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ATCC64974_70890-T1, ATCC64974_70890-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_70890-T1
Unique NameATCC64974_70890-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:2566701..2568180-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_70890-T1 ID=ATCC64974_70890-T1|Name=ATCC64974_70890-T1|organism=Aspergillus niger N402|type=mRNA|length=1480bp|location=Sequence derived from alignment at OGUI01000010.1:2566701..2568180- (Aspergillus niger N402)
ATGCTGCCATCCCTGCTTTCCGTTTTATTCTTCCTGCTCTATGCAGTGAA
CGCTGTTCCACTGGCGCCCCGGGCGAGTGCACTCGCCGGGATCGACACCA
AGTCCTTCTCTAAGACCAAAGATTATCCCCTTCCCAACCTGGGCAACATC
GTTGCTCATGATCCTAATGTCATTCAGCATGATGGCTATTTCTACTTGTA
CAAAGGTGGTGTGCACATTCCGATTCACAGAGCCCGCTCCCTCAGTGGGC
CTTGGGAACAGGTCGGGACCGTCCTGGACGACTCCAGCGTGATTCCAAAA
CAGAACCGCTCTCGTCCTTGGGCCCCTACGACCATTCAGCACGACAACCG
CTTCTACTGCTTCTACGCGATCAGCGAGAACGGCAGCCGCGACAGCGCCA
TTGGAGTCGCCTCTTCGGATACTCCCGTCGGTGGAAACTGGACGGACCAT
GGCGCTGTCGTCAATACCGGCAAGGGAGACCTGTCGGACATCTATCCTTA
CTCGGTATCCAATGCGATTGACGGCGCATTCATCACCGATCAAGAGACCG
GACAGTCTCACCTGCTTTACGGGAGCTATTGGCATGGCATTTTCTCGGTG
CCATTGGCCGATGATCTCCTTTCCGTCAAAACCCCGAAGACCCCGAACGC
GACCAACCTGGCCTACATCCCAGATGCCAAGTCCAAGCCTATCGAGGGCT
CTTTCATGACTTACAAGGCGCCTTACTACTACCTGTGGTTCAGTCACGGC
AAATGTTGTCACTTTGATATTCACGCTTTTCCGCCCATGGGAGACGAGTA
CGTGCACATGATCTTCTATTCGAGAACTTGGTAGCTAACATTTACAACAG
GTACAACATCCGGGTCGGCAGATCTAAGAGTGCGACAGGTCCTTTCGTGG
ACAAGGATGGCCATGATACCCTCAAGGGAGGCGGTACCATCGTCTACGGC
TCCAACCATGGAATTGTCTATGCCCCGGGTGGTGTGGGCGTGTTGATCAA
CAACGGCAGCGAAGCCGATGTCTTGTATTACCATTATCGTACGTTTACAG
TCCACTGTTGTGGGGAAGTCAGCTAACAGAGCTTGCAGTCAACACTACAT
CTGGTTTCGCACAGGGCGTGAGTCTAGCCTTAACTATCCATTGACAGGAT
GATACTAACGCAATACAGGACGCGCACTTGGGATGGAACTATCTGCACTA
TGTAAATGGATGGCCAGTGGCTGTCGAGGGGTATGTTAATGCCAACGGCA
AATAACGCTCAGGCACTAAAGGTGGAAACTTCAGTAAATCTAGCATAAAC
GCTACATCAAACGAAAGCAGTGGTCGGATTCTTCAACCGAACCACTCGCT
TAATTCACTAGCGCTTCTGTGTATGTGCTGTCTAATCTTGCTGATACTCC
CTACCCACTATACTGGCAACAAGCTCATTGTTCTATTCGTTGCGCTAGTC
ATTGGTGCATTCCTTTGGCTCTACAGTTGA
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Coding sequence (CDS) from alignment at OGUI01000010.1:2566701..2568180-

>ATCC64974_70890-T1 ID=ATCC64974_70890-T1|Name=ATCC64974_70890-T1|organism=Aspergillus niger N402|type=CDS|length=7164bp|location=Sequence derived from alignment at OGUI01000010.1:2566701..2568180- (Aspergillus niger N402)
TCATTGGTGCATTCCTTTGGCTCTACAGTTGATAAATCTAGCATAAACGC
TACATCAAACGAAAGCAGTGGTCGGATTCTTCAACCGAACCACTCGCTTA
ATTCACTAGCGCTTCTGTGACGCGCACTTGGGATGGAACTATCTGCACTA
TGTAAATGGATGGCCAGTGGCTGTCGAGGGTCAACACTACATCTGGTTTC
GCACAGGGCGTACAACATCCGGGTCGGCAGATCTAAGAGTGCGACAGGTC
CTTTCGTGGACAAGGATGGCCATGATACCCTCAAGGGAGGCGGTACCATC
GTCTACGGCTCCAACCATGGAATTGTCTATGCCCCGGGTGGTGTGGGCGT
GTTGATCAACAACGGCAGCGAAGCCGATGTCTTGTATTACCATTATCATG
CTGCCATCCCTGCTTTCCGTTTTATTCTTCCTGCTCTATGCAGTGAACGC
TGTTCCACTGGCGCCCCGGGCGAGTGCACTCGCCGGGATCGACACCAAGT
CCTTCTCTAAGACCAAAGATTATCCCCTTCCCAACCTGGGCAACATCGTT
GCTCATGATCCTAATGTCATTCAGCATGATGGCTATTTCTACTTGTACAA
AGGTGGTGTGCACATTCCGATTCACAGAGCCCGCTCCCTCAGTGGGCCTT
GGGAACAGGTCGGGACCGTCCTGGACGACTCCAGCGTGATTCCAAAACAG
AACCGCTCTCGTCCTTGGGCCCCTACGACCATTCAGCACGACAACCGCTT
CTACTGCTTCTACGCGATCAGCGAGAACGGCAGCCGCGACAGCGCCATTG
GAGTCGCCTCTTCGGATACTCCCGTCGGTGGAAACTGGACGGACCATGGC
GCTGTCGTCAATACCGGCAAGGGAGACCTGTCGGACATCTATCCTTACTC
GGTATCCAATGCGATTGACGGCGCATTCATCACCGATCAAGAGACCGGAC
AGTCTCACCTGCTTTACGGGAGCTATTGGCATGGCATTTTCTCGGTGCCA
TTGGCCGATGATCTCCTTTCCGTCAAAACCCCGAAGACCCCGAACGCGAC
CAACCTGGCCTACATCCCAGATGCCAAGTCCAAGCCTATCGAGGGCTCTT
TCATGACTTACAAGGCGCCTTACTACTACCTGTGGTTCAGTCACGGCAAA
TGTTGTCACTTTGATATTCACGCTTTTCCGCCCATGGGAGACGATCATTG
GTGCATTCCTTTGGCTCTACAGTTGATAAATCTAGCATAAACGCTACATC
AAACGAAAGCAGTGGTCGGATTCTTCAACCGAACCACTCGCTTAATTCAC
TAGCGCTTCTGTGACGCGCACTTGGGATGGAACTATCTGCACTATGTAAA
TGGATGGCCAGTGGCTGTCGAGGGTCAACACTACATCTGGTTTCGCACAG
GGCGTACAACATCCGGGTCGGCAGATCTAAGAGTGCGACAGGTCCTTTCG
TGGACAAGGATGGCCATGATACCCTCAAGGGAGGCGGTACCATCGTCTAC
GGCTCCAACCATGGAATTGTCTATGCCCCGGGTGGTGTGGGCGTGTTGAT
CAACAACGGCAGCGAAGCCGATGTCTTGTATTACCATTATCATGCTGCCA
TCCCTGCTTTCCGTTTTATTCTTCCTGCTCTATGCAGTGAACGCTGTTCC
ACTGGCGCCCCGGGCGAGTGCACTCGCCGGGATCGACACCAAGTCCTTCT
CTAAGACCAAAGATTATCCCCTTCCCAACCTGGGCAACATCGTTGCTCAT
GATCCTAATGTCATTCAGCATGATGGCTATTTCTACTTGTACAAAGGTGG
TGTGCACATTCCGATTCACAGAGCCCGCTCCCTCAGTGGGCCTTGGGAAC
AGGTCGGGACCGTCCTGGACGACTCCAGCGTGATTCCAAAACAGAACCGC
TCTCGTCCTTGGGCCCCTACGACCATTCAGCACGACAACCGCTTCTACTG
CTTCTACGCGATCAGCGAGAACGGCAGCCGCGACAGCGCCATTGGAGTCG
CCTCTTCGGATACTCCCGTCGGTGGAAACTGGACGGACCATGGCGCTGTC
GTCAATACCGGCAAGGGAGACCTGTCGGACATCTATCCTTACTCGGTATC
CAATGCGATTGACGGCGCATTCATCACCGATCAAGAGACCGGACAGTCTC
ACCTGCTTTACGGGAGCTATTGGCATGGCATTTTCTCGGTGCCATTGGCC
GATGATCTCCTTTCCGTCAAAACCCCGAAGACCCCGAACGCGACCAACCT
GGCCTACATCCCAGATGCCAAGTCCAAGCCTATCGAGGGCTCTTTCATGA
CTTACAAGGCGCCTTACTACTACCTGTGGTTCAGTCACGGCAAATGTTGT
CACTTTGATATTCACGCTTTTCCGCCCATGGGAGACGATCATTGGTGCAT
TCCTTTGGCTCTACAGTTGATAAATCTAGCATAAACGCTACATCAAACGA
AAGCAGTGGTCGGATTCTTCAACCGAACCACTCGCTTAATTCACTAGCGC
TTCTGTGACGCGCACTTGGGATGGAACTATCTGCACTATGTAAATGGATG
GCCAGTGGCTGTCGAGGGTCAACACTACATCTGGTTTCGCACAGGGCGTA
CAACATCCGGGTCGGCAGATCTAAGAGTGCGACAGGTCCTTTCGTGGACA
AGGATGGCCATGATACCCTCAAGGGAGGCGGTACCATCGTCTACGGCTCC
AACCATGGAATTGTCTATGCCCCGGGTGGTGTGGGCGTGTTGATCAACAA
CGGCAGCGAAGCCGATGTCTTGTATTACCATTATCATGCTGCCATCCCTG
CTTTCCGTTTTATTCTTCCTGCTCTATGCAGTGAACGCTGTTCCACTGGC
GCCCCGGGCGAGTGCACTCGCCGGGATCGACACCAAGTCCTTCTCTAAGA
CCAAAGATTATCCCCTTCCCAACCTGGGCAACATCGTTGCTCATGATCCT
AATGTCATTCAGCATGATGGCTATTTCTACTTGTACAAAGGTGGTGTGCA
CATTCCGATTCACAGAGCCCGCTCCCTCAGTGGGCCTTGGGAACAGGTCG
GGACCGTCCTGGACGACTCCAGCGTGATTCCAAAACAGAACCGCTCTCGT
CCTTGGGCCCCTACGACCATTCAGCACGACAACCGCTTCTACTGCTTCTA
CGCGATCAGCGAGAACGGCAGCCGCGACAGCGCCATTGGAGTCGCCTCTT
CGGATACTCCCGTCGGTGGAAACTGGACGGACCATGGCGCTGTCGTCAAT
ACCGGCAAGGGAGACCTGTCGGACATCTATCCTTACTCGGTATCCAATGC
GATTGACGGCGCATTCATCACCGATCAAGAGACCGGACAGTCTCACCTGC
TTTACGGGAGCTATTGGCATGGCATTTTCTCGGTGCCATTGGCCGATGAT
CTCCTTTCCGTCAAAACCCCGAAGACCCCGAACGCGACCAACCTGGCCTA
CATCCCAGATGCCAAGTCCAAGCCTATCGAGGGCTCTTTCATGACTTACA
AGGCGCCTTACTACTACCTGTGGTTCAGTCACGGCAAATGTTGTCACTTT
GATATTCACGCTTTTCCGCCCATGGGAGACGATCATTGGTGCATTCCTTT
GGCTCTACAGTTGATAAATCTAGCATAAACGCTACATCAAACGAAAGCAG
TGGTCGGATTCTTCAACCGAACCACTCGCTTAATTCACTAGCGCTTCTGT
GACGCGCACTTGGGATGGAACTATCTGCACTATGTAAATGGATGGCCAGT
GGCTGTCGAGGGTCAACACTACATCTGGTTTCGCACAGGGCGTACAACAT
CCGGGTCGGCAGATCTAAGAGTGCGACAGGTCCTTTCGTGGACAAGGATG
GCCATGATACCCTCAAGGGAGGCGGTACCATCGTCTACGGCTCCAACCAT
GGAATTGTCTATGCCCCGGGTGGTGTGGGCGTGTTGATCAACAACGGCAG
CGAAGCCGATGTCTTGTATTACCATTATCATGCTGCCATCCCTGCTTTCC
GTTTTATTCTTCCTGCTCTATGCAGTGAACGCTGTTCCACTGGCGCCCCG
GGCGAGTGCACTCGCCGGGATCGACACCAAGTCCTTCTCTAAGACCAAAG
ATTATCCCCTTCCCAACCTGGGCAACATCGTTGCTCATGATCCTAATGTC
ATTCAGCATGATGGCTATTTCTACTTGTACAAAGGTGGTGTGCACATTCC
GATTCACAGAGCCCGCTCCCTCAGTGGGCCTTGGGAACAGGTCGGGACCG
TCCTGGACGACTCCAGCGTGATTCCAAAACAGAACCGCTCTCGTCCTTGG
GCCCCTACGACCATTCAGCACGACAACCGCTTCTACTGCTTCTACGCGAT
CAGCGAGAACGGCAGCCGCGACAGCGCCATTGGAGTCGCCTCTTCGGATA
CTCCCGTCGGTGGAAACTGGACGGACCATGGCGCTGTCGTCAATACCGGC
AAGGGAGACCTGTCGGACATCTATCCTTACTCGGTATCCAATGCGATTGA
CGGCGCATTCATCACCGATCAAGAGACCGGACAGTCTCACCTGCTTTACG
GGAGCTATTGGCATGGCATTTTCTCGGTGCCATTGGCCGATGATCTCCTT
TCCGTCAAAACCCCGAAGACCCCGAACGCGACCAACCTGGCCTACATCCC
AGATGCCAAGTCCAAGCCTATCGAGGGCTCTTTCATGACTTACAAGGCGC
CTTACTACTACCTGTGGTTCAGTCACGGCAAATGTTGTCACTTTGATATT
CACGCTTTTCCGCCCATGGGAGACGATCATTGGTGCATTCCTTTGGCTCT
ACAGTTGATAAATCTAGCATAAACGCTACATCAAACGAAAGCAGTGGTCG
GATTCTTCAACCGAACCACTCGCTTAATTCACTAGCGCTTCTGTGACGCG
CACTTGGGATGGAACTATCTGCACTATGTAAATGGATGGCCAGTGGCTGT
CGAGGGTCAACACTACATCTGGTTTCGCACAGGGCGTACAACATCCGGGT
CGGCAGATCTAAGAGTGCGACAGGTCCTTTCGTGGACAAGGATGGCCATG
ATACCCTCAAGGGAGGCGGTACCATCGTCTACGGCTCCAACCATGGAATT
GTCTATGCCCCGGGTGGTGTGGGCGTGTTGATCAACAACGGCAGCGAAGC
CGATGTCTTGTATTACCATTATCATGCTGCCATCCCTGCTTTCCGTTTTA
TTCTTCCTGCTCTATGCAGTGAACGCTGTTCCACTGGCGCCCCGGGCGAG
TGCACTCGCCGGGATCGACACCAAGTCCTTCTCTAAGACCAAAGATTATC
CCCTTCCCAACCTGGGCAACATCGTTGCTCATGATCCTAATGTCATTCAG
CATGATGGCTATTTCTACTTGTACAAAGGTGGTGTGCACATTCCGATTCA
CAGAGCCCGCTCCCTCAGTGGGCCTTGGGAACAGGTCGGGACCGTCCTGG
ACGACTCCAGCGTGATTCCAAAACAGAACCGCTCTCGTCCTTGGGCCCCT
ACGACCATTCAGCACGACAACCGCTTCTACTGCTTCTACGCGATCAGCGA
GAACGGCAGCCGCGACAGCGCCATTGGAGTCGCCTCTTCGGATACTCCCG
TCGGTGGAAACTGGACGGACCATGGCGCTGTCGTCAATACCGGCAAGGGA
GACCTGTCGGACATCTATCCTTACTCGGTATCCAATGCGATTGACGGCGC
ATTCATCACCGATCAAGAGACCGGACAGTCTCACCTGCTTTACGGGAGCT
ATTGGCATGGCATTTTCTCGGTGCCATTGGCCGATGATCTCCTTTCCGTC
AAAACCCCGAAGACCCCGAACGCGACCAACCTGGCCTACATCCCAGATGC
CAAGTCCAAGCCTATCGAGGGCTCTTTCATGACTTACAAGGCGCCTTACT
ACTACCTGTGGTTCAGTCACGGCAAATGTTGTCACTTTGATATTCACGCT
TTTCCGCCCATGGGAGACGATCATTGGTGCATTCCTTTGGCTCTACAGTT
GATAAATCTAGCATAAACGCTACATCAAACGAAAGCAGTGGTCGGATTCT
TCAACCGAACCACTCGCTTAATTCACTAGCGCTTCTGTGACGCGCACTTG
GGATGGAACTATCTGCACTATGTAAATGGATGGCCAGTGGCTGTCGAGGG
TCAACACTACATCTGGTTTCGCACAGGGCGTACAACATCCGGGTCGGCAG
ATCTAAGAGTGCGACAGGTCCTTTCGTGGACAAGGATGGCCATGATACCC
TCAAGGGAGGCGGTACCATCGTCTACGGCTCCAACCATGGAATTGTCTAT
GCCCCGGGTGGTGTGGGCGTGTTGATCAACAACGGCAGCGAAGCCGATGT
CTTGTATTACCATTATCATGCTGCCATCCCTGCTTTCCGTTTTATTCTTC
CTGCTCTATGCAGTGAACGCTGTTCCACTGGCGCCCCGGGCGAGTGCACT
CGCCGGGATCGACACCAAGTCCTTCTCTAAGACCAAAGATTATCCCCTTC
CCAACCTGGGCAACATCGTTGCTCATGATCCTAATGTCATTCAGCATGAT
GGCTATTTCTACTTGTACAAAGGTGGTGTGCACATTCCGATTCACAGAGC
CCGCTCCCTCAGTGGGCCTTGGGAACAGGTCGGGACCGTCCTGGACGACT
CCAGCGTGATTCCAAAACAGAACCGCTCTCGTCCTTGGGCCCCTACGACC
ATTCAGCACGACAACCGCTTCTACTGCTTCTACGCGATCAGCGAGAACGG
CAGCCGCGACAGCGCCATTGGAGTCGCCTCTTCGGATACTCCCGTCGGTG
GAAACTGGACGGACCATGGCGCTGTCGTCAATACCGGCAAGGGAGACCTG
TCGGACATCTATCCTTACTCGGTATCCAATGCGATTGACGGCGCATTCAT
CACCGATCAAGAGACCGGACAGTCTCACCTGCTTTACGGGAGCTATTGGC
ATGGCATTTTCTCGGTGCCATTGGCCGATGATCTCCTTTCCGTCAAAACC
CCGAAGACCCCGAACGCGACCAACCTGGCCTACATCCCAGATGCCAAGTC
CAAGCCTATCGAGGGCTCTTTCATGACTTACAAGGCGCCTTACTACTACC
TGTGGTTCAGTCACGGCAAATGTTGTCACTTTGATATTCACGCTTTTCCG
CCCATGGGAGACGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0046558arabinan endo-1,5-alpha-L-arabinosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_70890ATCC64974_70890Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_70890-T1ATCC64974_70890-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_70890-T1.cdsATCC64974_70890-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_70890-T1.exon6ATCC64974_70890-T1.exon6Aspergillus niger N402exon
ATCC64974_70890-T1.exon5ATCC64974_70890-T1.exon5Aspergillus niger N402exon
ATCC64974_70890-T1.exon4ATCC64974_70890-T1.exon4Aspergillus niger N402exon
ATCC64974_70890-T1.exon3ATCC64974_70890-T1.exon3Aspergillus niger N402exon
ATCC64974_70890-T1.exon2ATCC64974_70890-T1.exon2Aspergillus niger N402exon
ATCC64974_70890-T1.exon1ATCC64974_70890-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH43_30
NoteCAZy:GH43_7
NoteCAZy:GH43_8
NoteCAZy:GH43_4
NoteCAZy:GH43_3
NoteCAZy:GH43
NoteCAZy:GH43_5
NoteCAZy:GH43_6
DBxrefInterPro:IPR023296
DBxrefInterPro:IPR006710
DBxrefInterPro:IPR016840
DBxrefPFAM:PF04616
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:2566701..2568180 -
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