You are here

Home

ATCC64974_66560-T1, ATCC64974_66560-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_66560-T1
Unique NameATCC64974_66560-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:1171983..1173413-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_66560-T1 ID=ATCC64974_66560-T1|Name=ATCC64974_66560-T1|organism=Aspergillus niger N402|type=mRNA|length=1431bp|location=Sequence derived from alignment at OGUI01000010.1:1171983..1173413- (Aspergillus niger N402)
ATGGTTGCTCTCCCCACTCAGAACGGAGCGTCGACCCCTCAGGATCGCCG
CTTCGGAACTTTGGCCGTCCACGCCGGTGCTCCTCATGATCCTACCACCG
GCGCTGTCATTGCTCCTGTGAGTTCGCACTCTTCTCCGGACACTGCCTTC
ACTTCTACTGTACACGCGCTAATCAGCTGGTGATAGATCTCCCTCTCCAC
CACCTTTGCGCAAACCAGCGTCGGCAACCCCGTCGGTCTCTACGAATACA
CCCGCAGCTCGAACCCCAACCGGTTAGTGGGATTGGAATCGCCATAGTTG
AAAATACATTATATGGGTTATTGACTTGCTGGAATCCAGTGACAACTTCG
AGCAGGCCATTGCCGCTCTTGAACACGCCAAATATGCCCTTGCCTTCTCC
TCTGGCTCCGCAACCACCGCCGTCATCCTTCAGTCTCTCGCCGCGGGCTC
TCACATCGTCTCCGTCTCCGATGTCTATGGTGGAACCCACCGGTACTTCA
CCAAGGTTGCCTCCGCCCATGGTGTCCAGGTGACTTTCTCGCCTTGCATC
GAACTCGACGTCGAGGAGCTCATCCGCCCCAACGAGACCAAGCTGGTCTG
GATCGAAACCCCCTCCAACCCCACCCTCGGCCTGGTCGATATCGAGAAGA
TCGCTGCCGTGGCCCACAAGTACGGTATCCTGGTTGTCGTCGATAACACC
TTCCTGAGCCCCTACGTTCAGAACCCTCTGGACCACGGTGCCGATATCGT
CGTCCACTCCGTCACTAAGTACATCAACGGTCACTCTGTAAGCTCGGCTC
TTACATCTTTCTATCCTGGCAACGGAAGTCTTGCTAATAAGAATAATCTC
AGGATGTCCTGATGGGTGTTGCCGCCTTCAACTCCGACAGCCTGCAGGAG
CGCCTTTCTTTCCTCCAGAACGCCATCGGCGCCGTCCCCTCCCCCTTCGA
CTGCTGGCTCGCCCACCGTGGTCTTAAGACCCTCCACCTGCGTGCGCGCG
AGGCCACCACCAACGCCACCGCCGTTGCCAAGGCCCTCGAGGCTTCCCCC
AACGTCATCGCCGTCAACTACCCCGGCATTGACTCTCACCCCAACCGCGC
CATTGCCGTCAAGCAGCACCGCAACGGCATGGGCGGTGGTATGCTGAGCT
TCCGTATCAAGGGCGGTCAGGAAGCCGCTCACCTCTTCTGCAAGTACACT
AAGATCTTCACTCTGGCTGAGAGTCTGGGTGGTGTCGAGTCTCTCTGCGA
GGTGCCTTCCAGCATGACCCACGCCGGTATCCCCAAGGACCAGCGCGAGG
CTGCTGGTGTCTTCGATGACCTTGTCCGTATGTCCTGCGGTGTTGAGGAT
TCCGAGGACCTCTTGGCCGACGCCCTTCAGGCTCTTGAGAAGGCTGTGGC
TGCGACTCAGGTCGAGAATGGATCTGCTTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000010.1:1171983..1173413-

>ATCC64974_66560-T1 ID=ATCC64974_66560-T1|Name=ATCC64974_66560-T1|organism=Aspergillus niger N402|type=CDS|length=4920bp|location=Sequence derived from alignment at OGUI01000010.1:1171983..1173413- (Aspergillus niger N402)
GATGTCCTGATGGGTGTTGCCGCCTTCAACTCCGACAGCCTGCAGGAGCG
CCTTTCTTTCCTCCAGAACGCCATCGGCGCCGTCCCCTCCCCCTTCGACT
GCTGGCTCGCCCACCGTGGTCTTAAGACCCTCCACCTGCGTGCGCGCGAG
GCCACCACCAACGCCACCGCCGTTGCCAAGGCCCTCGAGGCTTCCCCCAA
CGTCATCGCCGTCAACTACCCCGGCATTGACTCTCACCCCAACCGCGCCA
TTGCCGTCAAGCAGCACCGCAACGGCATGGGCGGTGGTATGCTGAGCTTC
CGTATCAAGGGCGGTCAGGAAGCCGCTCACCTCTTCTGCAAGTACACTAA
GATCTTCACTCTGGCTGAGAGTCTGGGTGGTGTCGAGTCTCTCTGCGAGG
TGCCTTCCAGCATGACCCACGCCGGTATCCCCAAGGACCAGCGCGAGGCT
GCTGGTGTCTTCGATGACCTTGTCCGTATGTCCTGCGGTGTTGAGGATTC
CGAGGACCTCTTGGCCGACGCCCTTCAGGCTCTTGAGAAGGCTGTGGCTG
CGACTCAGGTCGAGAATGGATCTGCTTAGTGACAACTTCGAGCAGGCCAT
TGCCGCTCTTGAACACGCCAAATATGCCCTTGCCTTCTCCTCTGGCTCCG
CAACCACCGCCGTCATCCTTCAGTCTCTCGCCGCGGGCTCTCACATCGTC
TCCGTCTCCGATGTCTATGGTGGAACCCACCGGTACTTCACCAAGGTTGC
CTCCGCCCATGGTGTCCAGGTGACTTTCTCGCCTTGCATCGAACTCGACG
TCGAGGAGCTCATCCGCCCCAACGAGACCAAGCTGGTCTGGATCGAAACC
CCCTCCAACCCCACCCTCGGCCTGGTCGATATCGAGAAGATCGCTGCCGT
GGCCCACAAGTACGGTATCCTGGTTGTCGTCGATAACACCTTCCTGAGCC
CCTACGTTCAGAACCCTCTGGACCACGGTGCCGATATCGTCGTCCACTCC
GTCACTAAGTACATCAACGGTCACTCTATCTCCCTCTCCACCACCTTTGC
GCAAACCAGCGTCGGCAACCCCGTCGGTCTCTACGAATACACCCGCAGCT
CGAACCCCAACCGATGGTTGCTCTCCCCACTCAGAACGGAGCGTCGACCC
CTCAGGATCGCCGCTTCGGAACTTTGGCCGTCCACGCCGGTGCTCCTCAT
GATCCTACCACCGGCGCTGTCATTGCTCCTGATGTCCTGATGGGTGTTGC
CGCCTTCAACTCCGACAGCCTGCAGGAGCGCCTTTCTTTCCTCCAGAACG
CCATCGGCGCCGTCCCCTCCCCCTTCGACTGCTGGCTCGCCCACCGTGGT
CTTAAGACCCTCCACCTGCGTGCGCGCGAGGCCACCACCAACGCCACCGC
CGTTGCCAAGGCCCTCGAGGCTTCCCCCAACGTCATCGCCGTCAACTACC
CCGGCATTGACTCTCACCCCAACCGCGCCATTGCCGTCAAGCAGCACCGC
AACGGCATGGGCGGTGGTATGCTGAGCTTCCGTATCAAGGGCGGTCAGGA
AGCCGCTCACCTCTTCTGCAAGTACACTAAGATCTTCACTCTGGCTGAGA
GTCTGGGTGGTGTCGAGTCTCTCTGCGAGGTGCCTTCCAGCATGACCCAC
GCCGGTATCCCCAAGGACCAGCGCGAGGCTGCTGGTGTCTTCGATGACCT
TGTCCGTATGTCCTGCGGTGTTGAGGATTCCGAGGACCTCTTGGCCGACG
CCCTTCAGGCTCTTGAGAAGGCTGTGGCTGCGACTCAGGTCGAGAATGGA
TCTGCTTAGTGACAACTTCGAGCAGGCCATTGCCGCTCTTGAACACGCCA
AATATGCCCTTGCCTTCTCCTCTGGCTCCGCAACCACCGCCGTCATCCTT
CAGTCTCTCGCCGCGGGCTCTCACATCGTCTCCGTCTCCGATGTCTATGG
TGGAACCCACCGGTACTTCACCAAGGTTGCCTCCGCCCATGGTGTCCAGG
TGACTTTCTCGCCTTGCATCGAACTCGACGTCGAGGAGCTCATCCGCCCC
AACGAGACCAAGCTGGTCTGGATCGAAACCCCCTCCAACCCCACCCTCGG
CCTGGTCGATATCGAGAAGATCGCTGCCGTGGCCCACAAGTACGGTATCC
TGGTTGTCGTCGATAACACCTTCCTGAGCCCCTACGTTCAGAACCCTCTG
GACCACGGTGCCGATATCGTCGTCCACTCCGTCACTAAGTACATCAACGG
TCACTCTATCTCCCTCTCCACCACCTTTGCGCAAACCAGCGTCGGCAACC
CCGTCGGTCTCTACGAATACACCCGCAGCTCGAACCCCAACCGATGGTTG
CTCTCCCCACTCAGAACGGAGCGTCGACCCCTCAGGATCGCCGCTTCGGA
ACTTTGGCCGTCCACGCCGGTGCTCCTCATGATCCTACCACCGGCGCTGT
CATTGCTCCTGATGTCCTGATGGGTGTTGCCGCCTTCAACTCCGACAGCC
TGCAGGAGCGCCTTTCTTTCCTCCAGAACGCCATCGGCGCCGTCCCCTCC
CCCTTCGACTGCTGGCTCGCCCACCGTGGTCTTAAGACCCTCCACCTGCG
TGCGCGCGAGGCCACCACCAACGCCACCGCCGTTGCCAAGGCCCTCGAGG
CTTCCCCCAACGTCATCGCCGTCAACTACCCCGGCATTGACTCTCACCCC
AACCGCGCCATTGCCGTCAAGCAGCACCGCAACGGCATGGGCGGTGGTAT
GCTGAGCTTCCGTATCAAGGGCGGTCAGGAAGCCGCTCACCTCTTCTGCA
AGTACACTAAGATCTTCACTCTGGCTGAGAGTCTGGGTGGTGTCGAGTCT
CTCTGCGAGGTGCCTTCCAGCATGACCCACGCCGGTATCCCCAAGGACCA
GCGCGAGGCTGCTGGTGTCTTCGATGACCTTGTCCGTATGTCCTGCGGTG
TTGAGGATTCCGAGGACCTCTTGGCCGACGCCCTTCAGGCTCTTGAGAAG
GCTGTGGCTGCGACTCAGGTCGAGAATGGATCTGCTTAGTGACAACTTCG
AGCAGGCCATTGCCGCTCTTGAACACGCCAAATATGCCCTTGCCTTCTCC
TCTGGCTCCGCAACCACCGCCGTCATCCTTCAGTCTCTCGCCGCGGGCTC
TCACATCGTCTCCGTCTCCGATGTCTATGGTGGAACCCACCGGTACTTCA
CCAAGGTTGCCTCCGCCCATGGTGTCCAGGTGACTTTCTCGCCTTGCATC
GAACTCGACGTCGAGGAGCTCATCCGCCCCAACGAGACCAAGCTGGTCTG
GATCGAAACCCCCTCCAACCCCACCCTCGGCCTGGTCGATATCGAGAAGA
TCGCTGCCGTGGCCCACAAGTACGGTATCCTGGTTGTCGTCGATAACACC
TTCCTGAGCCCCTACGTTCAGAACCCTCTGGACCACGGTGCCGATATCGT
CGTCCACTCCGTCACTAAGTACATCAACGGTCACTCTATCTCCCTCTCCA
CCACCTTTGCGCAAACCAGCGTCGGCAACCCCGTCGGTCTCTACGAATAC
ACCCGCAGCTCGAACCCCAACCGATGGTTGCTCTCCCCACTCAGAACGGA
GCGTCGACCCCTCAGGATCGCCGCTTCGGAACTTTGGCCGTCCACGCCGG
TGCTCCTCATGATCCTACCACCGGCGCTGTCATTGCTCCTGATGTCCTGA
TGGGTGTTGCCGCCTTCAACTCCGACAGCCTGCAGGAGCGCCTTTCTTTC
CTCCAGAACGCCATCGGCGCCGTCCCCTCCCCCTTCGACTGCTGGCTCGC
CCACCGTGGTCTTAAGACCCTCCACCTGCGTGCGCGCGAGGCCACCACCA
ACGCCACCGCCGTTGCCAAGGCCCTCGAGGCTTCCCCCAACGTCATCGCC
GTCAACTACCCCGGCATTGACTCTCACCCCAACCGCGCCATTGCCGTCAA
GCAGCACCGCAACGGCATGGGCGGTGGTATGCTGAGCTTCCGTATCAAGG
GCGGTCAGGAAGCCGCTCACCTCTTCTGCAAGTACACTAAGATCTTCACT
CTGGCTGAGAGTCTGGGTGGTGTCGAGTCTCTCTGCGAGGTGCCTTCCAG
CATGACCCACGCCGGTATCCCCAAGGACCAGCGCGAGGCTGCTGGTGTCT
TCGATGACCTTGTCCGTATGTCCTGCGGTGTTGAGGATTCCGAGGACCTC
TTGGCCGACGCCCTTCAGGCTCTTGAGAAGGCTGTGGCTGCGACTCAGGT
CGAGAATGGATCTGCTTAGTGACAACTTCGAGCAGGCCATTGCCGCTCTT
GAACACGCCAAATATGCCCTTGCCTTCTCCTCTGGCTCCGCAACCACCGC
CGTCATCCTTCAGTCTCTCGCCGCGGGCTCTCACATCGTCTCCGTCTCCG
ATGTCTATGGTGGAACCCACCGGTACTTCACCAAGGTTGCCTCCGCCCAT
GGTGTCCAGGTGACTTTCTCGCCTTGCATCGAACTCGACGTCGAGGAGCT
CATCCGCCCCAACGAGACCAAGCTGGTCTGGATCGAAACCCCCTCCAACC
CCACCCTCGGCCTGGTCGATATCGAGAAGATCGCTGCCGTGGCCCACAAG
TACGGTATCCTGGTTGTCGTCGATAACACCTTCCTGAGCCCCTACGTTCA
GAACCCTCTGGACCACGGTGCCGATATCGTCGTCCACTCCGTCACTAAGT
ACATCAACGGTCACTCTATCTCCCTCTCCACCACCTTTGCGCAAACCAGC
GTCGGCAACCCCGTCGGTCTCTACGAATACACCCGCAGCTCGAACCCCAA
CCGATGGTTGCTCTCCCCACTCAGAACGGAGCGTCGACCCCTCAGGATCG
CCGCTTCGGAACTTTGGCCGTCCACGCCGGTGCTCCTCATGATCCTACCA
CCGGCGCTGTCATTGCTCCT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019346transsulfuration
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CYS3ATCC64974_66560Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66560-T1ATCC64974_66560-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66560-T1.cdsATCC64974_66560-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66560-T1.exon4ATCC64974_66560-T1.exon4Aspergillus niger N402exon
ATCC64974_66560-T1.exon3ATCC64974_66560-T1.exon3Aspergillus niger N402exon
ATCC64974_66560-T1.exon2ATCC64974_66560-T1.exon2Aspergillus niger N402exon
ATCC64974_66560-T1.exon1ATCC64974_66560-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR000277
DBxrefInterPro:IPR015422
DBxrefInterPro:IPR015421
DBxrefPFAM:PF01053
Productcystathionine gamma-lyase cys3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:1171983..1173413 -
Powered by Drupal