You are here

Home

ATCC64974_76550-T1, ATCC64974_76550-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_76550-T1
Unique NameATCC64974_76550-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:939276..939925+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_76550-T1 ID=ATCC64974_76550-T1|Name=ATCC64974_76550-T1|organism=Aspergillus niger N402|type=mRNA|length=650bp|location=Sequence derived from alignment at OGUI01000013.1:939276..939925+ (Aspergillus niger N402)
ATGCTCCTACGACTCGCAGAGAGGCGCATCGGCGCTTCTCGACTATGCGT
AAATCATCGCGGAATGCTCCCTCCCCGGCGCAACTTGATCCCCGCACCAC
AGGCGAACTCGGGCCCTCTTATGGAAAGACGGGCGGACAGAGCTCTACCC
AATGTTCAAAGCGAGAGGCGATGGCTACGAACCTTGCCCATCTTTGCTGT
TGTCGTGGGGGCCGCTATGCTGGGTATATTCAACTACCAGAAATCTTCCT
CCAGTGTGGTTAACAGTACGCTGTATGCGCTGAGGACTTCTCCGCAGGCG
AGGGAGGTTCTGGGTGATGAGATTTACTTTGCTCAGAAGATCCCGTGGAT
TAGTGGAGAGATGAACCAGCTTCATGGTCGCATTGATATTTCATTCTGGG
TTAAGGGTACCAAGGCCCAGGGTAAAATGCGGTTTCGCAGTATTAGACCT
GACCGGACTAGCTTTGTTCGTCTACCCCATAACCTTTCTTTCTGACCTAA
GTCTTTGCTTTTGGTTTTTCAAAGGTTCAAGAACACCTACTAACGTTCGT
TCTATAGTTCCGCACGGAAGTATGGAGCTTGGAAACCGAGGATGGCACGG
TTATCCAGCTACTTGACAAAGATACCGATCCCTTCAATCAGACCAATTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000013.1:939276..939925+

>ATCC64974_76550-T1 ID=ATCC64974_76550-T1|Name=ATCC64974_76550-T1|organism=Aspergillus niger N402|type=CDS|length=1116bp|location=Sequence derived from alignment at OGUI01000013.1:939276..939925+ (Aspergillus niger N402)
ATGCTCCTACGACTCGCAGAGAGGCGCATCGGCGCTTCTCGACTATGCGT
AAATCATCGCGGAATGCTCCCTCCCCGGCGCAACTTGATCCCCGCACCAC
AGGCGAACTCGGGCCCTCTTATGGAAAGACGGGCGGACAGAGCTCTACCC
AATGTTCAAAGCGAGAGGCGATGGCTACGAACCTTGCCCATCTTTGCTGT
TGTCGTGGGGGCCGCTATGCTGGGTATATTCAACTACCAGAAATCTTCCT
CCAGTGTGGTTAACAGTACGCTGTATGCGCTGAGGACTTCTCCGCAGGCG
AGGGAGGTTCTGGGTGATGAGATTTACTTTGCTCAGAAGATCCCGTGGAT
TAGTGGAGAGATGAACCAGCTTCATGGTCGCATTGATATTTCATTCTGGG
TTAAGGGTACCAAGGCCCAGGGTAAAATGCGGTTTCGCAGTATTAGACCT
GACCGGACTAGCTTTTTCCGCACGGAAGTATGGAGCTTGGAAACCGAGGA
TGGCACGGTTATCCAGCTACTTGACAAAGATACCGATCCCTTCAATCAGA
CCAATTGAATGCTCCTACGACTCGCAGAGAGGCGCATCGGCGCTTCTCGA
CTATGCGTAAATCATCGCGGAATGCTCCCTCCCCGGCGCAACTTGATCCC
CGCACCACAGGCGAACTCGGGCCCTCTTATGGAAAGACGGGCGGACAGAG
CTCTACCCAATGTTCAAAGCGAGAGGCGATGGCTACGAACCTTGCCCATC
TTTGCTGTTGTCGTGGGGGCCGCTATGCTGGGTATATTCAACTACCAGAA
ATCTTCCTCCAGTGTGGTTAACAGTACGCTGTATGCGCTGAGGACTTCTC
CGCAGGCGAGGGAGGTTCTGGGTGATGAGATTTACTTTGCTCAGAAGATC
CCGTGGATTAGTGGAGAGATGAACCAGCTTCATGGTCGCATTGATATTTC
ATTCTGGGTTAAGGGTACCAAGGCCCAGGGTAAAATGCGGTTTCGCAGTA
TTAGACCTGACCGGACTAGCTTTTTCCGCACGGAAGTATGGAGCTTGGAA
ACCGAGGATGGCACGGTTATCCAGCTACTTGACAAAGATACCGATCCCTT
CAATCAGACCAATTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_76550ATCC64974_76550Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_76550-T1.exon1ATCC64974_76550-T1.exon1Aspergillus niger N402exon
ATCC64974_76550-T1.exon2ATCC64974_76550-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_76550-T1.cdsATCC64974_76550-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_76550-T1ATCC64974_76550-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265LIB
DBxrefInterPro:IPR014807
DBxrefPFAM:PF08695
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:939276..939925 +
Powered by Drupal