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ATCC64974_85180-T1, ATCC64974_85180-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_85180-T1
Unique NameATCC64974_85180-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000015.1:55565..57875-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_85180-T1 ID=ATCC64974_85180-T1|Name=ATCC64974_85180-T1|organism=Aspergillus niger N402|type=mRNA|length=2311bp|location=Sequence derived from alignment at OGUI01000015.1:55565..57875- (Aspergillus niger N402)
ATGTCTGGTCTAAGCTCTCCTTTGATGCCATGCGACCGCTCTGTCTCCAT
CCCTTGTCGGCGATACGATGCGGATGCCACCCTGTTGCTCGTGGGGTTCG
TCGGTGCCGGAAAGAAGACCCTAGGTATTATAGCATCTGTCGCCCTGCGG
CGCAGATTTATTGATTTCGATGCTGTATTTCGTCAGGAGGTGCACTTATC
TCCCCAGGAGTACATTGCACAAAATGGTCCCGCGCGATACCGGGAGCTGG
AGCTGAAATTGACTCGCACTCTGCTAGATAAATGCTCCACAGGATGTGTA
ATTACCATCTCGGGCGTGGGATGGTCGGCAAATCGCCAGCAGCAGGTGCT
TTTGAAGAAGTTTGCACAGAACCATCCCGTGGTGTATGTCAGACGCGACA
GGGTGGATCTTCAACAGTTCATCATGACCACTAGCCCTGACAAGTTCAAC
CGGATCTTTGAAGCGGGCAATGAGTTCTTCCAGTCATGCTCCAGCTTTGA
CTTTTTCAATCACACACAGGAAGACAAGTTGACAGACTATGCTGGTCGCC
CACTCCCGGCGTATATCAAACTCAAGGAAGCTGAACGAGTGTTCCTAAGG
TTCTTGCATCAGGTCTTCGGTCGTGCTTATCATGTGCTCTATTCTTCGGA
CCCGTTTTCACCGTCTCATACATATGCGCTACAGGTGCCGCTAACCTGGC
TGGACTGCAATCCGGACCTGGAACTATTGGAGAGTGGCGCTGACGCGGTT
ACTATTGTGATTGACGGGGGAGTCGGTGATAATTACAATGCCCGATTCCT
GGAAAGAATTGCCAAGCACATGGCGACGATCCGGAAGCATACTCGGATTC
CAATATTCATCGAGATTCCGCAGTCAGATGCTAGACGCGGTGAGCTCTTG
GAGATGCTGCTTCGACTCGCACCCGATGCTGTGGCATGTCCTGTTGACGG
CTGCGAATTTAGCAGATTAAAGTTGGCTAAAGGCCACACTAAGATCATTG
CCACCTATCAGTCCACCTCCTTGGCTAGGGACCAGAGTATCCTTCCTGAA
ATACGTTCTCTTCTGGACAATTCAGAGAAGCAAGGGTTCGATGCCTTTCG
CGTTACTATAGAGCCCAGCTTCCCAGGGGATCTCACGAATCTTACTTTAC
AGCAACGGCTGGGTGAGGTAACAGACATTCCCATAACCGTATACCATAGT
GGGCCACTCGGACGAGCATCTATATGTCTAAATCCCATTCTCTCGCCAGT
GGTCCTCCCATCTCTTCCGGATAGTGCCACAGGGGTCACACTCGCATCGG
CCCAGCAAGCACTTACATCCTGCTACCTGCTTCCGAAACAAACCTTCACC
GTCTTCGGCCAAAAAGTCCAAAACAGTCTCTCACCAGCAATGCACAATGC
AGCCTACTCTGCCTGCGGTCTACCACACGCCTACAACATATTATGCAGTG
ATCACTTCTCCGACATCCACAAACTCCTAAACAGCGCAGAGCATGGAGGA
ATAGCTGTAACACTACCATACAAAACGGACGTCCTCCCATTACTAGACGA
AGTCAGCCCAGATGCCCAGGACATCCACGCCGTAAACACGGTGGTCATCG
AGCACCGAAATAGCAGTACCAACAGCCCCTCCAAGGTCCTTAAAGGCTAC
AACACAGATTATCTCGGGATCCGCGACTGCATCAACAAACACCTCTCTCC
CGCCAATGCCATCCGACACGGCACCACAGCCTTGGTAATAGGCGCAGGCG
GAATGGCCCGCGCAGCCATCTATGCATGCTACCAGCTCGGCGTCCGCCAG
ATCTGCATCTATAACCGGACTGTTTCGAATGCGCAGAAGCTAGCTGACTA
TTATACCCGGTGGGCTGAGAGGAATAATACCCATCTGAAGATCGAGATTC
TGCGATCGAGTGACGACGCCTGGCCAGAGGGCTTTCGTCAACCGACTATT
ATTGTTGCGTGTTTGCCGGCGCCGGCTGGAGGGCAGTTGAAGTCCCCTAT
TACGATGGAGGTGCCGGAGCAGTGGTTGAGGAGTACGACTGGGGGTGTTT
TCATTGATGTATGTGTTCTCAAATACCCTGATTTTTTAATGAGAGGTGCT
AACTGGACAGGTGGCGTATGGAATGCCGCAGACCAAGCTGAGAATTGGTA
TGAATGAACGAGCGAGTATGGGCTGGGTCGTGGTTGATGGTCTGGTGGTG
TTGTTGGAGCAGGGCATTGCGCAGTATGAGCTGTTTACAAGGAGGCCGGC
GCCGGTGCATGTGATGAGGGGGGTATTGAGGGAGTATACTAATGCAACAC
TTAGCAGGTAG
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Coding sequence (CDS) from alignment at OGUI01000015.1:55565..57875-

>ATCC64974_85180-T1 ID=ATCC64974_85180-T1|Name=ATCC64974_85180-T1|organism=Aspergillus niger N402|type=CDS|length=4518bp|location=Sequence derived from alignment at OGUI01000015.1:55565..57875- (Aspergillus niger N402)
GTGGCGTATGGAATGCCGCAGACCAAGCTGAGAATTGGTATGAATGAACG
AGCGAGTATGGGCTGGGTCGTGGTTGATGGTCTGGTGGTGTTGTTGGAGC
AGGGCATTGCGCAGTATGAGCTGTTTACAAGGAGGCCGGCGCCGGTGCAT
GTGATGAGGGGGGTATTGAGGGAGTATACTAATGCAACACTTAGCAGGTA
GATGTCTGGTCTAAGCTCTCCTTTGATGCCATGCGACCGCTCTGTCTCCA
TCCCTTGTCGGCGATACGATGCGGATGCCACCCTGTTGCTCGTGGGGTTC
GTCGGTGCCGGAAAGAAGACCCTAGGTATTATAGCATCTGTCGCCCTGCG
GCGCAGATTTATTGATTTCGATGCTGTATTTCGTCAGGAGGTGCACTTAT
CTCCCCAGGAGTACATTGCACAAAATGGTCCCGCGCGATACCGGGAGCTG
GAGCTGAAATTGACTCGCACTCTGCTAGATAAATGCTCCACAGGATGTGT
AATTACCATCTCGGGCGTGGGATGGTCGGCAAATCGCCAGCAGCAGGTGC
TTTTGAAGAAGTTTGCACAGAACCATCCCGTGGTGTATGTCAGACGCGAC
AGGGTGGATCTTCAACAGTTCATCATGACCACTAGCCCTGACAAGTTCAA
CCGGATCTTTGAAGCGGGCAATGAGTTCTTCCAGTCATGCTCCAGCTTTG
ACTTTTTCAATCACACACAGGAAGACAAGTTGACAGACTATGCTGGTCGC
CCACTCCCGGCGTATATCAAACTCAAGGAAGCTGAACGAGTGTTCCTAAG
GTTCTTGCATCAGGTCTTCGGTCGTGCTTATCATGTGCTCTATTCTTCGG
ACCCGTTTTCACCGTCTCATACATATGCGCTACAGGTGCCGCTAACCTGG
CTGGACTGCAATCCGGACCTGGAACTATTGGAGAGTGGCGCTGACGCGGT
TACTATTGTGATTGACGGGGGAGTCGGTGATAATTACAATGCCCGATTCC
TGGAAAGAATTGCCAAGCACATGGCGACGATCCGGAAGCATACTCGGATT
CCAATATTCATCGAGATTCCGCAGTCAGATGCTAGACGCGGTGAGCTCTT
GGAGATGCTGCTTCGACTCGCACCCGATGCTGTGGCATGTCCTGTTGACG
GCTGCGAATTTAGCAGATTAAAGTTGGCTAAAGGCCACACTAAGATCATT
GCCACCTATCAGTCCACCTCCTTGGCTAGGGACCAGAGTATCCTTCCTGA
AATACGTTCTCTTCTGGACAATTCAGAGAAGCAAGGGTTCGATGCCTTTC
GCGTTACTATAGAGCCCAGCTTCCCAGGGGATCTCACGAATCTTACTTTA
CAGCAACGGCTGGGTGAGGTAACAGACATTCCCATAACCGTATACCATAG
TGGGCCACTCGGACGAGCATCTATATGTCTAAATCCCATTCTCTCGCCAG
TGGTCCTCCCATCTCTTCCGGATAGTGCCACAGGGGTCACACTCGCATCG
GCCCAGCAAGCACTTACATCCTGCTACCTGCTTCCGAAACAAACCTTCAC
CGTCTTCGGCCAAAAAGTCCAAAACAGTCTCTCACCAGCAATGCACAATG
CAGCCTACTCTGCCTGCGGTCTACCACACGCCTACAACATATTATGCAGT
GATCACTTCTCCGACATCCACAAACTCCTAAACAGCGCAGAGCATGGAGG
AATAGCTGTAACACTACCATACAAAACGGACGTCCTCCCATTACTAGACG
AAGTCAGCCCAGATGCCCAGGACATCCACGCCGTAAACACGGTGGTCATC
GAGCACCGAAATAGCAGTACCAACAGCCCCTCCAAGGTCCTTAAAGGCTA
CAACACAGATTATCTCGGGATCCGCGACTGCATCAACAAACACCTCTCTC
CCGCCAATGCCATCCGACACGGCACCACAGCCTTGGTAATAGGCGCAGGC
GGAATGGCCCGCGCAGCCATCTATGCATGCTACCAGCTCGGCGTCCGCCA
GATCTGCATCTATAACCGGACTGTTTCGAATGCGCAGAAGCTAGCTGACT
ATTATACCCGGTGGGCTGAGAGGAATAATACCCATCTGAAGATCGAGATT
CTGCGATCGAGTGACGACGCCTGGCCAGAGGGCTTTCGTCAACCGACTAT
TATTGTTGCGTGTTTGCCGGCGCCGGCTGGAGGGCAGTTGAAGTCCCCTA
TTACGATGGAGGTGCCGGAGCAGTGGTTGAGGAGTACGACTGGGGGTGTT
TTCATTGATGTGGCGTATGGAATGCCGCAGACCAAGCTGAGAATTGGTAT
GAATGAACGAGCGAGTATGGGCTGGGTCGTGGTTGATGGTCTGGTGGTGT
TGTTGGAGCAGGGCATTGCGCAGTATGAGCTGTTTACAAGGAGGCCGGCG
CCGGTGCATGTGATGAGGGGGGTATTGAGGGAGTATACTAATGCAACACT
TAGCAGGTAGATGTCTGGTCTAAGCTCTCCTTTGATGCCATGCGACCGCT
CTGTCTCCATCCCTTGTCGGCGATACGATGCGGATGCCACCCTGTTGCTC
GTGGGGTTCGTCGGTGCCGGAAAGAAGACCCTAGGTATTATAGCATCTGT
CGCCCTGCGGCGCAGATTTATTGATTTCGATGCTGTATTTCGTCAGGAGG
TGCACTTATCTCCCCAGGAGTACATTGCACAAAATGGTCCCGCGCGATAC
CGGGAGCTGGAGCTGAAATTGACTCGCACTCTGCTAGATAAATGCTCCAC
AGGATGTGTAATTACCATCTCGGGCGTGGGATGGTCGGCAAATCGCCAGC
AGCAGGTGCTTTTGAAGAAGTTTGCACAGAACCATCCCGTGGTGTATGTC
AGACGCGACAGGGTGGATCTTCAACAGTTCATCATGACCACTAGCCCTGA
CAAGTTCAACCGGATCTTTGAAGCGGGCAATGAGTTCTTCCAGTCATGCT
CCAGCTTTGACTTTTTCAATCACACACAGGAAGACAAGTTGACAGACTAT
GCTGGTCGCCCACTCCCGGCGTATATCAAACTCAAGGAAGCTGAACGAGT
GTTCCTAAGGTTCTTGCATCAGGTCTTCGGTCGTGCTTATCATGTGCTCT
ATTCTTCGGACCCGTTTTCACCGTCTCATACATATGCGCTACAGGTGCCG
CTAACCTGGCTGGACTGCAATCCGGACCTGGAACTATTGGAGAGTGGCGC
TGACGCGGTTACTATTGTGATTGACGGGGGAGTCGGTGATAATTACAATG
CCCGATTCCTGGAAAGAATTGCCAAGCACATGGCGACGATCCGGAAGCAT
ACTCGGATTCCAATATTCATCGAGATTCCGCAGTCAGATGCTAGACGCGG
TGAGCTCTTGGAGATGCTGCTTCGACTCGCACCCGATGCTGTGGCATGTC
CTGTTGACGGCTGCGAATTTAGCAGATTAAAGTTGGCTAAAGGCCACACT
AAGATCATTGCCACCTATCAGTCCACCTCCTTGGCTAGGGACCAGAGTAT
CCTTCCTGAAATACGTTCTCTTCTGGACAATTCAGAGAAGCAAGGGTTCG
ATGCCTTTCGCGTTACTATAGAGCCCAGCTTCCCAGGGGATCTCACGAAT
CTTACTTTACAGCAACGGCTGGGTGAGGTAACAGACATTCCCATAACCGT
ATACCATAGTGGGCCACTCGGACGAGCATCTATATGTCTAAATCCCATTC
TCTCGCCAGTGGTCCTCCCATCTCTTCCGGATAGTGCCACAGGGGTCACA
CTCGCATCGGCCCAGCAAGCACTTACATCCTGCTACCTGCTTCCGAAACA
AACCTTCACCGTCTTCGGCCAAAAAGTCCAAAACAGTCTCTCACCAGCAA
TGCACAATGCAGCCTACTCTGCCTGCGGTCTACCACACGCCTACAACATA
TTATGCAGTGATCACTTCTCCGACATCCACAAACTCCTAAACAGCGCAGA
GCATGGAGGAATAGCTGTAACACTACCATACAAAACGGACGTCCTCCCAT
TACTAGACGAAGTCAGCCCAGATGCCCAGGACATCCACGCCGTAAACACG
GTGGTCATCGAGCACCGAAATAGCAGTACCAACAGCCCCTCCAAGGTCCT
TAAAGGCTACAACACAGATTATCTCGGGATCCGCGACTGCATCAACAAAC
ACCTCTCTCCCGCCAATGCCATCCGACACGGCACCACAGCCTTGGTAATA
GGCGCAGGCGGAATGGCCCGCGCAGCCATCTATGCATGCTACCAGCTCGG
CGTCCGCCAGATCTGCATCTATAACCGGACTGTTTCGAATGCGCAGAAGC
TAGCTGACTATTATACCCGGTGGGCTGAGAGGAATAATACCCATCTGAAG
ATCGAGATTCTGCGATCGAGTGACGACGCCTGGCCAGAGGGCTTTCGTCA
ACCGACTATTATTGTTGCGTGTTTGCCGGCGCCGGCTGGAGGGCAGTTGA
AGTCCCCTATTACGATGGAGGTGCCGGAGCAGTGGTTGAGGAGTACGACT
GGGGGTGTTTTCATTGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004764shikimate 3-dehydrogenase (NADP+) activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_85180ATCC64974_85180Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_85180-T1ATCC64974_85180-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_85180-T1.cdsATCC64974_85180-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_85180-T1.exon2ATCC64974_85180-T1.exon2Aspergillus niger N402exon
ATCC64974_85180-T1.exon1ATCC64974_85180-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR031322
DBxrefInterPro:IPR041121
DBxrefInterPro:IPR006151
DBxrefInterPro:IPR013708
DBxrefPFAM:PF01202
DBxrefPFAM:PF08501
DBxrefPFAM:PF18317
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000015.1supercontigOGUI01000015.1:55565..57875 -
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