You are here

Home

ATCC64974_7580-T1, ATCC64974_7580-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_7580-T1
Unique NameATCC64974_7580-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:63772..65095+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_7580-T1 ID=ATCC64974_7580-T1|Name=ATCC64974_7580-T1|organism=Aspergillus niger N402|type=mRNA|length=1324bp|location=Sequence derived from alignment at OGUI01000002.1:63772..65095+ (Aspergillus niger N402)
ATGTCTACGTCTGAAAATGGGTCACCTCGGGTTCTACGTGTCCCCAGGTC
TGATGAGCCCGACAGTTATGTGCTTCTCCATGTCACACGTACCAGTTCGG
CTGCATTAGACTTGAATCTCGCTGCAACGGAAGGAGAATTTCCGTATAAA
GGGGTCGGTATGGAGAATCCATAATGCTGTTCCCTTTACCTGTTCCTTCT
TGAAGTATTGTGATATACTAAGTCACAATAGTGCAACAGTCTCGTGCGCA
GACTCATCGTTCAAAGAGTTATCAGGGAACCGATGAGGACTGGGATCTTA
TCTTGCTGCGTGCCTTGGGCCAGCTAGAGATCAATACAGATAAATCAGAG
CTGCTATCTGGTGTCGAACTATCCGCTAGTATTAAGGCATTAGGTAGGCA
GAGCAATCAACTGGTCCTCACTATTCGCCGAAGGATCCAAACTATAACTG
TAAACCTGACCACCAAATAATATAATGATGTGGTGCTGATGATTCACAGC
AAAGACTCGGTTCTATAGCGCTCAAGCAGGATGATGAACAAGATATTCAG
CTCTTCGACTGGTCCGCCGTCGCCATTGCCAGAGCTGATATGCTTGAGCA
GCGGCTATCAAGATTGCAACAGCAGTATCGCGCAGCCGACAATACCATCA
AGCAGCTCAATAAGCAAATTGAGGACTTCATCACTGCAAAATGCCGCCAT
GAGGAACAGCTTATGACAAACTTTACTCAGGTTCTAAATCAGAAGAAGCT
CAAAATCCGCAATCAACAACGCTTGTTGGCTTCGGCGAAAATTGATGTGG
ACGATGGTAAGGTCGCATGTCTGAGTTAAAACAACAATAGCTGATACTGG
AATGATAAAAATGTAGCTGGTCAATGTCGGGCTGCCTCATCAAAAGTTGG
GGCCCGTGTCGGGAGCATGAAGCATGCGAAACGTCCTATTGTGGAAACGA
GCGATGACGAGGCTGAAAGCGATAATGGCTCGGAGAGTTTGGATCAGACC
AAGCATCAATCCAGTCCAAGAAGAATGATAGACACGGATGACGAACCAAA
TTCGACTCCGCAGCCATTGGAGGATGTGGGTGTAGATGATACCACTGACG
AAGATTTGCCCACAGCGTCCGGCGTCGATCAGGGAATAAGTGAACAGAAC
AATATGGAAGAAGCTCACCATCCACCTAGGCTGCAAGAACAGTCACCTCC
ACCCCGCAGGGAGCTTCCATTCGCCAAAGGGTCAAAATCAAGCAAAGACA
CCGTACAGAATATACAGCATCAGCACGACACTGCCGAAGAAACTGCAGGC
GAGACAGACGACGATGAGCTATGA
back to top

Coding sequence (CDS) from alignment at OGUI01000002.1:63772..65095+

>ATCC64974_7580-T1 ID=ATCC64974_7580-T1|Name=ATCC64974_7580-T1|organism=Aspergillus niger N402|type=CDS|length=4560bp|location=Sequence derived from alignment at OGUI01000002.1:63772..65095+ (Aspergillus niger N402)
ATGTCTACGTCTGAAAATGGGTCACCTCGGGTTCTACGTGTCCCCAGGTC
TGATGAGCCCGACAGTTATGTGCTTCTCCATGTCACACGTACCAGTTCGG
CTGCATTAGACTTGAATCTCGCTGCAACGGAAGGAGAATTTCCGTATAAA
GGGGTCGTGCAACAGTCTCGTGCGCAGACTCATCGTTCAAAGAGTTATCA
GGGAACCGATGAGGACTGGGATCTTATCTTGCTGCGTGCCTTGGGCCAGC
TAGAGATCAATACAGATAAATCAGAGCTGCTATCTGGTGTCGAACTATCC
GCTAGTATTAAGGCATTAGGTAGGCAGAGCAATCAACTGGTCCTCACTAT
TCGCCGAAGGATCCAAACTATAACTCAAAGACTCGGTTCTATAGCGCTCA
AGCAGGATGATGAACAAGATATTCAGCTCTTCGACTGGTCCGCCGTCGCC
ATTGCCAGAGCTGATATGCTTGAGCAGCGGCTATCAAGATTGCAACAGCA
GTATCGCGCAGCCGACAATACCATCAAGCAGCTCAATAAGCAAATTGAGG
ACTTCATCACTGCAAAATGCCGCCATGAGGAACAGCTTATGACAAACTTT
ACTCAGGTTCTAAATCAGAAGAAGCTCAAAATCCGCAATCAACAACGCTT
GTTGGCTTCGGCGAAAATTGATGTGGACGATGCTGGTCAATGTCGGGCTG
CCTCATCAAAAGTTGGGGCCCGTGTCGGGAGCATGAAGCATGCGAAACGT
CCTATTGTGGAAACGAGCGATGACGAGGCTGAAAGCGATAATGGCTCGGA
GAGTTTGGATCAGACCAAGCATCAATCCAGTCCAAGAAGAATGATAGACA
CGGATGACGAACCAAATTCGACTCCGCAGCCATTGGAGGATGTGGGTGTA
GATGATACCACTGACGAAGATTTGCCCACAGCGTCCGGCGTCGATCAGGG
AATAAGTGAACAGAACAATATGGAAGAAGCTCACCATCCACCTAGGCTGC
AAGAACAGTCACCTCCACCCCGCAGGGAGCTTCCATTCGCCAAAGGGTCA
AAATCAAGCAAAGACACCGTACAGAATATACAGCATCAGCACGACACTGC
CGAAGAAACTGCAGGCGAGACAGACGACGATGAGCTATGAATGTCTACGT
CTGAAAATGGGTCACCTCGGGTTCTACGTGTCCCCAGGTCTGATGAGCCC
GACAGTTATGTGCTTCTCCATGTCACACGTACCAGTTCGGCTGCATTAGA
CTTGAATCTCGCTGCAACGGAAGGAGAATTTCCGTATAAAGGGGTCGTGC
AACAGTCTCGTGCGCAGACTCATCGTTCAAAGAGTTATCAGGGAACCGAT
GAGGACTGGGATCTTATCTTGCTGCGTGCCTTGGGCCAGCTAGAGATCAA
TACAGATAAATCAGAGCTGCTATCTGGTGTCGAACTATCCGCTAGTATTA
AGGCATTAGGTAGGCAGAGCAATCAACTGGTCCTCACTATTCGCCGAAGG
ATCCAAACTATAACTCAAAGACTCGGTTCTATAGCGCTCAAGCAGGATGA
TGAACAAGATATTCAGCTCTTCGACTGGTCCGCCGTCGCCATTGCCAGAG
CTGATATGCTTGAGCAGCGGCTATCAAGATTGCAACAGCAGTATCGCGCA
GCCGACAATACCATCAAGCAGCTCAATAAGCAAATTGAGGACTTCATCAC
TGCAAAATGCCGCCATGAGGAACAGCTTATGACAAACTTTACTCAGGTTC
TAAATCAGAAGAAGCTCAAAATCCGCAATCAACAACGCTTGTTGGCTTCG
GCGAAAATTGATGTGGACGATGCTGGTCAATGTCGGGCTGCCTCATCAAA
AGTTGGGGCCCGTGTCGGGAGCATGAAGCATGCGAAACGTCCTATTGTGG
AAACGAGCGATGACGAGGCTGAAAGCGATAATGGCTCGGAGAGTTTGGAT
CAGACCAAGCATCAATCCAGTCCAAGAAGAATGATAGACACGGATGACGA
ACCAAATTCGACTCCGCAGCCATTGGAGGATGTGGGTGTAGATGATACCA
CTGACGAAGATTTGCCCACAGCGTCCGGCGTCGATCAGGGAATAAGTGAA
CAGAACAATATGGAAGAAGCTCACCATCCACCTAGGCTGCAAGAACAGTC
ACCTCCACCCCGCAGGGAGCTTCCATTCGCCAAAGGGTCAAAATCAAGCA
AAGACACCGTACAGAATATACAGCATCAGCACGACACTGCCGAAGAAACT
GCAGGCGAGACAGACGACGATGAGCTATGAATGTCTACGTCTGAAAATGG
GTCACCTCGGGTTCTACGTGTCCCCAGGTCTGATGAGCCCGACAGTTATG
TGCTTCTCCATGTCACACGTACCAGTTCGGCTGCATTAGACTTGAATCTC
GCTGCAACGGAAGGAGAATTTCCGTATAAAGGGGTCGTGCAACAGTCTCG
TGCGCAGACTCATCGTTCAAAGAGTTATCAGGGAACCGATGAGGACTGGG
ATCTTATCTTGCTGCGTGCCTTGGGCCAGCTAGAGATCAATACAGATAAA
TCAGAGCTGCTATCTGGTGTCGAACTATCCGCTAGTATTAAGGCATTAGG
TAGGCAGAGCAATCAACTGGTCCTCACTATTCGCCGAAGGATCCAAACTA
TAACTCAAAGACTCGGTTCTATAGCGCTCAAGCAGGATGATGAACAAGAT
ATTCAGCTCTTCGACTGGTCCGCCGTCGCCATTGCCAGAGCTGATATGCT
TGAGCAGCGGCTATCAAGATTGCAACAGCAGTATCGCGCAGCCGACAATA
CCATCAAGCAGCTCAATAAGCAAATTGAGGACTTCATCACTGCAAAATGC
CGCCATGAGGAACAGCTTATGACAAACTTTACTCAGGTTCTAAATCAGAA
GAAGCTCAAAATCCGCAATCAACAACGCTTGTTGGCTTCGGCGAAAATTG
ATGTGGACGATGCTGGTCAATGTCGGGCTGCCTCATCAAAAGTTGGGGCC
CGTGTCGGGAGCATGAAGCATGCGAAACGTCCTATTGTGGAAACGAGCGA
TGACGAGGCTGAAAGCGATAATGGCTCGGAGAGTTTGGATCAGACCAAGC
ATCAATCCAGTCCAAGAAGAATGATAGACACGGATGACGAACCAAATTCG
ACTCCGCAGCCATTGGAGGATGTGGGTGTAGATGATACCACTGACGAAGA
TTTGCCCACAGCGTCCGGCGTCGATCAGGGAATAAGTGAACAGAACAATA
TGGAAGAAGCTCACCATCCACCTAGGCTGCAAGAACAGTCACCTCCACCC
CGCAGGGAGCTTCCATTCGCCAAAGGGTCAAAATCAAGCAAAGACACCGT
ACAGAATATACAGCATCAGCACGACACTGCCGAAGAAACTGCAGGCGAGA
CAGACGACGATGAGCTATGAATGTCTACGTCTGAAAATGGGTCACCTCGG
GTTCTACGTGTCCCCAGGTCTGATGAGCCCGACAGTTATGTGCTTCTCCA
TGTCACACGTACCAGTTCGGCTGCATTAGACTTGAATCTCGCTGCAACGG
AAGGAGAATTTCCGTATAAAGGGGTCGTGCAACAGTCTCGTGCGCAGACT
CATCGTTCAAAGAGTTATCAGGGAACCGATGAGGACTGGGATCTTATCTT
GCTGCGTGCCTTGGGCCAGCTAGAGATCAATACAGATAAATCAGAGCTGC
TATCTGGTGTCGAACTATCCGCTAGTATTAAGGCATTAGGTAGGCAGAGC
AATCAACTGGTCCTCACTATTCGCCGAAGGATCCAAACTATAACTCAAAG
ACTCGGTTCTATAGCGCTCAAGCAGGATGATGAACAAGATATTCAGCTCT
TCGACTGGTCCGCCGTCGCCATTGCCAGAGCTGATATGCTTGAGCAGCGG
CTATCAAGATTGCAACAGCAGTATCGCGCAGCCGACAATACCATCAAGCA
GCTCAATAAGCAAATTGAGGACTTCATCACTGCAAAATGCCGCCATGAGG
AACAGCTTATGACAAACTTTACTCAGGTTCTAAATCAGAAGAAGCTCAAA
ATCCGCAATCAACAACGCTTGTTGGCTTCGGCGAAAATTGATGTGGACGA
TGCTGGTCAATGTCGGGCTGCCTCATCAAAAGTTGGGGCCCGTGTCGGGA
GCATGAAGCATGCGAAACGTCCTATTGTGGAAACGAGCGATGACGAGGCT
GAAAGCGATAATGGCTCGGAGAGTTTGGATCAGACCAAGCATCAATCCAG
TCCAAGAAGAATGATAGACACGGATGACGAACCAAATTCGACTCCGCAGC
CATTGGAGGATGTGGGTGTAGATGATACCACTGACGAAGATTTGCCCACA
GCGTCCGGCGTCGATCAGGGAATAAGTGAACAGAACAATATGGAAGAAGC
TCACCATCCACCTAGGCTGCAAGAACAGTCACCTCCACCCCGCAGGGAGC
TTCCATTCGCCAAAGGGTCAAAATCAAGCAAAGACACCGTACAGAATATA
CAGCATCAGCACGACACTGCCGAAGAAACTGCAGGCGAGACAGACGACGA
TGAGCTATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006310DNA recombination
GO:0006302double-strand break repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_7580ATCC64974_7580Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_7580-T1.exon1ATCC64974_7580-T1.exon1Aspergillus niger N402exon
ATCC64974_7580-T1.exon2ATCC64974_7580-T1.exon2Aspergillus niger N402exon
ATCC64974_7580-T1.exon3ATCC64974_7580-T1.exon3Aspergillus niger N402exon
ATCC64974_7580-T1.exon4ATCC64974_7580-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_7580-T1.cdsATCC64974_7580-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_7580-T1ATCC64974_7580-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR010585
DBxrefPFAM:PF06632
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:63772..65095 +
Powered by Drupal