You are here

Home

ATCC64974_78570-T1, ATCC64974_78570-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_78570-T1
Unique NameATCC64974_78570-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1586389..1586915+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_78570-T1 ID=ATCC64974_78570-T1|Name=ATCC64974_78570-T1|organism=Aspergillus niger N402|type=mRNA|length=527bp|location=Sequence derived from alignment at OGUI01000013.1:1586389..1586915+ (Aspergillus niger N402)
ATGCTGTCTTTCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCTCCGTCA
AATTCTCCCCTCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGCGCCCTT
TTTCGCAAATCGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTTTTGCGC
TCTGGAAAGCAGACCAACAATGTCGGAGTTGCTAGTGTGGGGTCAACATT
GAGACAGGTTGAGCAGGTTCGGGGAATGAAGACTCGCTCATCGGTGAAGC
GGTTGTGTGATGGCTGCAAGGTATGCCATGATCTAGTTGGATTGGATTTA
TTCTCTTTTGTTGGAGAAGTTAGCTTTAGCAGGAGTTTGCGTTTTATCTG
TCGGAACGATGCTAATACAGTGAAAATGCAGCCTGTGCGGAGAAAAAACC
GCGTCTACATTATCTGGTAAGATCACATCGATGCAAGCTGCAAGTGCACT
ATAGCATGATCGCTGACATCTTCGTTCTGCAAAATAGCTCCAAGAACCCG
AAGCACAAGCAGCGCCAAGGGAAATAG
back to top

Coding sequence (CDS) from alignment at OGUI01000013.1:1586389..1586915+

>ATCC64974_78570-T1 ID=ATCC64974_78570-T1|Name=ATCC64974_78570-T1|organism=Aspergillus niger N402|type=CDS|length=1035bp|location=Sequence derived from alignment at OGUI01000013.1:1586389..1586915+ (Aspergillus niger N402)
ATGCTGTCTTTCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCTCCGTCA
AATTCTCCCCTCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGCGCCCTT
TTTCGCAAATCGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTTTTGCGC
TCTGGAAAGCAGACCAACAATGTCGGAGTTGCTAGTGTGGGGTCAACATT
GAGACAGGTTGAGCAGGTTCGGGGAATGAAGACTCGCTCATCGGTGAAGC
GGTTGTGTGATGGCTGCAAGCCTGTGCGGAGAAAAAACCGCGTCTACATT
ATCTGCTCCAAGAACCCGAAGCACAAGCAGCGCCAAGGGAAATAGATGCT
GTCTTTCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCTCCGTCAAATTC
TCCCCTCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGCGCCCTTTTTCG
CAAATCGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTTTTGCGCTCTGG
AAAGCAGACCAACAATGTCGGAGTTGCTAGTGTGGGGTCAACATTGAGAC
AGGTTGAGCAGGTTCGGGGAATGAAGACTCGCTCATCGGTGAAGCGGTTG
TGTGATGGCTGCAAGCCTGTGCGGAGAAAAAACCGCGTCTACATTATCTG
CTCCAAGAACCCGAAGCACAAGCAGCGCCAAGGGAAATAGATGCTGTCTT
TCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCTCCGTCAAATTCTCCCC
TCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGCGCCCTTTTTCGCAAAT
CGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTTTTGCGCTCTGGAAAGC
AGACCAACAATGTCGGAGTTGCTAGTGTGGGGTCAACATTGAGACAGGTT
GAGCAGGTTCGGGGAATGAAGACTCGCTCATCGGTGAAGCGGTTGTGTGA
TGGCTGCAAGCCTGTGCGGAGAAAAAACCGCGTCTACATTATCTGCTCCA
AGAACCCGAAGCACAAGCAGCGCCAAGGGAAATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_78570ATCC64974_78570Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78570-T1.exon1ATCC64974_78570-T1.exon1Aspergillus niger N402exon
ATCC64974_78570-T1.exon2ATCC64974_78570-T1.exon2Aspergillus niger N402exon
ATCC64974_78570-T1.exon3ATCC64974_78570-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78570-T1.cdsATCC64974_78570-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78570-T1ATCC64974_78570-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035977
DBxrefInterPro:IPR000473
DBxrefPFAM:PF00444
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1586389..1586915 +
Powered by Drupal