You are here

Home

ATCC64974_77210-T1, ATCC64974_77210-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_77210-T1
Unique NameATCC64974_77210-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1196076..1197449-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_77210-T1 ID=ATCC64974_77210-T1|Name=ATCC64974_77210-T1|organism=Aspergillus niger N402|type=mRNA|length=1374bp|location=Sequence derived from alignment at OGUI01000013.1:1196076..1197449- (Aspergillus niger N402)
ATGAATCCTGGACTCGATACTCTTCGTCACAAGCTCGAACAGACATTGGC
TCTCCGGCGCAAGAAAGGGCGTCTGATCGAGCCGCCTTCGCCGGCAAAGC
TGGACGGCTTGATTGATTTCAGCTCTAATGACTCGCTGTCTCTCACTACT
CCCGGGATTCTGACCGAGGCTTTCCTGAAACAGCTCGAGATGCATTCTGC
GTTCACCATCGGAAGTACCTCGTCGCGGATTTTGGACGGTACCAAGCAGT
ACCTGATTGACCTCGAACGGGACATAGCCAAGTTCCACCGTGCCAAAACA
GCCATGTTTTTCAATTCGGGCTATGATGCCAACGTGGCGCTCTGGTCCAC
GATTCCTCAGCCCGGTGACTTCATTCTGTATGATGAGTATGCGCATGCGA
GCATCCACGATGGGATGCGCCGTGGTCGGGCGACCACTCTGTCTTTCAAA
CACAACGATTGCCAGGCCTTCAAATTGTGTTTGGAGAAGATTCGAACCGA
GAACTCGGGAATAGCAGAGGGACGTCAGGTGGTATTCGTCGCTCTCGAAT
CCTTCTACAGCATGGATGGGGACTCCGCTCCCGTTGTCGAGCTGCTCGAG
GTGGCGCACAAGGCACTCCCCCGGAAGAACTTTATATTTTCGATGGACGA
GGCGCATTCCAATGGGATCATGGGACCGAATGGCTCTGGGTTTGTGTGTC
ACTACGGATTGGAGGAGCATTCCCCCATCCGGCTTCAAACATGTGGCAAG
GCGCTGGGGTCCACGGGTGGTGAGTGCCTAGCATCTCCTGTAATCAGTTA
TCTTTCTGACAGGGATAGCTGCTCTTTTGTGCAACGAGACCATCAAATCT
GTTCTCATCAACTATGCCCGAGGGATTATCTTCAGTACGGCACCGAGTTT
CCTCAGTGTGGCTGCGGTGCGAGCAGGATACGACATCATAGGCAGTAAAG
AAGGCGAAGATGTGGGTATAAGTTCCCTCGGGGATCACCATCTACTAACA
GTAAGCAGCGTCGAAAACGCCTTCAAAGCAATGTGTACCGCTTCTACACA
CAATTGACATCGCATCCAGATTGGCCGCAGATCAAACGCAAGGGCACTTT
CTACCTCCCAACCGAACATACTTGGTATTTGGGGCCATTCCAGTCTCCAA
TCGTACCTCTGGTTCCTCAGCATGACCTCGCAGTTAACCTGGAAAAGTAC
TTGGAGCAGGCCAAATACAGGGTGATTACCGTGCATTACCCTATTGTTCC
AGACAGGACGGGTCGCGTTCGAATTGTTTTGCATGCAGATCATACTCCGC
AGCAGATTGATCATGTTGTGGAACTTATCATGCAGTGGGCAAATAAGCAG
GGGGCAAGAGGGGCTCATTTGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000013.1:1196076..1197449-

>ATCC64974_77210-T1 ID=ATCC64974_77210-T1|Name=ATCC64974_77210-T1|organism=Aspergillus niger N402|type=CDS|length=3834bp|location=Sequence derived from alignment at OGUI01000013.1:1196076..1197449- (Aspergillus niger N402)
CGTCGAAAACGCCTTCAAAGCAATGTGTACCGCTTCTACACACAATTGAC
ATCGCATCCAGATTGGCCGCAGATCAAACGCAAGGGCACTTTCTACCTCC
CAACCGAACATACTTGGTATTTGGGGCCATTCCAGTCTCCAATCGTACCT
CTGGTTCCTCAGCATGACCTCGCAGTTAACCTGGAAAAGTACTTGGAGCA
GGCCAAATACAGGGTGATTACCGTGCATTACCCTATTGTTCCAGACAGGA
CGGGTCGCGTTCGAATTGTTTTGCATGCAGATCATACTCCGCAGCAGATT
GATCATGTTGTGGAACTTATCATGCAGTGGGCAAATAAGCAGGGGGCAAG
AGGGGCTCATTTGTGACTGCTCTTTTGTGCAACGAGACCATCAAATCTGT
TCTCATCAACTATGCCCGAGGGATTATCTTCAGTACGGCACCGAGTTTCC
TCAGTGTGGCTGCGGTGCGAGCAGGATACGACATCATAGGCAGTAAAGAA
GGCGAAGATATGAATCCTGGACTCGATACTCTTCGTCACAAGCTCGAACA
GACATTGGCTCTCCGGCGCAAGAAAGGGCGTCTGATCGAGCCGCCTTCGC
CGGCAAAGCTGGACGGCTTGATTGATTTCAGCTCTAATGACTCGCTGTCT
CTCACTACTCCCGGGATTCTGACCGAGGCTTTCCTGAAACAGCTCGAGAT
GCATTCTGCGTTCACCATCGGAAGTACCTCGTCGCGGATTTTGGACGGTA
CCAAGCAGTACCTGATTGACCTCGAACGGGACATAGCCAAGTTCCACCGT
GCCAAAACAGCCATGTTTTTCAATTCGGGCTATGATGCCAACGTGGCGCT
CTGGTCCACGATTCCTCAGCCCGGTGACTTCATTCTGTATGATGAGTATG
CGCATGCGAGCATCCACGATGGGATGCGCCGTGGTCGGGCGACCACTCTG
TCTTTCAAACACAACGATTGCCAGGCCTTCAAATTGTGTTTGGAGAAGAT
TCGAACCGAGAACTCGGGAATAGCAGAGGGACGTCAGGTGGTATTCGTCG
CTCTCGAATCCTTCTACAGCATGGATGGGGACTCCGCTCCCGTTGTCGAG
CTGCTCGAGGTGGCGCACAAGGCACTCCCCCGGAAGAACTTTATATTTTC
GATGGACGAGGCGCATTCCAATGGGATCATGGGACCGAATGGCTCTGGGT
TTGTGTGTCACTACGGATTGGAGGAGCATTCCCCCATCCGGCTTCAAACA
TGTGGCAAGGCGCTGGGGTCCACGGGTGCGTCGAAAACGCCTTCAAAGCA
ATGTGTACCGCTTCTACACACAATTGACATCGCATCCAGATTGGCCGCAG
ATCAAACGCAAGGGCACTTTCTACCTCCCAACCGAACATACTTGGTATTT
GGGGCCATTCCAGTCTCCAATCGTACCTCTGGTTCCTCAGCATGACCTCG
CAGTTAACCTGGAAAAGTACTTGGAGCAGGCCAAATACAGGGTGATTACC
GTGCATTACCCTATTGTTCCAGACAGGACGGGTCGCGTTCGAATTGTTTT
GCATGCAGATCATACTCCGCAGCAGATTGATCATGTTGTGGAACTTATCA
TGCAGTGGGCAAATAAGCAGGGGGCAAGAGGGGCTCATTTGTGACTGCTC
TTTTGTGCAACGAGACCATCAAATCTGTTCTCATCAACTATGCCCGAGGG
ATTATCTTCAGTACGGCACCGAGTTTCCTCAGTGTGGCTGCGGTGCGAGC
AGGATACGACATCATAGGCAGTAAAGAAGGCGAAGATATGAATCCTGGAC
TCGATACTCTTCGTCACAAGCTCGAACAGACATTGGCTCTCCGGCGCAAG
AAAGGGCGTCTGATCGAGCCGCCTTCGCCGGCAAAGCTGGACGGCTTGAT
TGATTTCAGCTCTAATGACTCGCTGTCTCTCACTACTCCCGGGATTCTGA
CCGAGGCTTTCCTGAAACAGCTCGAGATGCATTCTGCGTTCACCATCGGA
AGTACCTCGTCGCGGATTTTGGACGGTACCAAGCAGTACCTGATTGACCT
CGAACGGGACATAGCCAAGTTCCACCGTGCCAAAACAGCCATGTTTTTCA
ATTCGGGCTATGATGCCAACGTGGCGCTCTGGTCCACGATTCCTCAGCCC
GGTGACTTCATTCTGTATGATGAGTATGCGCATGCGAGCATCCACGATGG
GATGCGCCGTGGTCGGGCGACCACTCTGTCTTTCAAACACAACGATTGCC
AGGCCTTCAAATTGTGTTTGGAGAAGATTCGAACCGAGAACTCGGGAATA
GCAGAGGGACGTCAGGTGGTATTCGTCGCTCTCGAATCCTTCTACAGCAT
GGATGGGGACTCCGCTCCCGTTGTCGAGCTGCTCGAGGTGGCGCACAAGG
CACTCCCCCGGAAGAACTTTATATTTTCGATGGACGAGGCGCATTCCAAT
GGGATCATGGGACCGAATGGCTCTGGGTTTGTGTGTCACTACGGATTGGA
GGAGCATTCCCCCATCCGGCTTCAAACATGTGGCAAGGCGCTGGGGTCCA
CGGGTGCGTCGAAAACGCCTTCAAAGCAATGTGTACCGCTTCTACACACA
ATTGACATCGCATCCAGATTGGCCGCAGATCAAACGCAAGGGCACTTTCT
ACCTCCCAACCGAACATACTTGGTATTTGGGGCCATTCCAGTCTCCAATC
GTACCTCTGGTTCCTCAGCATGACCTCGCAGTTAACCTGGAAAAGTACTT
GGAGCAGGCCAAATACAGGGTGATTACCGTGCATTACCCTATTGTTCCAG
ACAGGACGGGTCGCGTTCGAATTGTTTTGCATGCAGATCATACTCCGCAG
CAGATTGATCATGTTGTGGAACTTATCATGCAGTGGGCAAATAAGCAGGG
GGCAAGAGGGGCTCATTTGTGACTGCTCTTTTGTGCAACGAGACCATCAA
ATCTGTTCTCATCAACTATGCCCGAGGGATTATCTTCAGTACGGCACCGA
GTTTCCTCAGTGTGGCTGCGGTGCGAGCAGGATACGACATCATAGGCAGT
AAAGAAGGCGAAGATATGAATCCTGGACTCGATACTCTTCGTCACAAGCT
CGAACAGACATTGGCTCTCCGGCGCAAGAAAGGGCGTCTGATCGAGCCGC
CTTCGCCGGCAAAGCTGGACGGCTTGATTGATTTCAGCTCTAATGACTCG
CTGTCTCTCACTACTCCCGGGATTCTGACCGAGGCTTTCCTGAAACAGCT
CGAGATGCATTCTGCGTTCACCATCGGAAGTACCTCGTCGCGGATTTTGG
ACGGTACCAAGCAGTACCTGATTGACCTCGAACGGGACATAGCCAAGTTC
CACCGTGCCAAAACAGCCATGTTTTTCAATTCGGGCTATGATGCCAACGT
GGCGCTCTGGTCCACGATTCCTCAGCCCGGTGACTTCATTCTGTATGATG
AGTATGCGCATGCGAGCATCCACGATGGGATGCGCCGTGGTCGGGCGACC
ACTCTGTCTTTCAAACACAACGATTGCCAGGCCTTCAAATTGTGTTTGGA
GAAGATTCGAACCGAGAACTCGGGAATAGCAGAGGGACGTCAGGTGGTAT
TCGTCGCTCTCGAATCCTTCTACAGCATGGATGGGGACTCCGCTCCCGTT
GTCGAGCTGCTCGAGGTGGCGCACAAGGCACTCCCCCGGAAGAACTTTAT
ATTTTCGATGGACGAGGCGCATTCCAATGGGATCATGGGACCGAATGGCT
CTGGGTTTGTGTGTCACTACGGATTGGAGGAGCATTCCCCCATCCGGCTT
CAAACATGTGGCAAGGCGCTGGGGTCCACGGGTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_77210ATCC64974_77210Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77210-T1ATCC64974_77210-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77210-T1.cdsATCC64974_77210-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77210-T1.exon3ATCC64974_77210-T1.exon3Aspergillus niger N402exon
ATCC64974_77210-T1.exon2ATCC64974_77210-T1.exon2Aspergillus niger N402exon
ATCC64974_77210-T1.exon1ATCC64974_77210-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000131.7
NoteSMCOG1109:8-amino-7-oxononanoate synthase
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR004839
DBxrefInterPro:IPR015422
DBxrefInterPro:IPR015421
DBxrefPFAM:PF00155
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1196076..1197449 -
Powered by Drupal