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ATCC64974_79050-T1, ATCC64974_79050-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_79050-T1
Unique NameATCC64974_79050-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1706809..1707692-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_79050-T1 ID=ATCC64974_79050-T1|Name=ATCC64974_79050-T1|organism=Aspergillus niger N402|type=mRNA|length=884bp|location=Sequence derived from alignment at OGUI01000013.1:1706809..1707692- (Aspergillus niger N402)
ATGTCCTCCCTCAACCAAGACCAAATCAAAACCCTCGAACAATCCCGCCA
ACGCCTCATCCAACTCACCCATTCCCTCGCCTCTCTCATAACCAGTCTCA
ATCAAAGCGATCCTCTCCCCTCCTGGTATATATACCCCCCCAATGCCCAC
TCCATCCAGCCCACCCGGGTCAACCTTACTGATATGATGATACGGACAGG
ACATCCCTCCAATCCCAAGCAACCATCATCTCCAACAACCTCCTCACCAT
CTCCGACCACCTCTCCGATAACCGCGACCTCCTATCCAACATCGTCGCCT
ACCCCGACGCATCTTATCCGTCGCGCGTCCCCGCTAATAACGTCGCCCTC
GAGCAAGTCCTGCGCACGAAACTAGATCCCCGCGTTGAGGATTGGGTAGC
GCGCGGTCGTCGCGCCGGGGCGCCAACTACTTCTTCTGATGCTGGAGCCG
GAGCACTGGGACAATACCAGACCAGCAGTGGACAGAGATTATTGAGTGAT
GATGCGATTGCTGAATTGTGGGATTGGGCGCCTGTCGCGGCGAATGAGGA
GGCCAGGAAGAGGAATTGGGGCGGCAATTATACGTTGGAGGAGCGGGAGA
TGGGGATTGAGAATGTAGTTACGGGGTTGAGCAGGGTGTTGGAGGATGAT
GATGAGGAGGATGAGAGTGATAGTGAAGAGGGAGAGGGCGAGGCGGATGA
GATGGAGGTTGTCGGGGCAAGGAGAAGGTCCGGGGCTGGAGCTGGGCTGG
AGTTCGATATTGCTGCTGCGAATACTGGGTCTGGGGCTAATGCTGGTGCG
GGGGCTAAGGTGGTTGCGCCTGTGGTGCCATTGGATGAGATTCTGAGGTT
CATGACTACGGGGGCTGTGCCGGGACAGCGGTGA
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Coding sequence (CDS) from alignment at OGUI01000013.1:1706809..1707692-

>ATCC64974_79050-T1 ID=ATCC64974_79050-T1|Name=ATCC64974_79050-T1|organism=Aspergillus niger N402|type=CDS|length=1620bp|location=Sequence derived from alignment at OGUI01000013.1:1706809..1707692- (Aspergillus niger N402)
GACATCCCTCCAATCCCAAGCAACCATCATCTCCAACAACCTCCTCACCA
TCTCCGACCACCTCTCCGATAACCGCGACCTCCTATCCAACATCGTCGCC
TACCCCGACGCATCTTATCCGTCGCGCGTCCCCGCTAATAACGTCGCCCT
CGAGCAAGTCCTGCGCACGAAACTAGATCCCCGCGTTGAGGATTGGGTAG
CGCGCGGTCGTCGCGCCGGGGCGCCAACTACTTCTTCTGATGCTGGAGCC
GGAGCACTGGGACAATACCAGACCAGCAGTGGACAGAGATTATTGAGTGA
TGATGCGATTGCTGAATTGTGGGATTGGGCGCCTGTCGCGGCGAATGAGG
AGGCCAGGAAGAGGAATTGGGGCGGCAATTATACGTTGGAGGAGCGGGAG
ATGGGGATTGAGAATGTAGTTACGGGGTTGAGCAGGGTGTTGGAGGATGA
TGATGAGGAGGATGAGAGTGATAGTGAAGAGGGAGAGGGCGAGGCGGATG
AGATGGAGGTTGTCGGGGCAAGGAGAAGGTCCGGGGCTGGAGCTGGGCTG
GAGTTCGATATTGCTGCTGCGAATACTGGGTCTGGGGCTAATGCTGGTGC
GGGGGCTAAGGTGGTTGCGCCTGTGGTGCCATTGGATGAGATTCTGAGGT
TCATGACTACGGGGGCTGTGCCGGGACAGCGGTGAATGTCCTCCCTCAAC
CAAGACCAAATCAAAACCCTCGAACAATCCCGCCAACGCCTCATCCAACT
CACCCATTCCCTCGCCTCTCTCATAACCAGTCTCAATCAAAGCGATCCTC
TCCCCTCCTGGACATCCCTCCAATCCCAAGCAACCATCATCTCCAACAAC
CTCCTCACCATCTCCGACCACCTCTCCGATAACCGCGACCTCCTATCCAA
CATCGTCGCCTACCCCGACGCATCTTATCCGTCGCGCGTCCCCGCTAATA
ACGTCGCCCTCGAGCAAGTCCTGCGCACGAAACTAGATCCCCGCGTTGAG
GATTGGGTAGCGCGCGGTCGTCGCGCCGGGGCGCCAACTACTTCTTCTGA
TGCTGGAGCCGGAGCACTGGGACAATACCAGACCAGCAGTGGACAGAGAT
TATTGAGTGATGATGCGATTGCTGAATTGTGGGATTGGGCGCCTGTCGCG
GCGAATGAGGAGGCCAGGAAGAGGAATTGGGGCGGCAATTATACGTTGGA
GGAGCGGGAGATGGGGATTGAGAATGTAGTTACGGGGTTGAGCAGGGTGT
TGGAGGATGATGATGAGGAGGATGAGAGTGATAGTGAAGAGGGAGAGGGC
GAGGCGGATGAGATGGAGGTTGTCGGGGCAAGGAGAAGGTCCGGGGCTGG
AGCTGGGCTGGAGTTCGATATTGCTGCTGCGAATACTGGGTCTGGGGCTA
ATGCTGGTGCGGGGGCTAAGGTGGTTGCGCCTGTGGTGCCATTGGATGAG
ATTCTGAGGTTCATGACTACGGGGGCTGTGCCGGGACAGCGGTGAATGTC
CTCCCTCAACCAAGACCAAATCAAAACCCTCGAACAATCCCGCCAACGCC
TCATCCAACTCACCCATTCCCTCGCCTCTCTCATAACCAGTCTCAATCAA
AGCGATCCTCTCCCCTCCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MED8ATCC64974_79050Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_79050-T1ATCC64974_79050-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_79050-T1.cdsATCC64974_79050-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_79050-T1.exon2ATCC64974_79050-T1.exon2Aspergillus niger N402exon
ATCC64974_79050-T1.exon1ATCC64974_79050-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR019364
DBxrefPFAM:PF10232
Productmediator of RNA polymerase II transcription subunit 8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1706809..1707692 -
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