You are here

Home

ATCC64974_69120-T1, ATCC64974_69120-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_69120-T1
Unique NameATCC64974_69120-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:2026046..2026972-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_69120-T1 ID=ATCC64974_69120-T1|Name=ATCC64974_69120-T1|organism=Aspergillus niger N402|type=mRNA|length=927bp|location=Sequence derived from alignment at OGUI01000010.1:2026046..2026972- (Aspergillus niger N402)
ATGTCTGAACGCTCCACCGTCCACGTCGAGGGCATTGCCTCCGCTACCAC
CGACAAGGAGGTCCAAGATTTCTTTAGCTTCTGGTATGCAATGCACGCAT
TTCAAACCATCCCTTGCATGAACTGCACGGCTGACAAGCTTACAGCGGAA
AGATCACCCACATTTCCGTGACCCCCGTTTCAGGCGAAGCTGATGCCCAA
AAGTCGGCCACTGTTACTTTCGAAAAGGAAGCGTAAGTTACCCCGCACCT
TACCCGTCATTGTTGCCAAATGACACCATCTCGCCCACTCTCCATCAAAG
CTAACCATGATTCTCTGCGATAGTGCTGCTAAGACCGCTCTTCTCCTCGA
CAACACCCAGCTTGGTTCCTCTCTCGTGCACGTCAAGGCTGCCCAGAGCC
TCGACGACATCGCCGGCGAGCAGGCCGCCAGCGCCGGACAAGCCAAGGAC
GAGTACAACCACGACCTCGAGCAGGAGGACAAGCCCCGTTCTCGCATTGT
AGCTGAGTACCTGGCCCACGGCTACACCCTCAGCGACAATGCCATCCAGA
AGGCCATTGCCCTGGACAACAAGCACGGGTTCTCGTCGCGCTTCACCAGC
GCTCTGTCTTCCTTCGACCAGAAGTACCATGCCACGGACCGTGCTCGCGG
TCTGGACGAGAACTACAAGCTCAGCGACAAGGCGACCACTGGCTGGCGTA
GTCTGAACCACTACTTCGAGAAGGCTCTCGACACTCCCTCGGGCAGGAAG
TTGCGGGACTTTTACTCCCAGACCGATAAGCAGGTGCGCGATATTCACAA
CGAGGCTCGCAGACTTGCGGATCTGAAGAGCGGCAAGTCTACTACTGAGG
GTGGTGAGGCTCCTGCTCCTAGCACGGCGCCTGCTACTCAGCCGGCGGGT
ACTGCTGCTCCTGCTGAGCAGGCGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000010.1:2026046..2026972-

>ATCC64974_69120-T1 ID=ATCC64974_69120-T1|Name=ATCC64974_69120-T1|organism=Aspergillus niger N402|type=CDS|length=2322bp|location=Sequence derived from alignment at OGUI01000010.1:2026046..2026972- (Aspergillus niger N402)
TGCTGCTAAGACCGCTCTTCTCCTCGACAACACCCAGCTTGGTTCCTCTC
TCGTGCACGTCAAGGCTGCCCAGAGCCTCGACGACATCGCCGGCGAGCAG
GCCGCCAGCGCCGGACAAGCCAAGGACGAGTACAACCACGACCTCGAGCA
GGAGGACAAGCCCCGTTCTCGCATTGTAGCTGAGTACCTGGCCCACGGCT
ACACCCTCAGCGACAATGCCATCCAGAAGGCCATTGCCCTGGACAACAAG
CACGGGTTCTCGTCGCGCTTCACCAGCGCTCTGTCTTCCTTCGACCAGAA
GTACCATGCCACGGACCGTGCTCGCGGTCTGGACGAGAACTACAAGCTCA
GCGACAAGGCGACCACTGGCTGGCGTAGTCTGAACCACTACTTCGAGAAG
GCTCTCGACACTCCCTCGGGCAGGAAGTTGCGGGACTTTTACTCCCAGAC
CGATAAGCAGGTGCGCGATATTCACAACGAGGCTCGCAGACTTGCGGATC
TGAAGAGCGGCAAGTCTACTACTGAGGGTGGTGAGGCTCCTGCTCCTAGC
ACGGCGCCTGCTACTCAGCCGGCGGGTACTGCTGCTCCTGCTGAGCAGGC
GTAACGGAAAGATCACCCACATTTCCGTGACCCCCGTTTCAGGCGAAGCT
GATGCCCAAAAGTCGGCCACTGTTACTTTCGAAAAGGAAGCATGTCTGAA
CGCTCCACCGTCCACGTCGAGGGCATTGCCTCCGCTACCACCGACAAGGA
GGTCCAAGATTTCTTTAGCTTCTGTGCTGCTAAGACCGCTCTTCTCCTCG
ACAACACCCAGCTTGGTTCCTCTCTCGTGCACGTCAAGGCTGCCCAGAGC
CTCGACGACATCGCCGGCGAGCAGGCCGCCAGCGCCGGACAAGCCAAGGA
CGAGTACAACCACGACCTCGAGCAGGAGGACAAGCCCCGTTCTCGCATTG
TAGCTGAGTACCTGGCCCACGGCTACACCCTCAGCGACAATGCCATCCAG
AAGGCCATTGCCCTGGACAACAAGCACGGGTTCTCGTCGCGCTTCACCAG
CGCTCTGTCTTCCTTCGACCAGAAGTACCATGCCACGGACCGTGCTCGCG
GTCTGGACGAGAACTACAAGCTCAGCGACAAGGCGACCACTGGCTGGCGT
AGTCTGAACCACTACTTCGAGAAGGCTCTCGACACTCCCTCGGGCAGGAA
GTTGCGGGACTTTTACTCCCAGACCGATAAGCAGGTGCGCGATATTCACA
ACGAGGCTCGCAGACTTGCGGATCTGAAGAGCGGCAAGTCTACTACTGAG
GGTGGTGAGGCTCCTGCTCCTAGCACGGCGCCTGCTACTCAGCCGGCGGG
TACTGCTGCTCCTGCTGAGCAGGCGTAACGGAAAGATCACCCACATTTCC
GTGACCCCCGTTTCAGGCGAAGCTGATGCCCAAAAGTCGGCCACTGTTAC
TTTCGAAAAGGAAGCATGTCTGAACGCTCCACCGTCCACGTCGAGGGCAT
TGCCTCCGCTACCACCGACAAGGAGGTCCAAGATTTCTTTAGCTTCTGTG
CTGCTAAGACCGCTCTTCTCCTCGACAACACCCAGCTTGGTTCCTCTCTC
GTGCACGTCAAGGCTGCCCAGAGCCTCGACGACATCGCCGGCGAGCAGGC
CGCCAGCGCCGGACAAGCCAAGGACGAGTACAACCACGACCTCGAGCAGG
AGGACAAGCCCCGTTCTCGCATTGTAGCTGAGTACCTGGCCCACGGCTAC
ACCCTCAGCGACAATGCCATCCAGAAGGCCATTGCCCTGGACAACAAGCA
CGGGTTCTCGTCGCGCTTCACCAGCGCTCTGTCTTCCTTCGACCAGAAGT
ACCATGCCACGGACCGTGCTCGCGGTCTGGACGAGAACTACAAGCTCAGC
GACAAGGCGACCACTGGCTGGCGTAGTCTGAACCACTACTTCGAGAAGGC
TCTCGACACTCCCTCGGGCAGGAAGTTGCGGGACTTTTACTCCCAGACCG
ATAAGCAGGTGCGCGATATTCACAACGAGGCTCGCAGACTTGCGGATCTG
AAGAGCGGCAAGTCTACTACTGAGGGTGGTGAGGCTCCTGCTCCTAGCAC
GGCGCCTGCTACTCAGCCGGCGGGTACTGCTGCTCCTGCTGAGCAGGCGT
AACGGAAAGATCACCCACATTTCCGTGACCCCCGTTTCAGGCGAAGCTGA
TGCCCAAAAGTCGGCCACTGTTACTTTCGAAAAGGAAGCATGTCTGAACG
CTCCACCGTCCACGTCGAGGGCATTGCCTCCGCTACCACCGACAAGGAGG
TCCAAGATTTCTTTAGCTTCTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_69120ATCC64974_69120Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_69120-T1ATCC64974_69120-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_69120-T1.cdsATCC64974_69120-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_69120-T1.exon3ATCC64974_69120-T1.exon3Aspergillus niger N402exon
ATCC64974_69120-T1.exon2ATCC64974_69120-T1.exon2Aspergillus niger N402exon
ATCC64974_69120-T1.exon1ATCC64974_69120-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
DBxrefPFAM:PF14605
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:2026046..2026972 -
Powered by Drupal