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ATCC64974_66040-T1, ATCC64974_66040-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_66040-T1
Unique NameATCC64974_66040-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:917523..918268-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_66040-T1 ID=ATCC64974_66040-T1|Name=ATCC64974_66040-T1|organism=Aspergillus niger N402|type=mRNA|length=746bp|location=Sequence derived from alignment at OGUI01000010.1:917523..918268- (Aspergillus niger N402)
ATGCCTAGTGCACCGAAGCAGCGCAAAATAGCTATTGTTGGCAGTCGCTC
TGTGGGTATGGCCTCCTATCTCTATGAAAAGCCTTGCTTGTTTGGTTTAC
TCATACTCACTAAATCTTTTCCAGGTAAATCTTCTCTTACAGTTCGATTT
GTTGAACATCATTTTGTAGAAAGCTACTATCCAACGATCGAAAACACTTT
CAGTCGAATCATCAAATACAACGGCCAAGATTATGCCACTGAAATCGTTG
ACACAGCTGGTCAGGTATGGAGAAAATCTGACCCTGATCCTAGAGTTTCC
GGTATATGGCTAATACTGCTGTAGGACGAGTACAGTATATTGAACTCCAA
GCATTTCATCGGAATACATGGGTATATTATTGTCTACTCGGTGGCTTCAC
GCCAGTCGTTCGACATGGTGAGGGTCATACGTGACAAGATTCTGAACCAT
CTTGTGAGTATCTCATTTGTACCTTGCAGCCACCATAGTCGCTGACATGA
AATAAGGGTGCCGATCATGTACCCCTTGTGCTTGTCGGAAATAAAAGCGA
TCTCAAATCTGAGCAACGCCAGGTGTCTCTAGATGAAGGCCGGCAGCTTT
GTGAAGAATTCCATTGTGCATTTACTGAGGCTAGTGCTCGTCTCGACTAT
AATGTTGCGAAAGCGTTTGACTTAATGATCGGGGAAATCGAAAAGTCGCA
AAACCCATCACAGCCGGCAGGAGGCAACAAATGCGCTGTAATGTGA
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Coding sequence (CDS) from alignment at OGUI01000010.1:917523..918268-

>ATCC64974_66040-T1 ID=ATCC64974_66040-T1|Name=ATCC64974_66040-T1|organism=Aspergillus niger N402|type=CDS|length=2256bp|location=Sequence derived from alignment at OGUI01000010.1:917523..918268- (Aspergillus niger N402)
GGTGCCGATCATGTACCCCTTGTGCTTGTCGGAAATAAAAGCGATCTCAA
ATCTGAGCAACGCCAGGTGTCTCTAGATGAAGGCCGGCAGCTTTGTGAAG
AATTCCATTGTGCATTTACTGAGGCTAGTGCTCGTCTCGACTATAATGTT
GCGAAAGCGTTTGACTTAATGATCGGGGAAATCGAAAAGTCGCAAAACCC
ATCACAGCCGGCAGGAGGCAACAAATGCGCTGTAATGTGAGACGAGTACA
GTATATTGAACTCCAAGCATTTCATCGGAATACATGGGTATATTATTGTC
TACTCGGTGGCTTCACGCCAGTCGTTCGACATGGTGAGGGTCATACGTGA
CAAGATTCTGAACCATCTTGTAAATCTTCTCTTACAGTTCGATTTGTTGA
ACATCATTTTGTAGAAAGCTACTATCCAACGATCGAAAACACTTTCAGTC
GAATCATCAAATACAACGGCCAAGATTATGCCACTGAAATCGTTGACACA
GCTGGTCAGATGCCTAGTGCACCGAAGCAGCGCAAAATAGCTATTGTTGG
CAGTCGCTCTGTGGGGTGCCGATCATGTACCCCTTGTGCTTGTCGGAAAT
AAAAGCGATCTCAAATCTGAGCAACGCCAGGTGTCTCTAGATGAAGGCCG
GCAGCTTTGTGAAGAATTCCATTGTGCATTTACTGAGGCTAGTGCTCGTC
TCGACTATAATGTTGCGAAAGCGTTTGACTTAATGATCGGGGAAATCGAA
AAGTCGCAAAACCCATCACAGCCGGCAGGAGGCAACAAATGCGCTGTAAT
GTGAGACGAGTACAGTATATTGAACTCCAAGCATTTCATCGGAATACATG
GGTATATTATTGTCTACTCGGTGGCTTCACGCCAGTCGTTCGACATGGTG
AGGGTCATACGTGACAAGATTCTGAACCATCTTGTAAATCTTCTCTTACA
GTTCGATTTGTTGAACATCATTTTGTAGAAAGCTACTATCCAACGATCGA
AAACACTTTCAGTCGAATCATCAAATACAACGGCCAAGATTATGCCACTG
AAATCGTTGACACAGCTGGTCAGATGCCTAGTGCACCGAAGCAGCGCAAA
ATAGCTATTGTTGGCAGTCGCTCTGTGGGGTGCCGATCATGTACCCCTTG
TGCTTGTCGGAAATAAAAGCGATCTCAAATCTGAGCAACGCCAGGTGTCT
CTAGATGAAGGCCGGCAGCTTTGTGAAGAATTCCATTGTGCATTTACTGA
GGCTAGTGCTCGTCTCGACTATAATGTTGCGAAAGCGTTTGACTTAATGA
TCGGGGAAATCGAAAAGTCGCAAAACCCATCACAGCCGGCAGGAGGCAAC
AAATGCGCTGTAATGTGAGACGAGTACAGTATATTGAACTCCAAGCATTT
CATCGGAATACATGGGTATATTATTGTCTACTCGGTGGCTTCACGCCAGT
CGTTCGACATGGTGAGGGTCATACGTGACAAGATTCTGAACCATCTTGTA
AATCTTCTCTTACAGTTCGATTTGTTGAACATCATTTTGTAGAAAGCTAC
TATCCAACGATCGAAAACACTTTCAGTCGAATCATCAAATACAACGGCCA
AGATTATGCCACTGAAATCGTTGACACAGCTGGTCAGATGCCTAGTGCAC
CGAAGCAGCGCAAAATAGCTATTGTTGGCAGTCGCTCTGTGGGGTGCCGA
TCATGTACCCCTTGTGCTTGTCGGAAATAAAAGCGATCTCAAATCTGAGC
AACGCCAGGTGTCTCTAGATGAAGGCCGGCAGCTTTGTGAAGAATTCCAT
TGTGCATTTACTGAGGCTAGTGCTCGTCTCGACTATAATGTTGCGAAAGC
GTTTGACTTAATGATCGGGGAAATCGAAAAGTCGCAAAACCCATCACAGC
CGGCAGGAGGCAACAAATGCGCTGTAATGTGAGACGAGTACAGTATATTG
AACTCCAAGCATTTCATCGGAATACATGGGTATATTATTGTCTACTCGGT
GGCTTCACGCCAGTCGTTCGACATGGTGAGGGTCATACGTGACAAGATTC
TGAACCATCTTGTAAATCTTCTCTTACAGTTCGATTTGTTGAACATCATT
TTGTAGAAAGCTACTATCCAACGATCGAAAACACTTTCAGTCGAATCATC
AAATACAACGGCCAAGATTATGCCACTGAAATCGTTGACACAGCTGGTCA
GATGCCTAGTGCACCGAAGCAGCGCAAAATAGCTATTGTTGGCAGTCGCT
CTGTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RHB1ATCC64974_66040Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66040-T1ATCC64974_66040-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66040-T1.cdsATCC64974_66040-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66040-T1.exon4ATCC64974_66040-T1.exon4Aspergillus niger N402exon
ATCC64974_66040-T1.exon3ATCC64974_66040-T1.exon3Aspergillus niger N402exon
ATCC64974_66040-T1.exon2ATCC64974_66040-T1.exon2Aspergillus niger N402exon
ATCC64974_66040-T1.exon1ATCC64974_66040-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR020849
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF00025
ProductGTP-binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:917523..918268 -
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