You are here

Home

ATCC64974_65930-T1, ATCC64974_65930-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_65930-T1
Unique NameATCC64974_65930-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:882950..885100-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_65930-T1 ID=ATCC64974_65930-T1|Name=ATCC64974_65930-T1|organism=Aspergillus niger N402|type=mRNA|length=2151bp|location=Sequence derived from alignment at OGUI01000010.1:882950..885100- (Aspergillus niger N402)
ATGAGCCCGACACGTTCTGCGCCGCTAACCTCACGGCCTACATCTTGTGG
AAAAGCGGTTCCCAAGCCACGACCCCGCTTAGAGCCCTCACCTTTACCTC
TGCAGCCTGTTGAGCATGTGCCGTCGACACAAGGTCAATTCTTAAATGCG
ACCGCTTCTACGACGCACAACGTTTCGCCGGCAAAAGCCGTTCGCGGCTC
AAGTAGCCTGTTTTCTGGACATGGAAATCTAGGATATGTTTCCATCACAG
CGCCCCCCGCTCCAGAATTTATAACAGATTCTCCTTCCAAACACCCCTCC
TTCGGATATCACCACACCGCTGCTTCTTCCTCTTCAATGCCCCAATCCGC
GTTATTCACGACATTCTCCACTTCCAGTTCAGGGAAACAGTCTCCAAAGG
AAACCCAATCATCAGATGAACCCAACAGCGATAATTTTGCAGACTTCCCC
GAACCCTCATTCATACCCAAACCTTTGAAGAGGACACTCATGGATGCAGC
GCCACTGAAGGAACGACAAACAAAGAAGCAGAAGCGGAAGGAACCTAGTT
CTATGCGCTTACCGGAACCTCATGAAATGCCTCCGATAGAAGACGATGGT
ACAAAGCCGCCTTATAGCTATGCAACGCTGATTGGCATGTCTATACTTCG
TGCGCCAAACAGGCGATTGACATTAGCGCAAATATACAAGTGGATCTCGG
ATACGTTTTCGTATTACAAGAATAGTGACCCAGGCTGGCAGAACAGCATT
CGGCACAATCTCAGCCTGAATAAAGCATTTATCAAGCAAGAAAGGCCTAA
GGATGATCCAGGGAAAGGCAACTACTGGGCTATTGAGCCTGGAATGGAAG
CTCAATTCCTTAAAGACAAGCCACTACGCCGCGCAACCATGTCCAGCCTT
CCTCTTCCGGCAGCGCCTCAGAAGGACACAGCGCGTCCGCATACTTCAAG
TACTACTACATGGGCAATCCCGCCCCCACCATACCAACCGACAGGAAAAC
ATTCGAAGCCTGTGGATCTATCTTCTGATGCCACGCTCCCTGCTTCTGAT
CCTGCTCTTCAAGAAGACACGAGTGACGAACATACCAACCGTACTGTGCA
GACTCTTGGTCCTCGGTCATCACCGCTCCAAACCATACATTCGTCACCTC
CTGTTGTGCCCCCTCGTTACACTCGACAAGGGACCCCTCCAACGCCATCT
CAAACCATCACTTCAGGAATCGTTTCCATCACCACTAAAAGGAAACAAAA
CGCAGTGAATGACAGTGGATACTTCTCGTCGCTAGAGTCCTCAGCTATGC
GACCAAGCAAAGCTGGGCATATTCTAACTTCGGATTTAGACATAGACCCG
CCACGAATTAAGCGTGGTCGGGCAGAGGAAGAGATAGCTCGAATTCGAAG
TTCTTCCCACGATATTAGCCCAAGTCAGTGTGGCATCTTGAAGGACTCAG
GATTAGTTGTTGGTTCATCGCCCCTCCGTGGGGAATATATCAGCATGCTA
CCCCCTCCTATCACGCCTGTCATCAAATTCAAGAAACCCGCTAAACCACC
ACCTTCAGTATCACCAAACACGAATCTCAGGAACCATCGTAAGAAGATCC
AACACATGGTCAATTCCCCGATAAAGCATTTGGGCCTCAACGATGAAGAT
CTTCCTTGGAGCCCGGCTTTCAATATCCAAGACGAGACGTTCACGCCGAG
TGAAAATCTCCATACTGGCTTCGATGTCTTTGCGGATCCTGTTCCGGATA
ATATATCAACCCCAGCATACGGCTCGCCAGAGAAGCGGTCTGCAAAGCGT
ACTCGAACAGACGCTGGCGGATCAAATGGCAATATACTGGCAGATATCAC
ATCATTGAATTCCAACAACAGGCTGGGGGTGCAACCGTTGCAATCATCGA
CCAAAGCTAAAAGCCTTCTTTTCCCCGAGTCGCCTTCCAAAGTAACTGAC
TCTGCACGTTATCTGGACTCTTCACATGAGGATTTCTTCTCGTTTCATCT
TTTTGATGAAAGCCCGGCGGAAATCGATGGCGTGGATATTTTGCAGGGGT
TCCAGAAGATCGGAGGTATGAACAAGGAAGAACCGTCAAGAGCGAAATCA
TACCCACCGAGGCCTTCGTGCAGTCATCGAAGCAACACACCTCTGTTCTA
A
back to top

Coding sequence (CDS) from alignment at OGUI01000010.1:882950..885100-

>ATCC64974_65930-T1 ID=ATCC64974_65930-T1|Name=ATCC64974_65930-T1|organism=Aspergillus niger N402|type=CDS|length=2151bp|location=Sequence derived from alignment at OGUI01000010.1:882950..885100- (Aspergillus niger N402)
ATGAGCCCGACACGTTCTGCGCCGCTAACCTCACGGCCTACATCTTGTGG
AAAAGCGGTTCCCAAGCCACGACCCCGCTTAGAGCCCTCACCTTTACCTC
TGCAGCCTGTTGAGCATGTGCCGTCGACACAAGGTCAATTCTTAAATGCG
ACCGCTTCTACGACGCACAACGTTTCGCCGGCAAAAGCCGTTCGCGGCTC
AAGTAGCCTGTTTTCTGGACATGGAAATCTAGGATATGTTTCCATCACAG
CGCCCCCCGCTCCAGAATTTATAACAGATTCTCCTTCCAAACACCCCTCC
TTCGGATATCACCACACCGCTGCTTCTTCCTCTTCAATGCCCCAATCCGC
GTTATTCACGACATTCTCCACTTCCAGTTCAGGGAAACAGTCTCCAAAGG
AAACCCAATCATCAGATGAACCCAACAGCGATAATTTTGCAGACTTCCCC
GAACCCTCATTCATACCCAAACCTTTGAAGAGGACACTCATGGATGCAGC
GCCACTGAAGGAACGACAAACAAAGAAGCAGAAGCGGAAGGAACCTAGTT
CTATGCGCTTACCGGAACCTCATGAAATGCCTCCGATAGAAGACGATGGT
ACAAAGCCGCCTTATAGCTATGCAACGCTGATTGGCATGTCTATACTTCG
TGCGCCAAACAGGCGATTGACATTAGCGCAAATATACAAGTGGATCTCGG
ATACGTTTTCGTATTACAAGAATAGTGACCCAGGCTGGCAGAACAGCATT
CGGCACAATCTCAGCCTGAATAAAGCATTTATCAAGCAAGAAAGGCCTAA
GGATGATCCAGGGAAAGGCAACTACTGGGCTATTGAGCCTGGAATGGAAG
CTCAATTCCTTAAAGACAAGCCACTACGCCGCGCAACCATGTCCAGCCTT
CCTCTTCCGGCAGCGCCTCAGAAGGACACAGCGCGTCCGCATACTTCAAG
TACTACTACATGGGCAATCCCGCCCCCACCATACCAACCGACAGGAAAAC
ATTCGAAGCCTGTGGATCTATCTTCTGATGCCACGCTCCCTGCTTCTGAT
CCTGCTCTTCAAGAAGACACGAGTGACGAACATACCAACCGTACTGTGCA
GACTCTTGGTCCTCGGTCATCACCGCTCCAAACCATACATTCGTCACCTC
CTGTTGTGCCCCCTCGTTACACTCGACAAGGGACCCCTCCAACGCCATCT
CAAACCATCACTTCAGGAATCGTTTCCATCACCACTAAAAGGAAACAAAA
CGCAGTGAATGACAGTGGATACTTCTCGTCGCTAGAGTCCTCAGCTATGC
GACCAAGCAAAGCTGGGCATATTCTAACTTCGGATTTAGACATAGACCCG
CCACGAATTAAGCGTGGTCGGGCAGAGGAAGAGATAGCTCGAATTCGAAG
TTCTTCCCACGATATTAGCCCAAGTCAGTGTGGCATCTTGAAGGACTCAG
GATTAGTTGTTGGTTCATCGCCCCTCCGTGGGGAATATATCAGCATGCTA
CCCCCTCCTATCACGCCTGTCATCAAATTCAAGAAACCCGCTAAACCACC
ACCTTCAGTATCACCAAACACGAATCTCAGGAACCATCGTAAGAAGATCC
AACACATGGTCAATTCCCCGATAAAGCATTTGGGCCTCAACGATGAAGAT
CTTCCTTGGAGCCCGGCTTTCAATATCCAAGACGAGACGTTCACGCCGAG
TGAAAATCTCCATACTGGCTTCGATGTCTTTGCGGATCCTGTTCCGGATA
ATATATCAACCCCAGCATACGGCTCGCCAGAGAAGCGGTCTGCAAAGCGT
ACTCGAACAGACGCTGGCGGATCAAATGGCAATATACTGGCAGATATCAC
ATCATTGAATTCCAACAACAGGCTGGGGGTGCAACCGTTGCAATCATCGA
CCAAAGCTAAAAGCCTTCTTTTCCCCGAGTCGCCTTCCAAAGTAACTGAC
TCTGCACGTTATCTGGACTCTTCACATGAGGATTTCTTCTCGTTTCATCT
TTTTGATGAAAGCCCGGCGGAAATCGATGGCGTGGATATTTTGCAGGGGT
TCCAGAAGATCGGAGGTATGAACAAGGAAGAACCGTCAAGAGCGAAATCA
TACCCACCGAGGCCTTCGTGCAGTCATCGAAGCAACACACCTCTGTTCTA
A
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003700DNA-binding transcription factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_65930ATCC64974_65930Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_65930-T1.cdsATCC64974_65930-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_65930-T1.exon1ATCC64974_65930-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_65930-T1ATCC64974_65930-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR030456
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR001766
DBxrefPFAM:PF00250
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:882950..885100 -
Powered by Drupal