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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000013.1:1586389..1586915+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_78570-T1 ID=ATCC64974_78570-T1|Name=ATCC64974_78570-T1|organism=Aspergillus niger N402|type=mRNA|length=527bp|location=Sequence derived from alignment at OGUI01000013.1:1586389..1586915+ (Aspergillus niger N402)
ATGCTGTCTTTCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCTCCGTCA
AATTCTCCCCTCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGCGCCCTT
TTTCGCAAATCGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTTTTGCGC
TCTGGAAAGCAGACCAACAATGTCGGAGTTGCTAGTGTGGGGTCAACATT
GAGACAGGTTGAGCAGGTTCGGGGAATGAAGACTCGCTCATCGGTGAAGC
GGTTGTGTGATGGCTGCAAGGTATGCCATGATCTAGTTGGATTGGATTTA
TTCTCTTTTGTTGGAGAAGTTAGCTTTAGCAGGAGTTTGCGTTTTATCTG
TCGGAACGATGCTAATACAGTGAAAATGCAGCCTGTGCGGAGAAAAAACC
GCGTCTACATTATCTGGTAAGATCACATCGATGCAAGCTGCAAGTGCACT
ATAGCATGATCGCTGACATCTTCGTTCTGCAAAATAGCTCCAAGAACCCG
AAGCACAAGCAGCGCCAAGGGAAATAG back to topCoding sequence (CDS) from alignment at OGUI01000013.1:1586389..1586915+ >ATCC64974_78570-T1 ID=ATCC64974_78570-T1|Name=ATCC64974_78570-T1|organism=Aspergillus niger N402|type=CDS|length=1035bp|location=Sequence derived from alignment at OGUI01000013.1:1586389..1586915+ (Aspergillus niger N402)
ATGCTGTCTTTCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCTCCGTCA
AATTCTCCCCTCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGCGCCCTT
TTTCGCAAATCGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTTTTGCGC
TCTGGAAAGCAGACCAACAATGTCGGAGTTGCTAGTGTGGGGTCAACATT
GAGACAGGTTGAGCAGGTTCGGGGAATGAAGACTCGCTCATCGGTGAAGC
GGTTGTGTGATGGCTGCAAGCCTGTGCGGAGAAAAAACCGCGTCTACATT
ATCTGCTCCAAGAACCCGAAGCACAAGCAGCGCCAAGGGAAATAGATGCT
GTCTTTCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCTCCGTCAAATTC
TCCCCTCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGCGCCCTTTTTCG
CAAATCGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTTTTGCGCTCTGG
AAAGCAGACCAACAATGTCGGAGTTGCTAGTGTGGGGTCAACATTGAGAC
AGGTTGAGCAGGTTCGGGGAATGAAGACTCGCTCATCGGTGAAGCGGTTG
TGTGATGGCTGCAAGCCTGTGCGGAGAAAAAACCGCGTCTACATTATCTG
CTCCAAGAACCCGAAGCACAAGCAGCGCCAAGGGAAATAGATGCTGTCTT
TCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCTCCGTCAAATTCTCCCC
TCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGCGCCCTTTTTCGCAAAT
CGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTTTTGCGCTCTGGAAAGC
AGACCAACAATGTCGGAGTTGCTAGTGTGGGGTCAACATTGAGACAGGTT
GAGCAGGTTCGGGGAATGAAGACTCGCTCATCGGTGAAGCGGTTGTGTGA
TGGCTGCAAGCCTGTGCGGAGAAAAAACCGCGTCTACATTATCTGCTCCA
AGAACCCGAAGCACAAGCAGCGCCAAGGGAAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_78570-T1 | ATCC64974_78570-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035977 |
| DBxref | InterPro:IPR000473 |
| DBxref | PFAM:PF00444 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000013.1 | supercontig | OGUI01000013.1:1586389..1586915 + |
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