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ATCC64974_84960-T1, ATCC64974_84960-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_84960-T1
Unique NameATCC64974_84960-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000014.1:765268..767307+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_84960-T1 ID=ATCC64974_84960-T1|Name=ATCC64974_84960-T1|organism=Aspergillus niger N402|type=mRNA|length=2040bp|location=Sequence derived from alignment at OGUI01000014.1:765268..767307+ (Aspergillus niger N402)
ATGGATCGCATTCGCCAGAAACTGGGGAGATATCCCGTTTCCAGCGTCCT
GAGGGCTTTTAGAGGCCCGCGGTGGTCCCTTACGTCGATTCATTATCCGC
ACCTGCGCTTCCGCTCTACAGTCACATCCGCCGCCCTTCCCTCAGCAATT
ACAGCCCCAGAAACCCCCCCGCTGATCGTTCTCCGCGACTACCAAGAAGA
ATGCATTCAGTCTGTGCTGGATCATCTGGCCCAGGGTCACAAACGTCTAG
GTATTTCGCTTGCCACAGGAGCGGGGAAGACGGTCATCTTCACCCAATTA
ATCGGACGAATACCGCCGCGGAATGGTGTCCATGACAAGACCCTTATTCT
GGTTCACCGAAGGGAGCTAGTAGAGCAAGCTGCCCGACACTGTCGCCTTG
CCTATCCCGATCGAGCTGTGGAGATTGAGATGGGGAATAGTGTCGCGTCT
GGGTCTGGGGATATCATCATTGCTTCCATACGGAGTCTTACCTCCAAGAA
TAGGATCTCCAAATTTGATCCCAGACGTTTCAAGCTTGTCTTGGTGGATG
AGGCACACCACATTGTTGCACCGACGTACCGCGTTGCTCTCGAACATTTT
GGCCTCAGTAACCCGTCGCCGGACTCGCCAGCTCTCGTCGGGGTCTCTGC
CACGTTCTCACGCTTTGATGGACTCAAATTGGGTGCCGCAATCGACCATA
TAGTGTACCATAAGGACTACATGGATATGATTGACGAAAAATGGCTGTCC
AATGCCATTTTTACCACTGTTCGGTCAGAAGCAAATCTCTCACGCGTTAA
GAAGGACAAATTCGGTGATTTCGCTATCAGCTCGCTCTCGGAAGCCGTCA
ATACCACGAAAACTAATGATATCACTGTACGCGCATGGCTGGCTAACGCA
CACGATCGAAAGTCTACACTGGTATTTTGTGTCGACGTTGAACATACTAG
ACAGCTTACTGAGGCGTTCCGCGCACTGGGCATTGACGCTCGGTATATCA
CGGCGGGAACTCCGAGGGATGTGCGCGATGAGCAGCTGCGTGCTTTCCGG
AACCAGGAGTATCCCGTGCTTCTCAATTGCGGCTTATTTACAGAAGGTAC
AGATATTCCCAATATTGACTGCGTCCTCCTGGCACGTCCGACACGGTCTC
GAAATCTTCTTATACAGATGATCGGACGAGGGTTACGGCTGCACCCGGGG
AAGACCGACTGCCATATAATTGACATGGTGGCTACCCTGGACACTGGTGT
CATTTCTACCCCTACGCTCTTCGGACTACACCCAGATGAGCTTCTAGAAA
GCGCGAGGGCAAAAAATCTAAGAGAAAAGAAGGAGGATGCCGCAATGGAT
GCCGAAGGCCGCACCGATTATCCGCCAGAGACAAGCACGTCTGCCGAAGA
ACCCGACACAACTGATGATATCAAACTTACCTTCACCAAGTACGATACCA
TCTACGACCTCATTCATGATATGAAGTCTGAGAAACACATCCGCTCCCTC
AGTCGCTACGCCTGGGTCCGCGTAGATGAGGACAAATATACACTGTCTGA
CTCAACAGGATGGATCACCCTTGAGAAGACTAGAAACATATCTAACAAGG
GAAAAGAAAGTGACCCGTCCGCTACATATACCGTCCACCATGTGATGAAG
TTCAAGTCTGCTACTGAATCGACCCAGTACACTCGGCCACGTTTGATCGC
TACGGCCATGGACTTTGAATCCACAGTCCGTGCTGCTGATACCTTCGCGG
CCTCTGAATTCGACGAACGGTACATCTCCACCCGGCAGCCCTGGCGTCAG
CATCCGGCCACTGCAGCGCAGGTAACGATGCTGAATAAAGCTAAGATTCG
GAATGGACGGATTGCGCCTGGGGATTTGACACGAGGCCAGGCCGCAGACC
TGATTACGAAGCTGAAGTTTGGTGGGAAGAAGCGGTTCGCGAGCAGGCAG
AAAAAACGACGGGCTGCCGATGAGAAAGCACAGGAGTTGGCCGAACTCCG
GAGACGCGAAGAGGTGAGAGTGGGACCTGTAGAGGGATGA
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Coding sequence (CDS) from alignment at OGUI01000014.1:765268..767307+

>ATCC64974_84960-T1 ID=ATCC64974_84960-T1|Name=ATCC64974_84960-T1|organism=Aspergillus niger N402|type=CDS|length=2040bp|location=Sequence derived from alignment at OGUI01000014.1:765268..767307+ (Aspergillus niger N402)
ATGGATCGCATTCGCCAGAAACTGGGGAGATATCCCGTTTCCAGCGTCCT
GAGGGCTTTTAGAGGCCCGCGGTGGTCCCTTACGTCGATTCATTATCCGC
ACCTGCGCTTCCGCTCTACAGTCACATCCGCCGCCCTTCCCTCAGCAATT
ACAGCCCCAGAAACCCCCCCGCTGATCGTTCTCCGCGACTACCAAGAAGA
ATGCATTCAGTCTGTGCTGGATCATCTGGCCCAGGGTCACAAACGTCTAG
GTATTTCGCTTGCCACAGGAGCGGGGAAGACGGTCATCTTCACCCAATTA
ATCGGACGAATACCGCCGCGGAATGGTGTCCATGACAAGACCCTTATTCT
GGTTCACCGAAGGGAGCTAGTAGAGCAAGCTGCCCGACACTGTCGCCTTG
CCTATCCCGATCGAGCTGTGGAGATTGAGATGGGGAATAGTGTCGCGTCT
GGGTCTGGGGATATCATCATTGCTTCCATACGGAGTCTTACCTCCAAGAA
TAGGATCTCCAAATTTGATCCCAGACGTTTCAAGCTTGTCTTGGTGGATG
AGGCACACCACATTGTTGCACCGACGTACCGCGTTGCTCTCGAACATTTT
GGCCTCAGTAACCCGTCGCCGGACTCGCCAGCTCTCGTCGGGGTCTCTGC
CACGTTCTCACGCTTTGATGGACTCAAATTGGGTGCCGCAATCGACCATA
TAGTGTACCATAAGGACTACATGGATATGATTGACGAAAAATGGCTGTCC
AATGCCATTTTTACCACTGTTCGGTCAGAAGCAAATCTCTCACGCGTTAA
GAAGGACAAATTCGGTGATTTCGCTATCAGCTCGCTCTCGGAAGCCGTCA
ATACCACGAAAACTAATGATATCACTGTACGCGCATGGCTGGCTAACGCA
CACGATCGAAAGTCTACACTGGTATTTTGTGTCGACGTTGAACATACTAG
ACAGCTTACTGAGGCGTTCCGCGCACTGGGCATTGACGCTCGGTATATCA
CGGCGGGAACTCCGAGGGATGTGCGCGATGAGCAGCTGCGTGCTTTCCGG
AACCAGGAGTATCCCGTGCTTCTCAATTGCGGCTTATTTACAGAAGGTAC
AGATATTCCCAATATTGACTGCGTCCTCCTGGCACGTCCGACACGGTCTC
GAAATCTTCTTATACAGATGATCGGACGAGGGTTACGGCTGCACCCGGGG
AAGACCGACTGCCATATAATTGACATGGTGGCTACCCTGGACACTGGTGT
CATTTCTACCCCTACGCTCTTCGGACTACACCCAGATGAGCTTCTAGAAA
GCGCGAGGGCAAAAAATCTAAGAGAAAAGAAGGAGGATGCCGCAATGGAT
GCCGAAGGCCGCACCGATTATCCGCCAGAGACAAGCACGTCTGCCGAAGA
ACCCGACACAACTGATGATATCAAACTTACCTTCACCAAGTACGATACCA
TCTACGACCTCATTCATGATATGAAGTCTGAGAAACACATCCGCTCCCTC
AGTCGCTACGCCTGGGTCCGCGTAGATGAGGACAAATATACACTGTCTGA
CTCAACAGGATGGATCACCCTTGAGAAGACTAGAAACATATCTAACAAGG
GAAAAGAAAGTGACCCGTCCGCTACATATACCGTCCACCATGTGATGAAG
TTCAAGTCTGCTACTGAATCGACCCAGTACACTCGGCCACGTTTGATCGC
TACGGCCATGGACTTTGAATCCACAGTCCGTGCTGCTGATACCTTCGCGG
CCTCTGAATTCGACGAACGGTACATCTCCACCCGGCAGCCCTGGCGTCAG
CATCCGGCCACTGCAGCGCAGGTAACGATGCTGAATAAAGCTAAGATTCG
GAATGGACGGATTGCGCCTGGGGATTTGACACGAGGCCAGGCCGCAGACC
TGATTACGAAGCTGAAGTTTGGTGGGAAGAAGCGGTTCGCGAGCAGGCAG
AAAAAACGACGGGCTGCCGATGAGAAAGCACAGGAGTTGGCCGAACTCCG
GAGACGCGAAGAGGTGAGAGTGGGACCTGTAGAGGGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_84960ATCC64974_84960Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_84960-T1.exon1ATCC64974_84960-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_84960-T1.cdsATCC64974_84960-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_84960-T1ATCC64974_84960-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000141.7
NoteBUSCO:EOG09261CM0
NoteSMCOG1122:ATP-dependent RNA helicase
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR006935
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000014.1supercontigOGUI01000014.1:765268..767307 +
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