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ATCC64974_70590-T1, ATCC64974_70590-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_70590-T1
Unique NameATCC64974_70590-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:2484927..2486632+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_70590-T1 ID=ATCC64974_70590-T1|Name=ATCC64974_70590-T1|organism=Aspergillus niger N402|type=mRNA|length=1706bp|location=Sequence derived from alignment at OGUI01000010.1:2484927..2486632+ (Aspergillus niger N402)
ATGGCCGACTACCTTCTGTTCGAGGGCCCCATGGGCTACTCGCTTTTCAA
GGTCGCCCACCAGGGTGACAGCGTTGGAAACCGCTTGAAGGAGGTTCAAG
AAGGTGTTAACGACTTGGCCAGTTTTGGTAAAATGGTCGAACTGTCCAGT
TTCCTGCCTTTCGAGTATGTGGTTCAATTTTTCCCATAGGATCACTTTCC
CGCAGGAATCTGACAACTTCCAGGAACAACAAGCAGGCTCTCAGTGAAAT
CAACGATGTCTCCGAGGGTGTCGCTTCGGACACTCTGATCTCTTTCCTCG
AATTGAACTTGCCCAAGCCTAACAAGAAGAAGAAGGTTGTTCTGGGTCTT
GCCGACAAGGCCTTGGCTGGAAGTATCAAGTCTGCCTTCTCTTTCGTTGA
CTGCGAGACTGGAGACACCAGCGAAGTCGTCCAGGATATGCTTCGTGGAG
TTAGACTGCACGCCACCAAGCTGCTGAAGCAGCTGCGTGAGGGTGATATG
GACACCGCTCAGCTTGGTCTTGGTCACGCTTACTCTCGCGCCAAGGTTAA
GTTTTCCGTTCAGCGCGATGACAACCACATCATCCAGGCCATTGCTATCC
TCGACCAGCTCGACAAGGCCATCAACACTTTCTCCATGAGAGTCAGGGAA
TGGTACTCCTGGCACTTCCCCGAACTCTACAAGATTGTCTCCGACAACCA
ACGCTACGCGCAGATTGCCTTGTTCGTCCAGGACAAGAAGAGCTTGAACG
ACGAGAAGTTGCACGACATTGCTGCCCTTGTGGAGGATGATGAGGGTGTC
GCCCAGAGTATCATCGACGCTGCTAAGCACAGCATGGGTCAGGAGATCTC
CGAGACCGACATGGAGAACGTTATCTCTTTCGCCCAGCGCGTTGTCAGCC
TGTCCAAGTACCGCAAGTCTCTCCACCAGTACCTGATTTCCAAGATGAGC
GTTGTCGCCCCCAACCTTGCTGCCCTTATTGGTGAGATCGTTGGTGCTCG
CTTGATCTCCCACGCTGGTAGCTTGACCAACCTGTCCAAGTACCCCGCTT
CGACGGTTCAGATTCTCGGTGCTGAGAAGGCCCTCTTCAGAGCCTTGAAG
ACCAAGGGCAACACCCCCAAGTACGGTCTTCTGTACCACTCCTCTTTCAT
TGGAAGAGCTGGTCCCAAGAACAAGGGTCGCATCTCTCGCTTCCTTGCCA
ACAAGTGCTCCATCGCCTCCAGAATTGACAACTTCTCCGAGGAGCCCTCC
ACCAAGTTCGGAGAGGCCCTTAAGAAGCAGGTTGAGGAGCGTCTGGACTT
CTACGCCACTGGTGCTGCCCCTACCAAGAACGAAGTCGCCATGGTAAGTC
AACATAGCTAGTGTGATCGCTAGGACACTAGTGAACCACAAACCCCTTTT
CTCCGTAACAATCACTGATGGTCCTTACAGAAAAACGCCATGGATGCTGT
CCTTGCTGATATGGACATTGACGGCGCTGAGAGCGATGCCGAGATGCAGG
ATGCTGATGAGAAGGCCGAGAAGAAGGACAAGAAGGAGAAGAAGGAAAAG
AAGGACAAGAAGGAAAAGAAGGAGAAGAAGGAAAAGGGCGAGAAGGAGGA
GAAGAAGAAGAAGCGCAAGTCCGACGTTGGCGAGGGCGAGTCCGAGAAGA
AGAAGCGGAAGCACGACAGCGATGCTGAGCCGTCCAAAAAGAAGAAGAAG
GTTTAA
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Coding sequence (CDS) from alignment at OGUI01000010.1:2484927..2486632+

>ATCC64974_70590-T1 ID=ATCC64974_70590-T1|Name=ATCC64974_70590-T1|organism=Aspergillus niger N402|type=CDS|length=4680bp|location=Sequence derived from alignment at OGUI01000010.1:2484927..2486632+ (Aspergillus niger N402)
ATGGCCGACTACCTTCTGTTCGAGGGCCCCATGGGCTACTCGCTTTTCAA
GGTCGCCCACCAGGGTGACAGCGTTGGAAACCGCTTGAAGGAGGTTCAAG
AAGGTGTTAACGACTTGGCCAGTTTTGGTAAAATGGTCGAACTGTCCAGT
TTCCTGCCTTTCGAGAACAACAAGCAGGCTCTCAGTGAAATCAACGATGT
CTCCGAGGGTGTCGCTTCGGACACTCTGATCTCTTTCCTCGAATTGAACT
TGCCCAAGCCTAACAAGAAGAAGAAGGTTGTTCTGGGTCTTGCCGACAAG
GCCTTGGCTGGAAGTATCAAGTCTGCCTTCTCTTTCGTTGACTGCGAGAC
TGGAGACACCAGCGAAGTCGTCCAGGATATGCTTCGTGGAGTTAGACTGC
ACGCCACCAAGCTGCTGAAGCAGCTGCGTGAGGGTGATATGGACACCGCT
CAGCTTGGTCTTGGTCACGCTTACTCTCGCGCCAAGGTTAAGTTTTCCGT
TCAGCGCGATGACAACCACATCATCCAGGCCATTGCTATCCTCGACCAGC
TCGACAAGGCCATCAACACTTTCTCCATGAGAGTCAGGGAATGGTACTCC
TGGCACTTCCCCGAACTCTACAAGATTGTCTCCGACAACCAACGCTACGC
GCAGATTGCCTTGTTCGTCCAGGACAAGAAGAGCTTGAACGACGAGAAGT
TGCACGACATTGCTGCCCTTGTGGAGGATGATGAGGGTGTCGCCCAGAGT
ATCATCGACGCTGCTAAGCACAGCATGGGTCAGGAGATCTCCGAGACCGA
CATGGAGAACGTTATCTCTTTCGCCCAGCGCGTTGTCAGCCTGTCCAAGT
ACCGCAAGTCTCTCCACCAGTACCTGATTTCCAAGATGAGCGTTGTCGCC
CCCAACCTTGCTGCCCTTATTGGTGAGATCGTTGGTGCTCGCTTGATCTC
CCACGCTGGTAGCTTGACCAACCTGTCCAAGTACCCCGCTTCGACGGTTC
AGATTCTCGGTGCTGAGAAGGCCCTCTTCAGAGCCTTGAAGACCAAGGGC
AACACCCCCAAGTACGGTCTTCTGTACCACTCCTCTTTCATTGGAAGAGC
TGGTCCCAAGAACAAGGGTCGCATCTCTCGCTTCCTTGCCAACAAGTGCT
CCATCGCCTCCAGAATTGACAACTTCTCCGAGGAGCCCTCCACCAAGTTC
GGAGAGGCCCTTAAGAAGCAGGTTGAGGAGCGTCTGGACTTCTACGCCAC
TGGTGCTGCCCCTACCAAGAACGAAGTCGCCATGAAAAACGCCATGGATG
CTGTCCTTGCTGATATGGACATTGACGGCGCTGAGAGCGATGCCGAGATG
CAGGATGCTGATGAGAAGGCCGAGAAGAAGGACAAGAAGGAGAAGAAGGA
AAAGAAGGACAAGAAGGAAAAGAAGGAGAAGAAGGAAAAGGGCGAGAAGG
AGGAGAAGAAGAAGAAGCGCAAGTCCGACGTTGGCGAGGGCGAGTCCGAG
AAGAAGAAGCGGAAGCACGACAGCGATGCTGAGCCGTCCAAAAAGAAGAA
GAAGGTTTAAATGGCCGACTACCTTCTGTTCGAGGGCCCCATGGGCTACT
CGCTTTTCAAGGTCGCCCACCAGGGTGACAGCGTTGGAAACCGCTTGAAG
GAGGTTCAAGAAGGTGTTAACGACTTGGCCAGTTTTGGTAAAATGGTCGA
ACTGTCCAGTTTCCTGCCTTTCGAGAACAACAAGCAGGCTCTCAGTGAAA
TCAACGATGTCTCCGAGGGTGTCGCTTCGGACACTCTGATCTCTTTCCTC
GAATTGAACTTGCCCAAGCCTAACAAGAAGAAGAAGGTTGTTCTGGGTCT
TGCCGACAAGGCCTTGGCTGGAAGTATCAAGTCTGCCTTCTCTTTCGTTG
ACTGCGAGACTGGAGACACCAGCGAAGTCGTCCAGGATATGCTTCGTGGA
GTTAGACTGCACGCCACCAAGCTGCTGAAGCAGCTGCGTGAGGGTGATAT
GGACACCGCTCAGCTTGGTCTTGGTCACGCTTACTCTCGCGCCAAGGTTA
AGTTTTCCGTTCAGCGCGATGACAACCACATCATCCAGGCCATTGCTATC
CTCGACCAGCTCGACAAGGCCATCAACACTTTCTCCATGAGAGTCAGGGA
ATGGTACTCCTGGCACTTCCCCGAACTCTACAAGATTGTCTCCGACAACC
AACGCTACGCGCAGATTGCCTTGTTCGTCCAGGACAAGAAGAGCTTGAAC
GACGAGAAGTTGCACGACATTGCTGCCCTTGTGGAGGATGATGAGGGTGT
CGCCCAGAGTATCATCGACGCTGCTAAGCACAGCATGGGTCAGGAGATCT
CCGAGACCGACATGGAGAACGTTATCTCTTTCGCCCAGCGCGTTGTCAGC
CTGTCCAAGTACCGCAAGTCTCTCCACCAGTACCTGATTTCCAAGATGAG
CGTTGTCGCCCCCAACCTTGCTGCCCTTATTGGTGAGATCGTTGGTGCTC
GCTTGATCTCCCACGCTGGTAGCTTGACCAACCTGTCCAAGTACCCCGCT
TCGACGGTTCAGATTCTCGGTGCTGAGAAGGCCCTCTTCAGAGCCTTGAA
GACCAAGGGCAACACCCCCAAGTACGGTCTTCTGTACCACTCCTCTTTCA
TTGGAAGAGCTGGTCCCAAGAACAAGGGTCGCATCTCTCGCTTCCTTGCC
AACAAGTGCTCCATCGCCTCCAGAATTGACAACTTCTCCGAGGAGCCCTC
CACCAAGTTCGGAGAGGCCCTTAAGAAGCAGGTTGAGGAGCGTCTGGACT
TCTACGCCACTGGTGCTGCCCCTACCAAGAACGAAGTCGCCATGAAAAAC
GCCATGGATGCTGTCCTTGCTGATATGGACATTGACGGCGCTGAGAGCGA
TGCCGAGATGCAGGATGCTGATGAGAAGGCCGAGAAGAAGGACAAGAAGG
AGAAGAAGGAAAAGAAGGACAAGAAGGAAAAGAAGGAGAAGAAGGAAAAG
GGCGAGAAGGAGGAGAAGAAGAAGAAGCGCAAGTCCGACGTTGGCGAGGG
CGAGTCCGAGAAGAAGAAGCGGAAGCACGACAGCGATGCTGAGCCGTCCA
AAAAGAAGAAGAAGGTTTAAATGGCCGACTACCTTCTGTTCGAGGGCCCC
ATGGGCTACTCGCTTTTCAAGGTCGCCCACCAGGGTGACAGCGTTGGAAA
CCGCTTGAAGGAGGTTCAAGAAGGTGTTAACGACTTGGCCAGTTTTGGTA
AAATGGTCGAACTGTCCAGTTTCCTGCCTTTCGAGAACAACAAGCAGGCT
CTCAGTGAAATCAACGATGTCTCCGAGGGTGTCGCTTCGGACACTCTGAT
CTCTTTCCTCGAATTGAACTTGCCCAAGCCTAACAAGAAGAAGAAGGTTG
TTCTGGGTCTTGCCGACAAGGCCTTGGCTGGAAGTATCAAGTCTGCCTTC
TCTTTCGTTGACTGCGAGACTGGAGACACCAGCGAAGTCGTCCAGGATAT
GCTTCGTGGAGTTAGACTGCACGCCACCAAGCTGCTGAAGCAGCTGCGTG
AGGGTGATATGGACACCGCTCAGCTTGGTCTTGGTCACGCTTACTCTCGC
GCCAAGGTTAAGTTTTCCGTTCAGCGCGATGACAACCACATCATCCAGGC
CATTGCTATCCTCGACCAGCTCGACAAGGCCATCAACACTTTCTCCATGA
GAGTCAGGGAATGGTACTCCTGGCACTTCCCCGAACTCTACAAGATTGTC
TCCGACAACCAACGCTACGCGCAGATTGCCTTGTTCGTCCAGGACAAGAA
GAGCTTGAACGACGAGAAGTTGCACGACATTGCTGCCCTTGTGGAGGATG
ATGAGGGTGTCGCCCAGAGTATCATCGACGCTGCTAAGCACAGCATGGGT
CAGGAGATCTCCGAGACCGACATGGAGAACGTTATCTCTTTCGCCCAGCG
CGTTGTCAGCCTGTCCAAGTACCGCAAGTCTCTCCACCAGTACCTGATTT
CCAAGATGAGCGTTGTCGCCCCCAACCTTGCTGCCCTTATTGGTGAGATC
GTTGGTGCTCGCTTGATCTCCCACGCTGGTAGCTTGACCAACCTGTCCAA
GTACCCCGCTTCGACGGTTCAGATTCTCGGTGCTGAGAAGGCCCTCTTCA
GAGCCTTGAAGACCAAGGGCAACACCCCCAAGTACGGTCTTCTGTACCAC
TCCTCTTTCATTGGAAGAGCTGGTCCCAAGAACAAGGGTCGCATCTCTCG
CTTCCTTGCCAACAAGTGCTCCATCGCCTCCAGAATTGACAACTTCTCCG
AGGAGCCCTCCACCAAGTTCGGAGAGGCCCTTAAGAAGCAGGTTGAGGAG
CGTCTGGACTTCTACGCCACTGGTGCTGCCCCTACCAAGAACGAAGTCGC
CATGAAAAACGCCATGGATGCTGTCCTTGCTGATATGGACATTGACGGCG
CTGAGAGCGATGCCGAGATGCAGGATGCTGATGAGAAGGCCGAGAAGAAG
GACAAGAAGGAGAAGAAGGAAAAGAAGGACAAGAAGGAAAAGAAGGAGAA
GAAGGAAAAGGGCGAGAAGGAGGAGAAGAAGAAGAAGCGCAAGTCCGACG
TTGGCGAGGGCGAGTCCGAGAAGAAGAAGCGGAAGCACGACAGCGATGCT
GAGCCGTCCAAAAAGAAGAAGAAGGTTTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOP56ATCC64974_70590Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_70590-T1.exon1ATCC64974_70590-T1.exon1Aspergillus niger N402exon
ATCC64974_70590-T1.exon2ATCC64974_70590-T1.exon2Aspergillus niger N402exon
ATCC64974_70590-T1.exon3ATCC64974_70590-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_70590-T1.cdsATCC64974_70590-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_70590-T1ATCC64974_70590-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036070
DBxrefInterPro:IPR002687
DBxrefInterPro:IPR042239
DBxrefInterPro:IPR012974
DBxrefInterPro:IPR029012
DBxrefInterPro:IPR012976
DBxrefPFAM:PF08156
DBxrefPFAM:PF01798
ProductsnoRNP complex protein nop56
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:2484927..2486632 +
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