You are here

Home

ATCC64974_77920-T1, ATCC64974_77920-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_77920-T1
Unique NameATCC64974_77920-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1415585..1417489+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_77920-T1 ID=ATCC64974_77920-T1|Name=ATCC64974_77920-T1|organism=Aspergillus niger N402|type=mRNA|length=1905bp|location=Sequence derived from alignment at OGUI01000013.1:1415585..1417489+ (Aspergillus niger N402)
ATGTCGAAGAGACAAGCTGAGCTGTCGCTCGAGGAAGAGCTCGCAGCAGG
CTCTCCCGCCTCGAAGAAAGCGCGTGTGGAGGACGAAGAGCTGCCGGAGG
ACGACCCGCGCCGTGGAGCTTTGCCGATTCGCCGGGCGACTGGACAGCAA
CTTGAAGAACATGAGCGCAGCGGACAAGATATTCTTGCAGCTGCTGATCA
GGAAGGCGAAGAGCTAGCGGAAGCAGCGCAAGATGGAGGCCCCGAATCGT
CCGATATTGATGCTGATGACGACAAACCGGTTATCGCGGCCCCGAAACGT
CAGAGCGCCCCCATGGAGGGCTACAGCGACCTGTACCTCGATACGATCAA
TCGCGAAATCCTCGACTTCGATTTTGAAAAGCTATGCTCGGTCAGCTTGT
CGAATATTAATGTGTACGCTTGTCTGGTGTGCGGCAAATACTTCCAGGGC
AGAGGACCGAAGTCGCATGCTTATTTCCATGCGCTTGAGGTCGGACACCA
TGTTTTCGTCAATATGGGTACTAAAAAGGTCTACGTTCTCCCGGAAGGCT
ATGAGGTTAAGAACCAGAGCTTGGACGATATCAAATACGTGGTGGACCCG
TACTACAGCAAGGATGAGGTGATGAAGCTGGACAAGGAAGTACACGACGC
ATTCGACCTGGCAGGAAACCGTTATAGGCCTGGTAAGACACTCAGACTGT
TTATATTGCTAAAGACAATGTGCTAATCATTTGCAGGTTTTGTTGGCATG
AATAACATCAAAGCCAACGATTATCTGAACGTGGTGGTCCAGCTCTTAGC
TCACGTCTTCCCCATTCGCAATTACTTCCTGCTGCATGAATTCCCTCAAC
CAGGAACGCCTCAATTAGCACTCCGCTTCAGTACCCTAGTCCGAAAACTA
TGGAACCCTAAGGCATTTCGCTCCCATGTATCTCCGCACGAACTGTTGCA
GGAGATCGCTCTCCGCTCATCCAAGCGCTTTACCCTCACACAGCAGTCCG
ATCCAGTGGAGTTCATGTCGTGGTTCTTGAACAACCTCCACCTCTCTCTC
GGAGGCTCCAAGAAACCATCCAAGGCACCTACAAGCGTTGTACAAGCCGC
ATTCCAGGGTCACTTGAGGATCGAAAGCCAGGCTATCACAGCCCATTCAG
ATACCCAAAACGCGCGTCTAGTTTTCACCGAATCCGGCTCCATCAACAGC
CAAACGACACCCTTCCTCATCCTCACCTTAGACCTACCACCCACGCCCCT
CTTCCAATCCGCGAACCGGGAATCTATCATCCCGCAAGTCCCTCTGACTA
CCCTCCTGAACAAGTACAACGGAATCACCGCCTCCGAAAAACTCGCCCAC
AGAGTCCGCCACAGGCTCCTCCACCCCCTTCCTCCCTACCTCCTCTTCCA
CATCAAGCGCTTCAGCAAGAACCGCTTCGTCTCCGAACGTAACCCCACAA
TCGTGACCTTCCCATCCCCTCGCTCATTAGACATGTCGCCCTATGTTGAG
CCAAACCCAGAGATCTGGCCTCCAGGGGAACCGATCCTCTACGATCTTGT
CGCAAACATCATCCTCGACCCTACTGTCGCCGCTCCAGGTGCTCACGAGG
AAGCCGCAGCAGACAAAGGAGTCAATGCTGCTAGCGGAAAAGCTTCGTCA
GGAGCTGGAGCTGGCAGCGAGAAAGTCTCCTGGCTTGTTCAGTTGCATGA
TAAAGCTATGTCTGCGGAGAATGGTCGGCTTCAGAAAGAACATGCTGGCG
AGCAGCGTGGACCCGAGTGGCTGGAGATTCAGGATCTGTTTGTCAAGCGA
GCAGAAAGCGAAACTTTGTTCACGAAGGAAGGGTACTTGATGGTATGGGA
ACGTCGAAAGGTTCCTGGCGTGCCGAATCGTAAGGGGAAGAATCCGGCTA
AGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000013.1:1415585..1417489+

>ATCC64974_77920-T1 ID=ATCC64974_77920-T1|Name=ATCC64974_77920-T1|organism=Aspergillus niger N402|type=CDS|length=3702bp|location=Sequence derived from alignment at OGUI01000013.1:1415585..1417489+ (Aspergillus niger N402)
ATGTCGAAGAGACAAGCTGAGCTGTCGCTCGAGGAAGAGCTCGCAGCAGG
CTCTCCCGCCTCGAAGAAAGCGCGTGTGGAGGACGAAGAGCTGCCGGAGG
ACGACCCGCGCCGTGGAGCTTTGCCGATTCGCCGGGCGACTGGACAGCAA
CTTGAAGAACATGAGCGCAGCGGACAAGATATTCTTGCAGCTGCTGATCA
GGAAGGCGAAGAGCTAGCGGAAGCAGCGCAAGATGGAGGCCCCGAATCGT
CCGATATTGATGCTGATGACGACAAACCGGTTATCGCGGCCCCGAAACGT
CAGAGCGCCCCCATGGAGGGCTACAGCGACCTGTACCTCGATACGATCAA
TCGCGAAATCCTCGACTTCGATTTTGAAAAGCTATGCTCGGTCAGCTTGT
CGAATATTAATGTGTACGCTTGTCTGGTGTGCGGCAAATACTTCCAGGGC
AGAGGACCGAAGTCGCATGCTTATTTCCATGCGCTTGAGGTCGGACACCA
TGTTTTCGTCAATATGGGTACTAAAAAGGTCTACGTTCTCCCGGAAGGCT
ATGAGGTTAAGAACCAGAGCTTGGACGATATCAAATACGTGGTGGACCCG
TACTACAGCAAGGATGAGGTGATGAAGCTGGACAAGGAAGTACACGACGC
ATTCGACCTGGCAGGAAACCGTTATAGGCCTGGTTTTGTTGGCATGAATA
ACATCAAAGCCAACGATTATCTGAACGTGGTGGTCCAGCTCTTAGCTCAC
GTCTTCCCCATTCGCAATTACTTCCTGCTGCATGAATTCCCTCAACCAGG
AACGCCTCAATTAGCACTCCGCTTCAGTACCCTAGTCCGAAAACTATGGA
ACCCTAAGGCATTTCGCTCCCATGTATCTCCGCACGAACTGTTGCAGGAG
ATCGCTCTCCGCTCATCCAAGCGCTTTACCCTCACACAGCAGTCCGATCC
AGTGGAGTTCATGTCGTGGTTCTTGAACAACCTCCACCTCTCTCTCGGAG
GCTCCAAGAAACCATCCAAGGCACCTACAAGCGTTGTACAAGCCGCATTC
CAGGGTCACTTGAGGATCGAAAGCCAGGCTATCACAGCCCATTCAGATAC
CCAAAACGCGCGTCTAGTTTTCACCGAATCCGGCTCCATCAACAGCCAAA
CGACACCCTTCCTCATCCTCACCTTAGACCTACCACCCACGCCCCTCTTC
CAATCCGCGAACCGGGAATCTATCATCCCGCAAGTCCCTCTGACTACCCT
CCTGAACAAGTACAACGGAATCACCGCCTCCGAAAAACTCGCCCACAGAG
TCCGCCACAGGCTCCTCCACCCCCTTCCTCCCTACCTCCTCTTCCACATC
AAGCGCTTCAGCAAGAACCGCTTCGTCTCCGAACGTAACCCCACAATCGT
GACCTTCCCATCCCCTCGCTCATTAGACATGTCGCCCTATGTTGAGCCAA
ACCCAGAGATCTGGCCTCCAGGGGAACCGATCCTCTACGATCTTGTCGCA
AACATCATCCTCGACCCTACTGTCGCCGCTCCAGGTGCTCACGAGGAAGC
CGCAGCAGACAAAGGAGTCAATGCTGCTAGCGGAAAAGCTTCGTCAGGAG
CTGGAGCTGGCAGCGAGAAAGTCTCCTGGCTTGTTCAGTTGCATGATAAA
GCTATGTCTGCGGAGAATGGTCGGCTTCAGAAAGAACATGCTGGCGAGCA
GCGTGGACCCGAGTGGCTGGAGATTCAGGATCTGTTTGTCAAGCGAGCAG
AAAGCGAAACTTTGTTCACGAAGGAAGGGTACTTGATGGTATGGGAACGT
CGAAAGGTTCCTGGCGTGCCGAATCGTAAGGGGAAGAATCCGGCTAAGTG
AATGTCGAAGAGACAAGCTGAGCTGTCGCTCGAGGAAGAGCTCGCAGCAG
GCTCTCCCGCCTCGAAGAAAGCGCGTGTGGAGGACGAAGAGCTGCCGGAG
GACGACCCGCGCCGTGGAGCTTTGCCGATTCGCCGGGCGACTGGACAGCA
ACTTGAAGAACATGAGCGCAGCGGACAAGATATTCTTGCAGCTGCTGATC
AGGAAGGCGAAGAGCTAGCGGAAGCAGCGCAAGATGGAGGCCCCGAATCG
TCCGATATTGATGCTGATGACGACAAACCGGTTATCGCGGCCCCGAAACG
TCAGAGCGCCCCCATGGAGGGCTACAGCGACCTGTACCTCGATACGATCA
ATCGCGAAATCCTCGACTTCGATTTTGAAAAGCTATGCTCGGTCAGCTTG
TCGAATATTAATGTGTACGCTTGTCTGGTGTGCGGCAAATACTTCCAGGG
CAGAGGACCGAAGTCGCATGCTTATTTCCATGCGCTTGAGGTCGGACACC
ATGTTTTCGTCAATATGGGTACTAAAAAGGTCTACGTTCTCCCGGAAGGC
TATGAGGTTAAGAACCAGAGCTTGGACGATATCAAATACGTGGTGGACCC
GTACTACAGCAAGGATGAGGTGATGAAGCTGGACAAGGAAGTACACGACG
CATTCGACCTGGCAGGAAACCGTTATAGGCCTGGTTTTGTTGGCATGAAT
AACATCAAAGCCAACGATTATCTGAACGTGGTGGTCCAGCTCTTAGCTCA
CGTCTTCCCCATTCGCAATTACTTCCTGCTGCATGAATTCCCTCAACCAG
GAACGCCTCAATTAGCACTCCGCTTCAGTACCCTAGTCCGAAAACTATGG
AACCCTAAGGCATTTCGCTCCCATGTATCTCCGCACGAACTGTTGCAGGA
GATCGCTCTCCGCTCATCCAAGCGCTTTACCCTCACACAGCAGTCCGATC
CAGTGGAGTTCATGTCGTGGTTCTTGAACAACCTCCACCTCTCTCTCGGA
GGCTCCAAGAAACCATCCAAGGCACCTACAAGCGTTGTACAAGCCGCATT
CCAGGGTCACTTGAGGATCGAAAGCCAGGCTATCACAGCCCATTCAGATA
CCCAAAACGCGCGTCTAGTTTTCACCGAATCCGGCTCCATCAACAGCCAA
ACGACACCCTTCCTCATCCTCACCTTAGACCTACCACCCACGCCCCTCTT
CCAATCCGCGAACCGGGAATCTATCATCCCGCAAGTCCCTCTGACTACCC
TCCTGAACAAGTACAACGGAATCACCGCCTCCGAAAAACTCGCCCACAGA
GTCCGCCACAGGCTCCTCCACCCCCTTCCTCCCTACCTCCTCTTCCACAT
CAAGCGCTTCAGCAAGAACCGCTTCGTCTCCGAACGTAACCCCACAATCG
TGACCTTCCCATCCCCTCGCTCATTAGACATGTCGCCCTATGTTGAGCCA
AACCCAGAGATCTGGCCTCCAGGGGAACCGATCCTCTACGATCTTGTCGC
AAACATCATCCTCGACCCTACTGTCGCCGCTCCAGGTGCTCACGAGGAAG
CCGCAGCAGACAAAGGAGTCAATGCTGCTAGCGGAAAAGCTTCGTCAGGA
GCTGGAGCTGGCAGCGAGAAAGTCTCCTGGCTTGTTCAGTTGCATGATAA
AGCTATGTCTGCGGAGAATGGTCGGCTTCAGAAAGAACATGCTGGCGAGC
AGCGTGGACCCGAGTGGCTGGAGATTCAGGATCTGTTTGTCAAGCGAGCA
GAAAGCGAAACTTTGTTCACGAAGGAAGGGTACTTGATGGTATGGGAACG
TCGAAAGGTTCCTGGCGTGCCGAATCGTAAGGGGAAGAATCCGGCTAAGT
GA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000245spliceosomal complex assembly
GO:0006397mRNA processing
GO:0016579protein deubiquitination
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_77920ATCC64974_77920Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77920-T1.exon1ATCC64974_77920-T1.exon1Aspergillus niger N402exon
ATCC64974_77920-T1.exon2ATCC64974_77920-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77920-T1.cdsATCC64974_77920-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77920-T1ATCC64974_77920-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262QL6
NoteMEROPS:MER0064621
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR033809
DBxrefInterPro:IPR028889
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR001394
DBxrefInterPro:IPR001607
DBxrefPFAM:PF02148
DBxrefPFAM:PF00443
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1415585..1417489 +
Powered by Drupal