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ATCC64974_8320-T1, ATCC64974_8320-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_8320-T1
Unique NameATCC64974_8320-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:279231..280503+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_8320-T1 ID=ATCC64974_8320-T1|Name=ATCC64974_8320-T1|organism=Aspergillus niger N402|type=mRNA|length=1273bp|location=Sequence derived from alignment at OGUI01000002.1:279231..280503+ (Aspergillus niger N402)
ATGGAGCACAACGCGGATCGTGATGAGATTGTCTCTCAATTCTGCGCCAT
GACTAGGACGGATCCTCACGAGGTACATGTTAATCATCCCAGACTGAGCT
ATGGTTGCTAACTACATACTTCATCTCAGGCGCAAGGCTATCTCGCAGCC
AACGAGTGGGACCTCGAAGCCGCAGTGACCGAATTCTTCGCCGAACAAGA
TGAAGCTTCACAGGATACTGGTGCGGCTGGTGGTGGTCGCCGACTGGGCA
CTGAATCGGAACCCTCTGCAGGCCGTTCGCTTGGTGGCAGCTCCTCTCAT
TCCCCCTCCATTACCCCGCAGCCCTCGTCCCGCAGGTCGGCCCCGAAAAA
GAAGTTTGCGACCCTGAACGACTTTGCGTCGGGTGGTGGAGAATCTTCAG
AGGAAGACGATGCAGTGAACCAGGACTTCTTCGCTGGAGGGGAGAAGTCG
GGCTTGGCTGTGCAGAACCCCGATGATATTAAGAAGAAGATCATTGAAAA
GGCCAAAAGGTGAGGTCTTTTGGATACTCTTGGTTGGTCAGGGCTGATAT
GTTTATAGGGCTCAACCTCCACCATCGGACGAACCTACCAGAAGGTCTTT
CTTCACCGGCACAGCACGTACCCTTGGTGGTGATGAGGCTCCCAGCAGGG
TAATCGAAGCCCCCAGTGCACCTGTTTCGCAGACACCGCAGCGCGTACAT
AGAACCCTACACTTCTGGTCAGATGGCTTCTCTGTTGATGACGGAGAGCT
GTTCAACTCCGACGACCCCGCCAACCGCGAAATCCTCGAGGGTATCCGCC
AGGGCCGTGCCCCGCTCTCCATCATGAATGTGCAGGCTGGCCAGGAGGTG
GACGTGGAGATCAAACAGCACGACGAGAAATACGTGAAGCCCAAGCCTAA
GTACAAGCCCTTCTCCGGGGCTGGACAGCGCCTCGGCAGCCCCACGCCTG
GTGTGAGCGCACCTGCGCCAGCAGCAGCTCCTACTCCCAGTCAGTCTACC
GAGCCAGCCAAGCCGGACGTAGATGAGTCGCAGCCGATAGTGACTCTTCA
GATCCGCCTTGGAGACGGCTCACGGCTCACTTCCCGGTTCAACACCACCC
ATACCATTGGTGACGTGTACCAGTTTGTGTCCGCTGCCAGCCTCAGTAGC
CAGTCGCGTCCCTGGGTATTGATGACTACGTTCCCCAGCAAGGATCTTTC
TGACAAGAGTGTTGTGCTGGGTGATATGGCGGAGTTTAAGCGGGGCGGCG
TGGTGGTACAGAAGTGGCAATAA
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Coding sequence (CDS) from alignment at OGUI01000002.1:279231..280503+

>ATCC64974_8320-T1 ID=ATCC64974_8320-T1|Name=ATCC64974_8320-T1|organism=Aspergillus niger N402|type=CDS|length=3501bp|location=Sequence derived from alignment at OGUI01000002.1:279231..280503+ (Aspergillus niger N402)
ATGGAGCACAACGCGGATCGTGATGAGATTGTCTCTCAATTCTGCGCCAT
GACTAGGACGGATCCTCACGAGGCGCAAGGCTATCTCGCAGCCAACGAGT
GGGACCTCGAAGCCGCAGTGACCGAATTCTTCGCCGAACAAGATGAAGCT
TCACAGGATACTGGTGCGGCTGGTGGTGGTCGCCGACTGGGCACTGAATC
GGAACCCTCTGCAGGCCGTTCGCTTGGTGGCAGCTCCTCTCATTCCCCCT
CCATTACCCCGCAGCCCTCGTCCCGCAGGTCGGCCCCGAAAAAGAAGTTT
GCGACCCTGAACGACTTTGCGTCGGGTGGTGGAGAATCTTCAGAGGAAGA
CGATGCAGTGAACCAGGACTTCTTCGCTGGAGGGGAGAAGTCGGGCTTGG
CTGTGCAGAACCCCGATGATATTAAGAAGAAGATCATTGAAAAGGCCAAA
AGGGCTCAACCTCCACCATCGGACGAACCTACCAGAAGGTCTTTCTTCAC
CGGCACAGCACGTACCCTTGGTGGTGATGAGGCTCCCAGCAGGGTAATCG
AAGCCCCCAGTGCACCTGTTTCGCAGACACCGCAGCGCGTACATAGAACC
CTACACTTCTGGTCAGATGGCTTCTCTGTTGATGACGGAGAGCTGTTCAA
CTCCGACGACCCCGCCAACCGCGAAATCCTCGAGGGTATCCGCCAGGGCC
GTGCCCCGCTCTCCATCATGAATGTGCAGGCTGGCCAGGAGGTGGACGTG
GAGATCAAACAGCACGACGAGAAATACGTGAAGCCCAAGCCTAAGTACAA
GCCCTTCTCCGGGGCTGGACAGCGCCTCGGCAGCCCCACGCCTGGTGTGA
GCGCACCTGCGCCAGCAGCAGCTCCTACTCCCAGTCAGTCTACCGAGCCA
GCCAAGCCGGACGTAGATGAGTCGCAGCCGATAGTGACTCTTCAGATCCG
CCTTGGAGACGGCTCACGGCTCACTTCCCGGTTCAACACCACCCATACCA
TTGGTGACGTGTACCAGTTTGTGTCCGCTGCCAGCCTCAGTAGCCAGTCG
CGTCCCTGGGTATTGATGACTACGTTCCCCAGCAAGGATCTTTCTGACAA
GAGTGTTGTGCTGGGTGATATGGCGGAGTTTAAGCGGGGCGGCGTGGTGG
TACAGAAGTGGCAATAAATGGAGCACAACGCGGATCGTGATGAGATTGTC
TCTCAATTCTGCGCCATGACTAGGACGGATCCTCACGAGGCGCAAGGCTA
TCTCGCAGCCAACGAGTGGGACCTCGAAGCCGCAGTGACCGAATTCTTCG
CCGAACAAGATGAAGCTTCACAGGATACTGGTGCGGCTGGTGGTGGTCGC
CGACTGGGCACTGAATCGGAACCCTCTGCAGGCCGTTCGCTTGGTGGCAG
CTCCTCTCATTCCCCCTCCATTACCCCGCAGCCCTCGTCCCGCAGGTCGG
CCCCGAAAAAGAAGTTTGCGACCCTGAACGACTTTGCGTCGGGTGGTGGA
GAATCTTCAGAGGAAGACGATGCAGTGAACCAGGACTTCTTCGCTGGAGG
GGAGAAGTCGGGCTTGGCTGTGCAGAACCCCGATGATATTAAGAAGAAGA
TCATTGAAAAGGCCAAAAGGGCTCAACCTCCACCATCGGACGAACCTACC
AGAAGGTCTTTCTTCACCGGCACAGCACGTACCCTTGGTGGTGATGAGGC
TCCCAGCAGGGTAATCGAAGCCCCCAGTGCACCTGTTTCGCAGACACCGC
AGCGCGTACATAGAACCCTACACTTCTGGTCAGATGGCTTCTCTGTTGAT
GACGGAGAGCTGTTCAACTCCGACGACCCCGCCAACCGCGAAATCCTCGA
GGGTATCCGCCAGGGCCGTGCCCCGCTCTCCATCATGAATGTGCAGGCTG
GCCAGGAGGTGGACGTGGAGATCAAACAGCACGACGAGAAATACGTGAAG
CCCAAGCCTAAGTACAAGCCCTTCTCCGGGGCTGGACAGCGCCTCGGCAG
CCCCACGCCTGGTGTGAGCGCACCTGCGCCAGCAGCAGCTCCTACTCCCA
GTCAGTCTACCGAGCCAGCCAAGCCGGACGTAGATGAGTCGCAGCCGATA
GTGACTCTTCAGATCCGCCTTGGAGACGGCTCACGGCTCACTTCCCGGTT
CAACACCACCCATACCATTGGTGACGTGTACCAGTTTGTGTCCGCTGCCA
GCCTCAGTAGCCAGTCGCGTCCCTGGGTATTGATGACTACGTTCCCCAGC
AAGGATCTTTCTGACAAGAGTGTTGTGCTGGGTGATATGGCGGAGTTTAA
GCGGGGCGGCGTGGTGGTACAGAAGTGGCAATAAATGGAGCACAACGCGG
ATCGTGATGAGATTGTCTCTCAATTCTGCGCCATGACTAGGACGGATCCT
CACGAGGCGCAAGGCTATCTCGCAGCCAACGAGTGGGACCTCGAAGCCGC
AGTGACCGAATTCTTCGCCGAACAAGATGAAGCTTCACAGGATACTGGTG
CGGCTGGTGGTGGTCGCCGACTGGGCACTGAATCGGAACCCTCTGCAGGC
CGTTCGCTTGGTGGCAGCTCCTCTCATTCCCCCTCCATTACCCCGCAGCC
CTCGTCCCGCAGGTCGGCCCCGAAAAAGAAGTTTGCGACCCTGAACGACT
TTGCGTCGGGTGGTGGAGAATCTTCAGAGGAAGACGATGCAGTGAACCAG
GACTTCTTCGCTGGAGGGGAGAAGTCGGGCTTGGCTGTGCAGAACCCCGA
TGATATTAAGAAGAAGATCATTGAAAAGGCCAAAAGGGCTCAACCTCCAC
CATCGGACGAACCTACCAGAAGGTCTTTCTTCACCGGCACAGCACGTACC
CTTGGTGGTGATGAGGCTCCCAGCAGGGTAATCGAAGCCCCCAGTGCACC
TGTTTCGCAGACACCGCAGCGCGTACATAGAACCCTACACTTCTGGTCAG
ATGGCTTCTCTGTTGATGACGGAGAGCTGTTCAACTCCGACGACCCCGCC
AACCGCGAAATCCTCGAGGGTATCCGCCAGGGCCGTGCCCCGCTCTCCAT
CATGAATGTGCAGGCTGGCCAGGAGGTGGACGTGGAGATCAAACAGCACG
ACGAGAAATACGTGAAGCCCAAGCCTAAGTACAAGCCCTTCTCCGGGGCT
GGACAGCGCCTCGGCAGCCCCACGCCTGGTGTGAGCGCACCTGCGCCAGC
AGCAGCTCCTACTCCCAGTCAGTCTACCGAGCCAGCCAAGCCGGACGTAG
ATGAGTCGCAGCCGATAGTGACTCTTCAGATCCGCCTTGGAGACGGCTCA
CGGCTCACTTCCCGGTTCAACACCACCCATACCATTGGTGACGTGTACCA
GTTTGTGTCCGCTGCCAGCCTCAGTAGCCAGTCGCGTCCCTGGGTATTGA
TGACTACGTTCCCCAGCAAGGATCTTTCTGACAAGAGTGTTGTGCTGGGT
GATATGGCGGAGTTTAAGCGGGGCGGCGTGGTGGTACAGAAGTGGCAATA
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBX1ATCC64974_8320Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8320-T1.exon1ATCC64974_8320-T1.exon1Aspergillus niger N402exon
ATCC64974_8320-T1.exon2ATCC64974_8320-T1.exon2Aspergillus niger N402exon
ATCC64974_8320-T1.exon3ATCC64974_8320-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8320-T1.cdsATCC64974_8320-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8320-T1ATCC64974_8320-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926423H
DBxrefInterPro:IPR009060
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR036241
DBxrefInterPro:IPR012989
DBxrefInterPro:IPR001012
DBxrefPFAM:PF00789
DBxrefPFAM:PF14555
DBxrefPFAM:PF08059
ProductUBX domain-containing protein 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:279231..280503 +
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