You are here

Home

ATCC64974_80330-T1, ATCC64974_80330-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_80330-T1
Unique NameATCC64974_80330-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:2132488..2133361-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_80330-T1 ID=ATCC64974_80330-T1|Name=ATCC64974_80330-T1|organism=Aspergillus niger N402|type=mRNA|length=874bp|location=Sequence derived from alignment at OGUI01000013.1:2132488..2133361- (Aspergillus niger N402)
ATGGCTGCTTCCCTCGTCCGCACCTCTGCCCGTACGGCCCTGCGCGCCGG
AGCTTCGGCTACTCCCAGAACTGCCGGCATGGCGGGCTTGACCTTTGCCC
GCGGCAAGGCTACTCTCCCTGACCTGTCCTGTATGCATCCAGCTGCCATT
CTCGAGACGCATAGATCTTGAAGTCACCGAACTGACTCCCTGTAGACGAC
TATGGCGCTCTCGAGCCCTCCATCTCCGGCAAGATCATGGAGCTTCACCA
CAAGAACCACCACCAGACCTACGTCAACAGCTACAACACTGCCATTGAGC
AGCTCCAGGAGGCCCAGCACAAGAACGACATTGCGGCCCAGATTGCCCTC
AAGCCCCTGATCAACTTCCACGGTGGTGGTCACCTGAACCACACCCTCTT
CTGGGAGAACCTTGCTCCCAAGAGCGCTGGCGGTGGTGAGCCCCCGTCCG
GTGCCCTGTCGACTGCCATCAACGACACCTTCGGCAGCCTGGAGGAGTTC
CAGAACAAGATGAACGCTGCTCTTGCTGCTATCCAGGGTAGCGGCTGGGC
CTGGCTCGTCAAGGACAAGCAGACCGGTCACATTGGCATCAAGGCCTACG
CCGTAAGAATGCACCATGCATGCGAAGAAAGTATTTGAGTTGGCTAACGA
TTTCACAGAACCAGGACCCCGTTGTCGGTCAGTTCCAGCCCCTGCTGGGT
ATTGACGCCTGGGAGCACGCCTACTAGTAAGTGCACCTGACCCAACCCGT
TGGAATCATCAGGAGCTAATATTGTCTATCTAGCCTCCAATACCAGAACC
GCAAGGCCGAGTACTTCAAGGCCATCTGGGAGGTCATCAACTGGAAGGCC
GTGGAGAAGCGCTTCTCCGCCTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000013.1:2132488..2133361-

>ATCC64974_80330-T1 ID=ATCC64974_80330-T1|Name=ATCC64974_80330-T1|organism=Aspergillus niger N402|type=CDS|length=2784bp|location=Sequence derived from alignment at OGUI01000013.1:2132488..2133361- (Aspergillus niger N402)
CCTCCAATACCAGAACCGCAAGGCCGAGTACTTCAAGGCCATCTGGGAGG
TCATCAACTGGAAGGCCGTGGAGAAGCGCTTCTCCGCCTAAAACCAGGAC
CCCGTTGTCGGTCAGTTCCAGCCCCTGCTGGGTATTGACGCCTGGGAGCA
CGCCTACTAACGACTATGGCGCTCTCGAGCCCTCCATCTCCGGCAAGATC
ATGGAGCTTCACCACAAGAACCACCACCAGACCTACGTCAACAGCTACAA
CACTGCCATTGAGCAGCTCCAGGAGGCCCAGCACAAGAACGACATTGCGG
CCCAGATTGCCCTCAAGCCCCTGATCAACTTCCACGGTGGTGGTCACCTG
AACCACACCCTCTTCTGGGAGAACCTTGCTCCCAAGAGCGCTGGCGGTGG
TGAGCCCCCGTCCGGTGCCCTGTCGACTGCCATCAACGACACCTTCGGCA
GCCTGGAGGAGTTCCAGAACAAGATGAACGCTGCTCTTGCTGCTATCCAG
GGTAGCGGCTGGGCCTGGCTCGTCAAGGACAAGCAGACCGGTCACATTGG
CATCAAGGCCTACGCCATGGCTGCTTCCCTCGTCCGCACCTCTGCCCGTA
CGGCCCTGCGCGCCGGAGCTTCGGCTACTCCCAGAACTGCCGGCATGGCG
GGCTTGACCTTTGCCCGCGGCAAGGCTACTCTCCCTGACCTGTCCTCCTC
CAATACCAGAACCGCAAGGCCGAGTACTTCAAGGCCATCTGGGAGGTCAT
CAACTGGAAGGCCGTGGAGAAGCGCTTCTCCGCCTAAAACCAGGACCCCG
TTGTCGGTCAGTTCCAGCCCCTGCTGGGTATTGACGCCTGGGAGCACGCC
TACTAACGACTATGGCGCTCTCGAGCCCTCCATCTCCGGCAAGATCATGG
AGCTTCACCACAAGAACCACCACCAGACCTACGTCAACAGCTACAACACT
GCCATTGAGCAGCTCCAGGAGGCCCAGCACAAGAACGACATTGCGGCCCA
GATTGCCCTCAAGCCCCTGATCAACTTCCACGGTGGTGGTCACCTGAACC
ACACCCTCTTCTGGGAGAACCTTGCTCCCAAGAGCGCTGGCGGTGGTGAG
CCCCCGTCCGGTGCCCTGTCGACTGCCATCAACGACACCTTCGGCAGCCT
GGAGGAGTTCCAGAACAAGATGAACGCTGCTCTTGCTGCTATCCAGGGTA
GCGGCTGGGCCTGGCTCGTCAAGGACAAGCAGACCGGTCACATTGGCATC
AAGGCCTACGCCATGGCTGCTTCCCTCGTCCGCACCTCTGCCCGTACGGC
CCTGCGCGCCGGAGCTTCGGCTACTCCCAGAACTGCCGGCATGGCGGGCT
TGACCTTTGCCCGCGGCAAGGCTACTCTCCCTGACCTGTCCTCCTCCAAT
ACCAGAACCGCAAGGCCGAGTACTTCAAGGCCATCTGGGAGGTCATCAAC
TGGAAGGCCGTGGAGAAGCGCTTCTCCGCCTAAAACCAGGACCCCGTTGT
CGGTCAGTTCCAGCCCCTGCTGGGTATTGACGCCTGGGAGCACGCCTACT
AACGACTATGGCGCTCTCGAGCCCTCCATCTCCGGCAAGATCATGGAGCT
TCACCACAAGAACCACCACCAGACCTACGTCAACAGCTACAACACTGCCA
TTGAGCAGCTCCAGGAGGCCCAGCACAAGAACGACATTGCGGCCCAGATT
GCCCTCAAGCCCCTGATCAACTTCCACGGTGGTGGTCACCTGAACCACAC
CCTCTTCTGGGAGAACCTTGCTCCCAAGAGCGCTGGCGGTGGTGAGCCCC
CGTCCGGTGCCCTGTCGACTGCCATCAACGACACCTTCGGCAGCCTGGAG
GAGTTCCAGAACAAGATGAACGCTGCTCTTGCTGCTATCCAGGGTAGCGG
CTGGGCCTGGCTCGTCAAGGACAAGCAGACCGGTCACATTGGCATCAAGG
CCTACGCCATGGCTGCTTCCCTCGTCCGCACCTCTGCCCGTACGGCCCTG
CGCGCCGGAGCTTCGGCTACTCCCAGAACTGCCGGCATGGCGGGCTTGAC
CTTTGCCCGCGGCAAGGCTACTCTCCCTGACCTGTCCTCCTCCAATACCA
GAACCGCAAGGCCGAGTACTTCAAGGCCATCTGGGAGGTCATCAACTGGA
AGGCCGTGGAGAAGCGCTTCTCCGCCTAAAACCAGGACCCCGTTGTCGGT
CAGTTCCAGCCCCTGCTGGGTATTGACGCCTGGGAGCACGCCTACTAACG
ACTATGGCGCTCTCGAGCCCTCCATCTCCGGCAAGATCATGGAGCTTCAC
CACAAGAACCACCACCAGACCTACGTCAACAGCTACAACACTGCCATTGA
GCAGCTCCAGGAGGCCCAGCACAAGAACGACATTGCGGCCCAGATTGCCC
TCAAGCCCCTGATCAACTTCCACGGTGGTGGTCACCTGAACCACACCCTC
TTCTGGGAGAACCTTGCTCCCAAGAGCGCTGGCGGTGGTGAGCCCCCGTC
CGGTGCCCTGTCGACTGCCATCAACGACACCTTCGGCAGCCTGGAGGAGT
TCCAGAACAAGATGAACGCTGCTCTTGCTGCTATCCAGGGTAGCGGCTGG
GCCTGGCTCGTCAAGGACAAGCAGACCGGTCACATTGGCATCAAGGCCTA
CGCCATGGCTGCTTCCCTCGTCCGCACCTCTGCCCGTACGGCCCTGCGCG
CCGGAGCTTCGGCTACTCCCAGAACTGCCGGCATGGCGGGCTTGACCTTT
GCCCGCGGCAAGGCTACTCTCCCTGACCTGTCCT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004784superoxide dismutase activity
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006801superoxide metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_80330ATCC64974_80330Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80330-T1ATCC64974_80330-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80330-T1.cdsATCC64974_80330-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80330-T1.exon4ATCC64974_80330-T1.exon4Aspergillus niger N402exon
ATCC64974_80330-T1.exon3ATCC64974_80330-T1.exon3Aspergillus niger N402exon
ATCC64974_80330-T1.exon2ATCC64974_80330-T1.exon2Aspergillus niger N402exon
ATCC64974_80330-T1.exon1ATCC64974_80330-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR019833
DBxrefInterPro:IPR019832
DBxrefInterPro:IPR019831
DBxrefInterPro:IPR036314
DBxrefInterPro:IPR036324
DBxrefInterPro:IPR001189
DBxrefPFAM:PF00081
DBxrefPFAM:PF02777
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:2132488..2133361 -
Powered by Drupal