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ATCC64974_78410-T1, ATCC64974_78410-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_78410-T1
Unique NameATCC64974_78410-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1547087..1548504-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_78410-T1 ID=ATCC64974_78410-T1|Name=ATCC64974_78410-T1|organism=Aspergillus niger N402|type=mRNA|length=1418bp|location=Sequence derived from alignment at OGUI01000013.1:1547087..1548504- (Aspergillus niger N402)
ATGGTTATGGCACCGACTGCTTGTGTACCTGCTGAAGTATGCACTCCTAA
ATACTACCAGGAGAAACACGACTATAATCTCAATTGGGATCATGGTCAAT
TCAGCAATCATGGAGGGGACGATTTATCGCAATCTAGGTTGGCTGCCAAG
GAACTAGTCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGTCAATGTGGA
CAGCTGCGCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAGATATGGGGG
AGGTCTACCGCCAGCATCTGCGCTGGAAAATGAACTTGAGCCGTGTTCGG
CCTTTCTACGGTAAGGATATGAATGCACAACTGGGATTTTCATGACAGCG
GCTAACAGTGAGTCAATAGCGGTCAAGTGCAACCCCGACCCGGAGATCCT
TCGCCTCATGGCTAAACTCGGAAACGGTTTTGATTGTGCGTCCAAGGCCG
AGATCGATATGGCCCTCGAGACCGGCGTCGACCCAAGCCGCATCATCTAC
GCGCAGCCCTGCAAGACCAAGTCCTATCTGCGCTACGCCGCCCAGGTGGG
CGTCAAGCAGATGACCTTTGACAACGCCGACGAGCTGTACAAGATCAAGG
CCAACTACCCGGACGCCGAGCTTTATCTGCGCATCCTCACGGATGATTCG
AACAGCTTGTGCCAGTTCAGCATGAAATTCGGAGCTTCCTTGGACGTTGC
TCGCCAGCTCCTCGAATTGGCGCACCAGCTCGAGCTGAAGGTGGTCGGCG
TGAGTTTTCACGTCGGATCAGGCGCTGAGGATCCTAAGGCTTTCCTGAAA
GCCGTGCAGGACGCGCGCCTTGTGTTTGATCAAGCCGCAGAGATTGGCCA
CGAACTGCACACTTTGGATGTCGGCGGAGGTTTCTCCCAGGACACTTTTG
AGAAATTCGCCGGCGTCCTGAGCGAGGCGTTGGAGACCTATTTCCCGCCC
AACATCCGGGTCATTGCCGAACCGGGTCGCTACTATGTTGCCAATGCGTT
CACTCTGGCGGCCAACATCATTGCTCGCCGTGAGGTGCGCGACCCGGAGG
ACCCGGCCAACGACGCCTACATGCTGTATCTCAACGACGGGGTGTATGGA
AACTTCTCCAACATCATCTTTGACCACCAGCACCCCGTGGCCCAGGTCCT
GACCTGTGCGTCGGCCGCTAACTCCCCTTATGCTGCGACTTCGGGGGGTG
TCACGTACTCCATCTGGGGGCCGACCTGTGACGGCATTGATGTTATCTCC
AAGCGCATTGCGCTGCCAGCTCTGCTGGAAGTTGGAGATTGGCTTTACTT
CGAGGAGATGGGAGCCTACACCAAGTGTAGCGCGACCCGCTTCAACGGCT
TTTCGGACAACCACGAGGTGATCTACATCTCCAGCGAAGCCGGGGCTTCT
GCGCTCCTCGAGTATTAG
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Coding sequence (CDS) from alignment at OGUI01000013.1:1547087..1548504-

>ATCC64974_78410-T1 ID=ATCC64974_78410-T1|Name=ATCC64974_78410-T1|organism=Aspergillus niger N402|type=CDS|length=2718bp|location=Sequence derived from alignment at OGUI01000013.1:1547087..1548504- (Aspergillus niger N402)
CGGTCAAGTGCAACCCCGACCCGGAGATCCTTCGCCTCATGGCTAAACTC
GGAAACGGTTTTGATTGTGCGTCCAAGGCCGAGATCGATATGGCCCTCGA
GACCGGCGTCGACCCAAGCCGCATCATCTACGCGCAGCCCTGCAAGACCA
AGTCCTATCTGCGCTACGCCGCCCAGGTGGGCGTCAAGCAGATGACCTTT
GACAACGCCGACGAGCTGTACAAGATCAAGGCCAACTACCCGGACGCCGA
GCTTTATCTGCGCATCCTCACGGATGATTCGAACAGCTTGTGCCAGTTCA
GCATGAAATTCGGAGCTTCCTTGGACGTTGCTCGCCAGCTCCTCGAATTG
GCGCACCAGCTCGAGCTGAAGGTGGTCGGCGTGAGTTTTCACGTCGGATC
AGGCGCTGAGGATCCTAAGGCTTTCCTGAAAGCCGTGCAGGACGCGCGCC
TTGTGTTTGATCAAGCCGCAGAGATTGGCCACGAACTGCACACTTTGGAT
GTCGGCGGAGGTTTCTCCCAGGACACTTTTGAGAAATTCGCCGGCGTCCT
GAGCGAGGCGTTGGAGACCTATTTCCCGCCCAACATCCGGGTCATTGCCG
AACCGGGTCGCTACTATGTTGCCAATGCGTTCACTCTGGCGGCCAACATC
ATTGCTCGCCGTGAGGTGCGCGACCCGGAGGACCCGGCCAACGACGCCTA
CATGCTGTATCTCAACGACGGGGTGTATGGAAACTTCTCCAACATCATCT
TTGACCACCAGCACCCCGTGGCCCAGGTCCTGACCTGTGCGTCGGCCGCT
AACTCCCCTTATGCTGCGACTTCGGGGGGTGTCACGTACTCCATCTGGGG
GCCGACCTGTGACGGCATTGATGTTATCTCCAAGCGCATTGCGCTGCCAG
CTCTGCTGGAAGTTGGAGATTGGCTTTACTTCGAGGAGATGGGAGCCTAC
ACCAAGTGTAGCGCGACCCGCTTCAACGGCTTTTCGGACAACCACGAGGT
GATCTACATCTCCAGCGAAGCCGGGGCTTCTGCGCTCCTCGAGTATTAGA
TGGTTATGGCACCGACTGCTTGTGTACCTGCTGAAGTATGCACTCCTAAA
TACTACCAGGAGAAACACGACTATAATCTCAATTGGGATCATGGTCAATT
CAGCAATCATGGAGGGGACGATTTATCGCAATCTAGGTTGGCTGCCAAGG
AACTAGTCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGTCAATGTGGAC
AGCTGCGCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAGATATGGGGGA
GGTCTACCGCCAGCATCTGCGCTGGAAAATGAACTTGAGCCGTGTTCGGC
CTTTCTACGCGGTCAAGTGCAACCCCGACCCGGAGATCCTTCGCCTCATG
GCTAAACTCGGAAACGGTTTTGATTGTGCGTCCAAGGCCGAGATCGATAT
GGCCCTCGAGACCGGCGTCGACCCAAGCCGCATCATCTACGCGCAGCCCT
GCAAGACCAAGTCCTATCTGCGCTACGCCGCCCAGGTGGGCGTCAAGCAG
ATGACCTTTGACAACGCCGACGAGCTGTACAAGATCAAGGCCAACTACCC
GGACGCCGAGCTTTATCTGCGCATCCTCACGGATGATTCGAACAGCTTGT
GCCAGTTCAGCATGAAATTCGGAGCTTCCTTGGACGTTGCTCGCCAGCTC
CTCGAATTGGCGCACCAGCTCGAGCTGAAGGTGGTCGGCGTGAGTTTTCA
CGTCGGATCAGGCGCTGAGGATCCTAAGGCTTTCCTGAAAGCCGTGCAGG
ACGCGCGCCTTGTGTTTGATCAAGCCGCAGAGATTGGCCACGAACTGCAC
ACTTTGGATGTCGGCGGAGGTTTCTCCCAGGACACTTTTGAGAAATTCGC
CGGCGTCCTGAGCGAGGCGTTGGAGACCTATTTCCCGCCCAACATCCGGG
TCATTGCCGAACCGGGTCGCTACTATGTTGCCAATGCGTTCACTCTGGCG
GCCAACATCATTGCTCGCCGTGAGGTGCGCGACCCGGAGGACCCGGCCAA
CGACGCCTACATGCTGTATCTCAACGACGGGGTGTATGGAAACTTCTCCA
ACATCATCTTTGACCACCAGCACCCCGTGGCCCAGGTCCTGACCTGTGCG
TCGGCCGCTAACTCCCCTTATGCTGCGACTTCGGGGGGTGTCACGTACTC
CATCTGGGGGCCGACCTGTGACGGCATTGATGTTATCTCCAAGCGCATTG
CGCTGCCAGCTCTGCTGGAAGTTGGAGATTGGCTTTACTTCGAGGAGATG
GGAGCCTACACCAAGTGTAGCGCGACCCGCTTCAACGGCTTTTCGGACAA
CCACGAGGTGATCTACATCTCCAGCGAAGCCGGGGCTTCTGCGCTCCTCG
AGTATTAGATGGTTATGGCACCGACTGCTTGTGTACCTGCTGAAGTATGC
ACTCCTAAATACTACCAGGAGAAACACGACTATAATCTCAATTGGGATCA
TGGTCAATTCAGCAATCATGGAGGGGACGATTTATCGCAATCTAGGTTGG
CTGCCAAGGAACTAGTCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGTC
AATGTGGACAGCTGCGCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAGA
TATGGGGGAGGTCTACCGCCAGCATCTGCGCTGGAAAATGAACTTGAGCC
GTGTTCGGCCTTTCTACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006596polyamine biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPE1ATCC64974_78410Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78410-T1ATCC64974_78410-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78410-T1.cdsATCC64974_78410-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78410-T1.exon2ATCC64974_78410-T1.exon2Aspergillus niger N402exon
ATCC64974_78410-T1.exon1ATCC64974_78410-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09261V03
DBxrefInterPro:IPR022657
DBxrefInterPro:IPR022653
DBxrefInterPro:IPR029066
DBxrefInterPro:IPR009006
DBxrefInterPro:IPR022644
DBxrefInterPro:IPR022643
DBxrefInterPro:IPR000183
DBxrefInterPro:IPR002433
DBxrefPFAM:PF00278
DBxrefPFAM:PF02784
ProductOrnithine decarboxylase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1547087..1548504 -
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