGTGAACTGTTCATGG
ACAAGGAGACTGGCGCTGAGATGGAAGTGAGCGAGCAGCAGTCGTTCCTT
GAGTGGCTTGCTGAAAGCTACAAGGACTTTGGAGCAACCCTGGAGTTCGT
CTCCGACAAGTCCAGTGAAGGAAATCAGTTTGTCAAAGGTTTCGGTGGTA
TCGGAGCCATCCTTCGGTACAAGGTCAACTTTGAACAGCTTGCTGACTAC
GATGACGAGGATGAATTCTACGACGGTATGTTTAACTCAATGTCGGTGTT
ATTCGTGTGCTAACCACTCCCTATAGATTGA
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Coding sequence (CDS) from alignment at OGUI01000010.1:872785..874265-

>ATCC64974_65890-T1 ID=ATCC64974_65890-T1|Name=ATCC64974_65890-T1|organism=Aspergillus niger N402|type=CDS|length=5220bp|location=Sequence derived from alignment at OGUI01000010.1:872785..874265- (Aspergillus niger N402)
ATTGAGGCACTGCGTCTAACATCAAGTCTCGTGTCAACCGTCTTTCCGTC
CTTTCCGCTATTACTTCGACGCAACAACGTCTCAAGCTCTACAATAAGGT
GCCGCCGAATGGTCTAGTGGTTTATTGCGGTGAAATTATCACCTCTGAAG
GAAAGGAGCGCAAGATCAACATTGATTTCGAGCCTTTCAAGCCAATCAAC
ACCTCGTTGTATCTCTGTGATAACAAGTTCCACACTGAGGCTCTTAGTGA
GCTTCTTGAATCCGATCAGAAGTTTGGTTTCATCGTCATGGATGGAAACG
GTGCCCTGTTCGGTACCTTGAGCGGCAACACCAGAGAAATCCTGCAAAAG
TTGAGCGTTGATCTGCCCAAGAAGCACGGCCGTGGTGGTCAGTCAGCATT
GCGTTTCGCTCGTCTTCGTGAGGAGAAGCGCCACAACTACGTACGCAAGA
TTGCCGAGTTGGCTGTTCAGAACTACATCACCAATGACAAGGTCAATGTT
GCAGGATTGATCTTGGCCGGTTCTGCCGATTTTAAAAACGACCTGAATCA
GTCCGATATGTTCGACCAGAGATTGCAGGCTAAGGTCATCAAGGTTGTCG
ACGTGTCTTATGGTGGCGAGAACGGCTTTAACCAGGCTATCGAACTGGCA
TCTGAGACCTTGAGCAACGTCAAATTTGTTCAGGAGAAGAAGCTTATCGG
AAAGTATTTCGAAGAAATCAGTCAGGATACTGGAAAGGTCTGTTATGGCA
TTGACGATACATTGAAGGCTTTGGAGCTTGGTGCGGCGGAGACACTGATC
GTATATGAGAACCTTGACGTTACCCGGCACGTTCTCAAGAGCTCCAGCGG
TTCGGATGTCGTCATCCACACTACCAAGTCACAGGAAGAGAACCGTGAAC
TGTTCATGGACAAGGAGACTGGCGCTGAGATGGAAGTGAGCGAGCAGCAG
TCGTTCCTTGAGTGGCTTGCTGAAAGCTACAAGGACTTTGGAGCAACCCT
GGAGTTCGTCTCCGACAAGTCCAGTGAAGGAAATCAGTTTGTCAAAGGTT
TCGGTGGTATCGGAGCCATCCTTCGGTACAAGGTCAACTTTGAACAGCTT
GCTGACTACGATGACGAGGATGAATTCTACGACGCCCCCAAGGATCAGAT
TTCTAGAGCAGCAAAGATGTTGGCGGAAGAGTTTATGAGCGCGGCTCAGC
CGAACGAAGCGGAGAAGAACATCGAGATATGGAAGGTGAAGAAACTCATT
AAGCGGCTTGAGGCCGCTAGAGGAAACGGAACCTCCATGATCTCTCTTAT
CATTCATTGAGGCACTGCGTCTAACATCAAGTCTCGTGTCAACCGTCTTT
CCGTCCTTTCCGCTATTACTTCGACGCAACAACGTCTCAAGCTCTACAAT
AAGGTGCCGCCGAATGGTCTAGTGGTTTATTGCGGTGAAATTATCACCTC
TGAAGGAAAGGAGCGCAAGATCAACATTGATTTCGAGCCTTTCAAGCCAA
TCAACACCTCGTTGTATCTCTGTGATAACAAGTTCCACACTGAGGCTCTT
AGTGAGCTTCTTGAATCCGATCAGAAGTTTGGTTTCATCGTCATGGATGG
AAACGGTGCCCTGTTCGGTACCTTGAGCGGCAACACCAGAGAAATCCTGC
AAAAGTTGAGCGTTGATCTGCCCAAGAAGCACGGCCGTGGTGGTCAGTCA
GCATTGCGTTTCGCTCGTCTTCGTGAGGAGAAGCGCCACAACTACGTACG
CAAGATTGCCGAGTTGGCTGTTCAGAACTACATCACCAATGACAAGGTCA
ATGTTGCAGGATTGATCTTGGCCGGTTCTGCCGATTTTAAAAACGACCTG
AATCAGTCCGATATGTTCGACCAGAGATTGCAGGCTAAGGTCATCAAGGT
TGTCGACGTGTCTTATGGTGGCGAGAACGGCTTTAACCAGGCTATCGAAC
TGGCATCTGAGACCTTGAGCAACGTCAAATTTGTTCAGGAGAAGAAGCTT
ATCGGAAAGTATTTCGAAGAAATCAGTCAGGATACTGGAAAGGTCTGTTA
TGGCATTGACGATACATTGAAGGCTTTGGAGCTTGGTGCGGCGGAGACAC
TGATCGTATATGAGAACCTTGACGTTACCCGGCACGTTCTCAAGAGCTCC
AGCGGTTCGGATGTCGTCATCCACACTACCAAGTCACAGGAAGAGAACCG
TGAACTGTTCATGGACAAGGAGACTGGCGCTGAGATGGAAGTGAGCGAGC
AGCAGTCGTTCCTTGAGTGGCTTGCTGAAAGCTACAAGGACTTTGGAGCA
ACCCTGGAGTTCGTCTCCGACAAGTCCAGTGAAGGAAATCAGTTTGTCAA
AGGTTTCGGTGGTATCGGAGCCATCCTTCGGTACAAGGTCAACTTTGAAC
AGCTTGCTGACTACGATGACGAGGATGAATTCTACGACGCCCCCAAGGAT
CAGATTTCTAGAGCAGCAAAGATGTTGGCGGAAGAGTTTATGAGCGCGGC
TCAGCCGAACGAAGCGGAGAAGAACATCGAGATATGGAAGGTGAAGAAAC
TCATTAAGCGGCTTGAGGCCGCTAGAGGAAACGGAACCTCCATGATCTCT
CTTATCATTCATTGAGGCACTGCGTCTAACATCAAGTCTCGTGTCAACCG
TCTTTCCGTCCTTTCCGCTATTACTTCGACGCAACAACGTCTCAAGCTCT
ACAATAAGGTGCCGCCGAATGGTCTAGTGGTTTATTGCGGTGAAATTATC
ACCTCTGAAGGAAAGGAGCGCAAGATCAACATTGATTTCGAGCCTTTCAA
GCCAATCAACACCTCGTTGTATCTCTGTGATAACAAGTTCCACACTGAGG
CTCTTAGTGAGCTTCTTGAATCCGATCAGAAGTTTGGTTTCATCGTCATG
GATGGAAACGGTGCCCTGTTCGGTACCTTGAGCGGCAACACCAGAGAAAT
CCTGCAAAAGTTGAGCGTTGATCTGCCCAAGAAGCACGGCCGTGGTGGTC
AGTCAGCATTGCGTTTCGCTCGTCTTCGTGAGGAGAAGCGCCACAACTAC
GTACGCAAGATTGCCGAGTTGGCTGTTCAGAACTACATCACCAATGACAA
GGTCAATGTTGCAGGATTGATCTTGGCCGGTTCTGCCGATTTTAAAAACG
ACCTGAATCAGTCCGATATGTTCGACCAGAGATTGCAGGCTAAGGTCATC
AAGGTTGTCGACGTGTCTTATGGTGGCGAGAACGGCTTTAACCAGGCTAT
CGAACTGGCATCTGAGACCTTGAGCAACGTCAAATTTGTTCAGGAGAAGA
AGCTTATCGGAAAGTATTTCGAAGAAATCAGTCAGGATACTGGAAAGGTC
TGTTATGGCATTGACGATACATTGAAGGCTTTGGAGCTTGGTGCGGCGGA
GACACTGATCGTATATGAGAACCTTGACGTTACCCGGCACGTTCTCAAGA
GCTCCAGCGGTTCGGATGTCGTCATCCACACTACCAAGTCACAGGAAGAG
AACCGTGAACTGTTCATGGACAAGGAGACTGGCGCTGAGATGGAAGTGAG
CGAGCAGCAGTCGTTCCTTGAGTGGCTTGCTGAAAGCTACAAGGACTTTG
GAGCAACCCTGGAGTTCGTCTCCGACAAGTCCAGTGAAGGAAATCAGTTT
GTCAAAGGTTTCGGTGGTATCGGAGCCATCCTTCGGTACAAGGTCAACTT
TGAACAGCTTGCTGACTACGATGACGAGGATGAATTCTACGACGCCCCCA
AGGATCAGATTTCTAGAGCAGCAAAGATGTTGGCGGAAGAGTTTATGAGC
GCGGCTCAGCCGAACGAAGCGGAGAAGAACATCGAGATATGGAAGGTGAA
GAAACTCATTAAGCGGCTTGAGGCCGCTAGAGGAAACGGAACCTCCATGA
TCTCTCTTATCATTCATTGAGGCACTGCGTCTAACATCAAGTCTCGTGTC
AACCGTCTTTCCGTCCTTTCCGCTATTACTTCGACGCAACAACGTCTCAA
GCTCTACAATAAGGTGCCGCCGAATGGTCTAGTGGTTTATTGCGGTGAAA
TTATCACCTCTGAAGGAAAGGAGCGCAAGATCAACATTGATTTCGAGCCT
TTCAAGCCAATCAACACCTCGTTGTATCTCTGTGATAACAAGTTCCACAC
TGAGGCTCTTAGTGAGCTTCTTGAATCCGATCAGAAGTTTGGTTTCATCG
TCATGGATGGAAACGGTGCCCTGTTCGGTACCTTGAGCGGCAACACCAGA
GAAATCCTGCAAAAGTTGAGCGTTGATCTGCCCAAGAAGCACGGCCGTGG
TGGTCAGTCAGCATTGCGTTTCGCTCGTCTTCGTGAGGAGAAGCGCCACA
ACTACGTACGCAAGATTGCCGAGTTGGCTGTTCAGAACTACATCACCAAT
GACAAGGTCAATGTTGCAGGATTGATCTTGGCCGGTTCTGCCGATTTTAA
AAACGACCTGAATCAGTCCGATATGTTCGACCAGAGATTGCAGGCTAAGG
TCATCAAGGTTGTCGACGTGTCTTATGGTGGCGAGAACGGCTTTAACCAG
GCTATCGAACTGGCATCTGAGACCTTGAGCAACGTCAAATTTGTTCAGGA
GAAGAAGCTTATCGGAAAGTATTTCGAAGAAATCAGTCAGGATACTGGAA
AGGTCTGTTATGGCATTGACGATACATTGAAGGCTTTGGAGCTTGGTGCG
GCGGAGACACTGATCGTATATGAGAACCTTGACGTTACCCGGCACGTTCT
CAAGAGCTCCAGCGGTTCGGATGTCGTCATCCACACTACCAAGTCACAGG
AAGAGAACCGTGAACTGTTCATGGACAAGGAGACTGGCGCTGAGATGGAA
GTGAGCGAGCAGCAGTCGTTCCTTGAGTGGCTTGCTGAAAGCTACAAGGA
CTTTGGAGCAACCCTGGAGTTCGTCTCCGACAAGTCCAGTGAAGGAAATC
AGTTTGTCAAAGGTTTCGGTGGTATCGGAGCCATCCTTCGGTACAAGGTC
AACTTTGAACAGCTTGCTGACTACGATGACGAGGATGAATTCTACGACGC
CCCCAAGGATCAGATTTCTAGAGCAGCAAAGATGTTGGCGGAAGAGTTTA
TGAGCGCGGCTCAGCCGAACGAAGCGGAGAAGAACATCGAGATATGGAAG
GTGAAGAAACTCATTAAGCGGCTTGAGGCCGCTAGAGGAAACGGAACCTC
CATGATCTCTCTTATCATTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003747translation release factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006415translational termination
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SU2ATCC64974_65890Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_65890-T1ATCC64974_65890-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_65890-T1.cdsATCC64974_65890-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_65890-T1.exon4ATCC64974_65890-T1.exon4Aspergillus niger N402exon
ATCC64974_65890-T1.exon3ATCC64974_65890-T1.exon3Aspergillus niger N402exon
ATCC64974_65890-T1.exon2ATCC64974_65890-T1.exon2Aspergillus niger N402exon
ATCC64974_65890-T1.exon1ATCC64974_65890-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09262CDO
DBxrefInterPro:IPR024049
DBxrefInterPro:IPR004403
DBxrefInterPro:IPR005142
DBxrefInterPro:IPR005141
DBxrefInterPro:IPR042226
DBxrefInterPro:IPR029064
DBxrefInterPro:IPR005140
DBxrefPFAM:PF03465
DBxrefPFAM:PF03464
DBxrefPFAM:PF03463
DBxrefPFAM:PF18854
DBxrefPFAM:PF18859
ProductEukaryotic peptide chain release factor subunit 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:872785..874265 -
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