You are here

Home

ATCC64974_83070-T1, ATCC64974_83070-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_83070-T1
Unique NameATCC64974_83070-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000014.1:220008..221865+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_83070-T1 ID=ATCC64974_83070-T1|Name=ATCC64974_83070-T1|organism=Aspergillus niger N402|type=mRNA|length=1858bp|location=Sequence derived from alignment at OGUI01000014.1:220008..221865+ (Aspergillus niger N402)
ATGCACACCCAGTTTTTCGTCGTCTGTTCCTTCTTCGAAGGCAGCAACTC
CTACTCCATCAATCATCGTGGTACCCTCGTCGAGTGCAGTCCCCTCACCC
TCTACCTCGCCTGTAAGGGAATCGCCAACTCCCAGTTCAAGGCCGGTACC
CAGTCGTTCAGCAGCTCCCCGCCCGCATTGGACCTATGTATCCCGGCCTT
TACCTCAGCGAAGCCAGTGTTCGGCTTCGTCCAGAGCAATTCCGAGCTCT
TCACTCCCTGTCCCCAGACTATCTGGAATCACATCCAGCGCAGTTCCCGC
GCTAACCCCTGTTGGGGCCGCATTTCCTCAGTCGAACATTTTCACATCCT
CGTCAGCTGCAACATTCGCCGAGTCTTCCACACTGCAGTTAACTACGTCG
GCGGTCCTCTCTACTCGTACGGCCACAATTACTGCATGCCCATCTGCAGT
CCCAGATTGTCCTCCACGCTCGAGAACAACCCTTGTCACCACAGAGACCA
TTGTGGTGTCCACCACAGTATGCCCAGTTACCGAGGCTGCTCGTGCGACT
CGGACGGATTCTGCCTCGCCGACAGCAACCGACACTGCTGTCAACAATGG
TCATGGCAGCGGTGGAGCGGAGCTTACAACTTCCACGGTTTTCAGCACTC
GCACTGCTACCATAACTGCGTGCCCTTCCTCGGTAACAAATTGCCCGCTC
AGGTCGAAAACGACCTATGTGACCACCGAGACCTTGGTAGTCTCAACCAC
TGTTTGCCCCGTAGCCGACATCACTGGTAGCAGCGGCGCTGTAATTGCTA
CCCAGTCTGCATCTCATCCTTCGGCTAGCGTGGCTGTTGGTGACAACTGG
AGCAGCATGGGTGGATTTGACATTACTACTTCTACGATCTTGAGCACCCG
TGTGATCACTGTTACTGCATGTCCCTCTTCCGTGACCAACTGTCCCATGA
GGTCCAAGACGACTTATGCAAGCACTGAGACACTGGTTGTCGCGACGACT
GTGTACCCAGTCCCGAAGGTCTCTAATACCAAAGCAAAGACTCCTCTTCC
ATCTGTCACAAGAGCATCGGAAGAGGGACCATCACTCACCACCTCCACCA
TCCTGAGCACCCGCATTGCCACAGTTGCCAGCTGCACTGGGGATGACTGT
CGCAGTTCATCGTCTGACTCTTATGTCACGACTGAGACCCTCGTTGTAGG
AACGACCGTTTACACAGTATATCCAGAATATGTATCCGTCCCAACCGAAG
GTGTTGATGCTATGGCTGCTCCTACGACCGCTGCCACGCTCCTCCAGACT
GCCAACTCAGCGGGTAGCTCCCCCAAGGTTGTTTCATCTGGATCGCAGCC
CACATCTGCAAGTGAGACTAGCACTCAGGGTACAGGCTCAAGTGCAGGCT
CAAGTGCGGAGTCAAGTGAAGGATCGGATGCCGGCTCTGCTGCAGACTCC
AGCGCAGTGTCCGGTGCGGGCTCAGGTGCAGCCGCAGACACAACCTACAC
CACCACGATTATCGTCGAATCATGCTCCAATGACGGAACCTGCACCGAGT
ATGGCAGTACCATCACAATGGCCCAGACCTCCAATCTTGCTCAGCCCACT
GTGCCTCCCTCCCCGTATTCGTACACCTCGTACTTGGGCTCAGGATTGGG
TTGGAACCACAGTACTCCTGTCTCTTCAGCACATGTCTGGCCCCAGAGCA
GTCACCAAGCTGGCATGAGCACGGCTATGGTTACTAGCACAAGAAGCGCA
AGTGCCGTTAATGCATTGTACACTGGGTCTGCTTCTGCAGGTTCCCAGTG
GTCGATGCTGCAGGTGGTCGGAATGGCGGTAGCAATTCTGACGGCTGTTC
TTGTCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000014.1:220008..221865+

>ATCC64974_83070-T1 ID=ATCC64974_83070-T1|Name=ATCC64974_83070-T1|organism=Aspergillus niger N402|type=CDS|length=3600bp|location=Sequence derived from alignment at OGUI01000014.1:220008..221865+ (Aspergillus niger N402)
ATGCACACCCAGTTTTTCGTCGTCTGTTCCTTCTTCGAAGGCAGCAACTC
CTACTCCATCAATCATCGTGGTACCCTCGTCGAGTGCAGTCCCCTCACCC
TCTACCTCGCCTGTAAGGGAATCGCCAACTCCCAGTTCAAGGCCGGTACC
CAGTCGTTCAGCAGCTCCCCGCCCGCATTGGACCTATGTATCCCGGCCTT
TACCTCAGCGAAGCCAGTGTTCGGCTTCGTCCAGAGCAATTCCGAGCTCT
TCACTCCCTGTCCCCAGACTATCTGGAATCACATCCAGCGCAGTTCCCGC
GCTAACCCCTGTTGGGGCCGCATTTCCTCAGTCGAACATTTTCACATCCT
CGTCAGCTGCAACATTCGCCGAGTCTTCCACACTGCAGTTAACTACGTCG
GCGGTCCTCTCTACTCGTACGGCCACAATTACTGCATGCCCATCTGCAGT
CCCAGATTGTCCTCCACGCTCGAGAACAACCCTTGTCACCACAGAGACCA
TTGTGGTGTCCACCACACAACCGACACTGCTGTCAACAATGGTCATGGCA
GCGGTGGAGCGGAGCTTACAACTTCCACGGTTTTCAGCACTCGCACTGCT
ACCATAACTGCGTGCCCTTCCTCGGTAACAAATTGCCCGCTCAGGTCGAA
AACGACCTATGTGACCACCGAGACCTTGGTAGTCTCAACCACTGTTTGCC
CCGTAGCCGACATCACTGGTAGCAGCGGCGCTGTAATTGCTACCCAGTCT
GCATCTCATCCTTCGGCTAGCGTGGCTGTTGGTGACAACTGGAGCAGCAT
GGGTGGATTTGACATTACTACTTCTACGATCTTGAGCACCCGTGTGATCA
CTGTTACTGCATGTCCCTCTTCCGTGACCAACTGTCCCATGAGGTCCAAG
ACGACTTATGCAAGCACTGAGACACTGGTTGTCGCGACGACTGTGTACCC
AGTCCCGAAGGTCTCTAATACCAAAGCAAAGACTCCTCTTCCATCTGTCA
CAAGAGCATCGGAAGAGGGACCATCACTCACCACCTCCACCATCCTGAGC
ACCCGCATTGCCACAGTTGCCAGCTGCACTGGGGATGACTGTCGCAGTTC
ATCGTCTGACTCTTATGTCACGACTGAGACCCTCGTTGTAGGAACGACCG
TTTACACAGTATATCCAGAATATGTATCCGTCCCAACCGAAGGTGTTGAT
GCTATGGCTGCTCCTACGACCGCTGCCACGCTCCTCCAGACTGCCAACTC
AGCGGGTAGCTCCCCCAAGGTTGTTTCATCTGGATCGCAGCCCACATCTG
CAAGTGAGACTAGCACTCAGGGTACAGGCTCAAGTGCAGGCTCAAGTGCG
GAGTCAAGTGAAGGATCGGATGCCGGCTCTGCTGCAGACTCCAGCGCAGT
GTCCGGTGCGGGCTCAGGTGCAGCCGCAGACACAACCTACACCACCACGA
TTATCGTCGAATCATGCTCCAATGACGGAACCTGCACCGAGTATGGCAGT
ACCATCACAATGGCCCAGACCTCCAATCTTGCTCAGCCCACTGTGCCTCC
CTCCCCGTATTCGTACACCTCGTACTTGGGCTCAGGATTGGGTTGGAACC
ACAGTACTCCTGTCTCTTCAGCACATGTCTGGCCCCAGAGCAGTCACCAA
GCTGGCATGAGCACGGCTATGGTTACTAGCACAAGAAGCGCAAGTGCCGT
TAATGCATTGTACACTGGGTCTGCTTCTGCAGGTTCCCAGTGGTCGATGC
TGCAGGTGGTCGGAATGGCGGTAGCAATTCTGACGGCTGTTCTTGTCTAG
ATGCACACCCAGTTTTTCGTCGTCTGTTCCTTCTTCGAAGGCAGCAACTC
CTACTCCATCAATCATCGTGGTACCCTCGTCGAGTGCAGTCCCCTCACCC
TCTACCTCGCCTGTAAGGGAATCGCCAACTCCCAGTTCAAGGCCGGTACC
CAGTCGTTCAGCAGCTCCCCGCCCGCATTGGACCTATGTATCCCGGCCTT
TACCTCAGCGAAGCCAGTGTTCGGCTTCGTCCAGAGCAATTCCGAGCTCT
TCACTCCCTGTCCCCAGACTATCTGGAATCACATCCAGCGCAGTTCCCGC
GCTAACCCCTGTTGGGGCCGCATTTCCTCAGTCGAACATTTTCACATCCT
CGTCAGCTGCAACATTCGCCGAGTCTTCCACACTGCAGTTAACTACGTCG
GCGGTCCTCTCTACTCGTACGGCCACAATTACTGCATGCCCATCTGCAGT
CCCAGATTGTCCTCCACGCTCGAGAACAACCCTTGTCACCACAGAGACCA
TTGTGGTGTCCACCACACAACCGACACTGCTGTCAACAATGGTCATGGCA
GCGGTGGAGCGGAGCTTACAACTTCCACGGTTTTCAGCACTCGCACTGCT
ACCATAACTGCGTGCCCTTCCTCGGTAACAAATTGCCCGCTCAGGTCGAA
AACGACCTATGTGACCACCGAGACCTTGGTAGTCTCAACCACTGTTTGCC
CCGTAGCCGACATCACTGGTAGCAGCGGCGCTGTAATTGCTACCCAGTCT
GCATCTCATCCTTCGGCTAGCGTGGCTGTTGGTGACAACTGGAGCAGCAT
GGGTGGATTTGACATTACTACTTCTACGATCTTGAGCACCCGTGTGATCA
CTGTTACTGCATGTCCCTCTTCCGTGACCAACTGTCCCATGAGGTCCAAG
ACGACTTATGCAAGCACTGAGACACTGGTTGTCGCGACGACTGTGTACCC
AGTCCCGAAGGTCTCTAATACCAAAGCAAAGACTCCTCTTCCATCTGTCA
CAAGAGCATCGGAAGAGGGACCATCACTCACCACCTCCACCATCCTGAGC
ACCCGCATTGCCACAGTTGCCAGCTGCACTGGGGATGACTGTCGCAGTTC
ATCGTCTGACTCTTATGTCACGACTGAGACCCTCGTTGTAGGAACGACCG
TTTACACAGTATATCCAGAATATGTATCCGTCCCAACCGAAGGTGTTGAT
GCTATGGCTGCTCCTACGACCGCTGCCACGCTCCTCCAGACTGCCAACTC
AGCGGGTAGCTCCCCCAAGGTTGTTTCATCTGGATCGCAGCCCACATCTG
CAAGTGAGACTAGCACTCAGGGTACAGGCTCAAGTGCAGGCTCAAGTGCG
GAGTCAAGTGAAGGATCGGATGCCGGCTCTGCTGCAGACTCCAGCGCAGT
GTCCGGTGCGGGCTCAGGTGCAGCCGCAGACACAACCTACACCACCACGA
TTATCGTCGAATCATGCTCCAATGACGGAACCTGCACCGAGTATGGCAGT
ACCATCACAATGGCCCAGACCTCCAATCTTGCTCAGCCCACTGTGCCTCC
CTCCCCGTATTCGTACACCTCGTACTTGGGCTCAGGATTGGGTTGGAACC
ACAGTACTCCTGTCTCTTCAGCACATGTCTGGCCCCAGAGCAGTCACCAA
GCTGGCATGAGCACGGCTATGGTTACTAGCACAAGAAGCGCAAGTGCCGT
TAATGCATTGTACACTGGGTCTGCTTCTGCAGGTTCCCAGTGGTCGATGC
TGCAGGTGGTCGGAATGGCGGTAGCAATTCTGACGGCTGTTCTTGTCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_83070ATCC64974_83070Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_83070-T1.exon1ATCC64974_83070-T1.exon1Aspergillus niger N402exon
ATCC64974_83070-T1.exon2ATCC64974_83070-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_83070-T1.cdsATCC64974_83070-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_83070-T1ATCC64974_83070-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000141.5
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000014.1supercontigOGUI01000014.1:220008..221865 +
Powered by Drupal