You are here

Home

ATCC64974_85050-T1, ATCC64974_85050-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_85050-T1
Unique NameATCC64974_85050-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000014.1:799039..800280+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_85050-T1 ID=ATCC64974_85050-T1|Name=ATCC64974_85050-T1|organism=Aspergillus niger N402|type=mRNA|length=1242bp|location=Sequence derived from alignment at OGUI01000014.1:799039..800280+ (Aspergillus niger N402)
ATGGTGACGGAGGAACAGTCGGCTCCGCCACCCGAACGCGGGATGAGCAC
GCCAGGCGATCTCAAGCGGAATCCGCTAACCCCAGAGCAATTGCGGAGAA
TAGTACATACTATGATCACGGTTCCTCTAGTTCGGAGCTGACACGATATT
GAATCCAGGAAAACAATCGCCAGAAAGCCATAGCAATACGAGAACAACGC
GAAGCCGAACAAGCTCGAGCTCACAATGCTGATCCTTCCTCCACCAAAGG
TGTCAAGCGAACCTACTCCTCCATGACTGCCTCCGATCCTCCGGCGACTC
TGCGCGATGCGGCCTCTACAGATAATCGCCCCCTAGATGGCATCAAGCCG
GCGCGCAACTTTACCAAATTCGTTGAATACGACTTCTCCAAGATCACCGA
CACGAAGGGTGGGTTCTTGACCGAAGAGGATGACCGCTACAACAAAGCCC
TTCATGTTCGGGATGAGAAGGCGGAGCAGAAGCCAGCGCACATGACGCAG
AAGGAATGGGAGCGACAACAGCTGCTAAAGAATCTCCATCGAGATCGTGC
AGGACCCTTCGAACCGGGGCTCAGTGTGTTGGATGAGCGGACACGACAGA
AAACGTGCCGAGAGTGTGGCAGCTTAGAAATCGACTGGAAATGGGAAGAA
GCGCTCCGGTGCTGTGTCTGCCATGCTTGCAAGGATAAATTTCCGGAGAA
ATACAGTCTACTTACCAAGACCGAGGCACGAGAGGACTACCTCCTGACCA
ATCGTGAGTATCCCCCTGCACAGGTTTGCGGCATGGTTTGCCACTGAGCG
TTCGCTGACCACGGGCCCAACTGCAGCCGAACTTCAGGATGAGGAACTCC
TCCCACACCTGGAGCGCCCGAATCCGCATAAATCAACGTGGAATAACATG
ATGCTGTATCTACGGTATCAGGTGGAAGAGTACGCCTTTTCCGCCAAGAA
ATGGGGCTCACCCGAAGCCTTGGACGCGGAGTTTGAGCGACGCGAGAATG
AGAAGAAGCGCCGGCGGGAGGTCAAATTCAAGAGCAAACTTGAAGACCTT
AAGAAGCGTACGCGAGTCGATGCATACCGACGTAGCCGGCAAGGAGCGAC
CGGTGGTAATTTTGGAGATGACCTGGGGGGTGGTGGACGACATGTACATC
AGTGGGGAAGATCGGTCGAAGATCCCAAGACGGGGATTGGGGTCAAGAAA
TGCGTTGACTGCGGGATGGAAGTCGAAGAACTCGAGTTCTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000014.1:799039..800280+

>ATCC64974_85050-T1 ID=ATCC64974_85050-T1|Name=ATCC64974_85050-T1|organism=Aspergillus niger N402|type=CDS|length=3339bp|location=Sequence derived from alignment at OGUI01000014.1:799039..800280+ (Aspergillus niger N402)
ATGGTGACGGAGGAACAGTCGGCTCCGCCACCCGAACGCGGGATGAGCAC
GCCAGGCGATCTCAAGCGGAATCCGCTAACCCCAGAGCAATTGCGGAGAA
TAGAAAACAATCGCCAGAAAGCCATAGCAATACGAGAACAACGCGAAGCC
GAACAAGCTCGAGCTCACAATGCTGATCCTTCCTCCACCAAAGGTGTCAA
GCGAACCTACTCCTCCATGACTGCCTCCGATCCTCCGGCGACTCTGCGCG
ATGCGGCCTCTACAGATAATCGCCCCCTAGATGGCATCAAGCCGGCGCGC
AACTTTACCAAATTCGTTGAATACGACTTCTCCAAGATCACCGACACGAA
GGGTGGGTTCTTGACCGAAGAGGATGACCGCTACAACAAAGCCCTTCATG
TTCGGGATGAGAAGGCGGAGCAGAAGCCAGCGCACATGACGCAGAAGGAA
TGGGAGCGACAACAGCTGCTAAAGAATCTCCATCGAGATCGTGCAGGACC
CTTCGAACCGGGGCTCAGTGTGTTGGATGAGCGGACACGACAGAAAACGT
GCCGAGAGTGTGGCAGCTTAGAAATCGACTGGAAATGGGAAGAAGCGCTC
CGGTGCTGTGTCTGCCATGCTTGCAAGGATAAATTTCCGGAGAAATACAG
TCTACTTACCAAGACCGAGGCACGAGAGGACTACCTCCTGACCAATCCCG
AACTTCAGGATGAGGAACTCCTCCCACACCTGGAGCGCCCGAATCCGCAT
AAATCAACGTGGAATAACATGATGCTGTATCTACGGTATCAGGTGGAAGA
GTACGCCTTTTCCGCCAAGAAATGGGGCTCACCCGAAGCCTTGGACGCGG
AGTTTGAGCGACGCGAGAATGAGAAGAAGCGCCGGCGGGAGGTCAAATTC
AAGAGCAAACTTGAAGACCTTAAGAAGCGTACGCGAGTCGATGCATACCG
ACGTAGCCGGCAAGGAGCGACCGGTGGTAATTTTGGAGATGACCTGGGGG
GTGGTGGACGACATGTACATCAGTGGGGAAGATCGGTCGAAGATCCCAAG
ACGGGGATTGGGGTCAAGAAATGCGTTGACTGCGGGATGGAAGTCGAAGA
ACTCGAGTTCTAAATGGTGACGGAGGAACAGTCGGCTCCGCCACCCGAAC
GCGGGATGAGCACGCCAGGCGATCTCAAGCGGAATCCGCTAACCCCAGAG
CAATTGCGGAGAATAGAAAACAATCGCCAGAAAGCCATAGCAATACGAGA
ACAACGCGAAGCCGAACAAGCTCGAGCTCACAATGCTGATCCTTCCTCCA
CCAAAGGTGTCAAGCGAACCTACTCCTCCATGACTGCCTCCGATCCTCCG
GCGACTCTGCGCGATGCGGCCTCTACAGATAATCGCCCCCTAGATGGCAT
CAAGCCGGCGCGCAACTTTACCAAATTCGTTGAATACGACTTCTCCAAGA
TCACCGACACGAAGGGTGGGTTCTTGACCGAAGAGGATGACCGCTACAAC
AAAGCCCTTCATGTTCGGGATGAGAAGGCGGAGCAGAAGCCAGCGCACAT
GACGCAGAAGGAATGGGAGCGACAACAGCTGCTAAAGAATCTCCATCGAG
ATCGTGCAGGACCCTTCGAACCGGGGCTCAGTGTGTTGGATGAGCGGACA
CGACAGAAAACGTGCCGAGAGTGTGGCAGCTTAGAAATCGACTGGAAATG
GGAAGAAGCGCTCCGGTGCTGTGTCTGCCATGCTTGCAAGGATAAATTTC
CGGAGAAATACAGTCTACTTACCAAGACCGAGGCACGAGAGGACTACCTC
CTGACCAATCCCGAACTTCAGGATGAGGAACTCCTCCCACACCTGGAGCG
CCCGAATCCGCATAAATCAACGTGGAATAACATGATGCTGTATCTACGGT
ATCAGGTGGAAGAGTACGCCTTTTCCGCCAAGAAATGGGGCTCACCCGAA
GCCTTGGACGCGGAGTTTGAGCGACGCGAGAATGAGAAGAAGCGCCGGCG
GGAGGTCAAATTCAAGAGCAAACTTGAAGACCTTAAGAAGCGTACGCGAG
TCGATGCATACCGACGTAGCCGGCAAGGAGCGACCGGTGGTAATTTTGGA
GATGACCTGGGGGGTGGTGGACGACATGTACATCAGTGGGGAAGATCGGT
CGAAGATCCCAAGACGGGGATTGGGGTCAAGAAATGCGTTGACTGCGGGA
TGGAAGTCGAAGAACTCGAGTTCTAAATGGTGACGGAGGAACAGTCGGCT
CCGCCACCCGAACGCGGGATGAGCACGCCAGGCGATCTCAAGCGGAATCC
GCTAACCCCAGAGCAATTGCGGAGAATAGAAAACAATCGCCAGAAAGCCA
TAGCAATACGAGAACAACGCGAAGCCGAACAAGCTCGAGCTCACAATGCT
GATCCTTCCTCCACCAAAGGTGTCAAGCGAACCTACTCCTCCATGACTGC
CTCCGATCCTCCGGCGACTCTGCGCGATGCGGCCTCTACAGATAATCGCC
CCCTAGATGGCATCAAGCCGGCGCGCAACTTTACCAAATTCGTTGAATAC
GACTTCTCCAAGATCACCGACACGAAGGGTGGGTTCTTGACCGAAGAGGA
TGACCGCTACAACAAAGCCCTTCATGTTCGGGATGAGAAGGCGGAGCAGA
AGCCAGCGCACATGACGCAGAAGGAATGGGAGCGACAACAGCTGCTAAAG
AATCTCCATCGAGATCGTGCAGGACCCTTCGAACCGGGGCTCAGTGTGTT
GGATGAGCGGACACGACAGAAAACGTGCCGAGAGTGTGGCAGCTTAGAAA
TCGACTGGAAATGGGAAGAAGCGCTCCGGTGCTGTGTCTGCCATGCTTGC
AAGGATAAATTTCCGGAGAAATACAGTCTACTTACCAAGACCGAGGCACG
AGAGGACTACCTCCTGACCAATCCCGAACTTCAGGATGAGGAACTCCTCC
CACACCTGGAGCGCCCGAATCCGCATAAATCAACGTGGAATAACATGATG
CTGTATCTACGGTATCAGGTGGAAGAGTACGCCTTTTCCGCCAAGAAATG
GGGCTCACCCGAAGCCTTGGACGCGGAGTTTGAGCGACGCGAGAATGAGA
AGAAGCGCCGGCGGGAGGTCAAATTCAAGAGCAAACTTGAAGACCTTAAG
AAGCGTACGCGAGTCGATGCATACCGACGTAGCCGGCAAGGAGCGACCGG
TGGTAATTTTGGAGATGACCTGGGGGGTGGTGGACGACATGTACATCAGT
GGGGAAGATCGGTCGAAGATCCCAAGACGGGGATTGGGGTCAAGAAATGC
GTTGACTGCGGGATGGAAGTCGAAGAACTCGAGTTCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006289nucleotide-excision repair
Vocabulary: Molecular Function
TermDefinition
GO:0003684damaged DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_85050ATCC64974_85050Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_85050-T1.exon1ATCC64974_85050-T1.exon1Aspergillus niger N402exon
ATCC64974_85050-T1.exon2ATCC64974_85050-T1.exon2Aspergillus niger N402exon
ATCC64974_85050-T1.exon3ATCC64974_85050-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_85050-T1.cdsATCC64974_85050-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_85050-T1ATCC64974_85050-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092641G3
DBxrefInterPro:IPR009061
DBxrefInterPro:IPR037129
DBxrefInterPro:IPR022656
DBxrefInterPro:IPR000465
DBxrefPFAM:PF05181
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000014.1supercontigOGUI01000014.1:799039..800280 +
Powered by Drupal