ATCC64974_85190-T1, ATCC64974_85190-T1 (mRNA) Aspergillus niger N402

Overview


Name	ATCC64974_85190-T1
Unique Name	ATCC64974_85190-T1
Type	mRNA
Organism	Aspergillus niger N402

Sequences

The following sequences are available for this feature:

mRNA from alignment at OGUI01000015.1:58102..60146+
coding sequence from alignment at OGUI01000015.1:58102..60146+

mRNA from alignment at OGUI01000015.1:58102..60146+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>ATCC64974_85190-T1 ID=ATCC64974_85190-T1|Name=ATCC64974_85190-T1|organism=Aspergillus niger N402|type=mRNA|length=2045bp|location=Sequence derived from alignment at OGUI01000015.1:58102..60146+ (Aspergillus niger N402)
ATGCCTGAGTCTAGGTCATCCAAGCGTCAGCGCATCGGTCGCGCCTGTGA
TCAGTGTCGGCGTCGAAAGTCCAAATGCGACGGTGACCAGCCAGTCTGCG
CTATTTGCCGCTCGGCGGGCAGGACCTGCACGTATGAAAACATCAGTCGA
CATCGGGGATTGCAATCAGGATATGTTCGCAGTTTAGAGGTGGCTTTGGG
GCTTTTCCTCGAGCGGTTCCCTCGCGATGAGGATGCCTTGCGACGCTTCC
TGCGCGACCCTCAGTGCAAGAAGCAGCTACCGGCAAGTGACTTGGCGGAG
CGTGGGCGACAATCCAGGCTAGCCAAATACGTGTATCGAGTGCTGAATAG
AGACTCACAGGACGAGTCGAGTAGCGAGCTTGAAGACGATACTGGGCTTG
CACCACGGGGCTGCGACGTTGGTAACCATGGGGAAGAGGAAGGAGAGCGC
ACTGCCCAGGCAAGAAGTGCCCCTGGCGAGCGGATATCTCAGGTTGTCTC
GGTGGAATATCTCAATCAGCCCATCCCAGATAATACCAATCAGCTTCTGC
AGTTCTATTTTACCCATATCCACAGCTGGTTTCCTATCATCGAGCGCCGG
GACGTCCTCCGCGTCATGCACACCCCTCCCGATGCGTCATGGTCGGCTCG
AGACGCTGCCTGTCGTCTCGTGTTGTGGGCAATCGTCGCCTATTCATTGG
CAACGGACGACACACTAGGCCGCGGCAGTCAGGTCGATCCAACACAAGTT
GCTCAATCTATCAGATCGCAAGTCCTGAGGGACATTGACCGGCTGCAGCT
TGGCCATCTTCAATCTCTGTTGATCATCACGCTTCTGTACTTGGGGGTGG
GCCATCTGCGTCTGGCATGGGTACTGGTTGGCGAAGCCACCAGGATGCTC
GAGATGCTTCCGGAATCTGCCAGGTGCGCTCGCTACCTACACATCCGGCA
TGGATGCATCTTGATCGACAATCTTACCTCGGCAATTCTGGAAAAAGCTC
CCTGTGCCTCGCTTGATGACCTGCGACAGTGTGCCTTAGTGAGCGAGGAC
GATGTGGACGAATGGGAGCTGTGGTCTATGCTGCGACCTGACCAGGCTTC
AGGAGGCAGTGTAGTCGCCAAAGGCCCCTTGCGAGCTCTAAGCACCCTCA
ACCTTATCCACGAAGTGATGCGATTCCTTAGTCGGATACTATATTATCCT
TCTGGGACGCTCCCCATCCAGGAGCTTGTAGTGGAGCTACGGAACTTGCA
AGCCCTTGTGACGGCCAGGCGGCCTTATCGCGGTCTTGAATTTGCGAGCC
CTCCTCTCCTTACGTTACATCTAACCACGGCCTTCGTGGTATTTTCTCTC
GCTCTGAAGCACAAGACGTTCGATCCGGCCATCAAGCCGCTGGCCATGAC
CAGCTTGCGTCTTACTCTTGAGATATTGGATGCATATACAGAAATCACTG
GGATGGCGGGCTCGTCCCCGCTGCTTCGCTGCTTTTCCTTCCAGGCCTAC
CGGTGTCTACAGAGTGCTCCGAGCATGTCAGGGCCGGGAATGGAGCAGCT
GAGCAGTCGACTGATCCATCATATGCAGCAGCTGAAGCGAAGCGGCGAGG
GCGGTACTTCTTATGAGGCGCTACGTTTTACCTGGTTGCCCCTAGGGAAT
CACCTTGACTGGTCTTACTTACCAGTGCCACGACTCACTACTCAGCGGCC
TTTGGTGCCTGAAGGCACTGTCTACGGTGGACCTGACTTGAACATGGGGA
ATATGCCAATATCAGACCAAGTAATGGCCATGCCCGGCTTGTCCTCTACT
TCTGGTGGTGTTATGGATGTTGGAAATGAAAGACAGGCGCAGGAGACTGA
AGACTTCGATGCTCTCTTTGAGGAGATGGTAGCATCTATTCCGCAAACTA
GGTATGTTCGATATCCCGGACATCATGTTTTCTTACTAACAATAACAGAA
ACGAGCCCACATTTGCCGAGAATTTGGGTTTCTATGCAGGAAATTTAGAT
ACAGACTTTCTGGCTCAGCTTCAACATGTCCCAGACAATAGTTGA

Coding sequence (CDS) from alignment at OGUI01000015.1:58102..60146+

>ATCC64974_85190-T1 ID=ATCC64974_85190-T1|Name=ATCC64974_85190-T1|organism=Aspergillus niger N402|type=CDS|length=3996bp|location=Sequence derived from alignment at OGUI01000015.1:58102..60146+ (Aspergillus niger N402)
ATGCCTGAGTCTAGGTCATCCAAGCGTCAGCGCATCGGTCGCGCCTGTGA
TCAGTGTCGGCGTCGAAAGTCCAAATGCGACGGTGACCAGCCAGTCTGCG
CTATTTGCCGCTCGGCGGGCAGGACCTGCACGTATGAAAACATCAGTCGA
CATCGGGGATTGCAATCAGGATATGTTCGCAGTTTAGAGGTGGCTTTGGG
GCTTTTCCTCGAGCGGTTCCCTCGCGATGAGGATGCCTTGCGACGCTTCC
TGCGCGACCCTCAGTGCAAGAAGCAGCTACCGGCAAGTGACTTGGCGGAG
CGTGGGCGACAATCCAGGCTAGCCAAATACGTGTATCGAGTGCTGAATAG
AGACTCACAGGACGAGTCGAGTAGCGAGCTTGAAGACGATACTGGGCTTG
CACCACGGGGCTGCGACGTTGGTAACCATGGGGAAGAGGAAGGAGAGCGC
ACTGCCCAGGCAAGAAGTGCCCCTGGCGAGCGGATATCTCAGGTTGTCTC
GGTGGAATATCTCAATCAGCCCATCCCAGATAATACCAATCAGCTTCTGC
AGTTCTATTTTACCCATATCCACAGCTGGTTTCCTATCATCGAGCGCCGG
GACGTCCTCCGCGTCATGCACACCCCTCCCGATGCGTCATGGTCGGCTCG
AGACGCTGCCTGTCGTCTCGTGTTGTGGGCAATCGTCGCCTATTCATTGG
CAACGGACGACACACTAGGCCGCGGCAGTCAGGTCGATCCAACACAAGTT
GCTCAATCTATCAGATCGCAAGTCCTGAGGGACATTGACCGGCTGCAGCT
TGGCCATCTTCAATCTCTGTTGATCATCACGCTTCTGTACTTGGGGGTGG
GCCATCTGCGTCTGGCATGGGTACTGGTTGGCGAAGCCACCAGGATGCTC
GAGATGCTTCCGGAATCTGCCAGGTGCGCTCGCTACCTACACATCCGGCA
TGGATGCATCTTGATCGACAATCTTACCTCGGCAATTCTGGAAAAAGCTC
CCTGTGCCTCGCTTGATGACCTGCGACAGTGTGCCTTAGTGAGCGAGGAC
GATGTGGACGAATGGGAGCTGTGGTCTATGCTGCGACCTGACCAGGCTTC
AGGAGGCAGTGTAGTCGCCAAAGGCCCCTTGCGAGCTCTAAGCACCCTCA
ACCTTATCCACGAAGTGATGCGATTCCTTAGTCGGATACTATATTATCCT
TCTGGGACGCTCCCCATCCAGGAGCTTGTAGTGGAGCTACGGAACTTGCA
AGCCCTTGTGACGGCCAGGCGGCCTTATCGCGGTCTTGAATTTGCGAGCC
CTCCTCTCCTTACGTTACATCTAACCACGGCCTTCGTGGTATTTTCTCTC
GCTCTGAAGCACAAGACGTTCGATCCGGCCATCAAGCCGCTGGCCATGAC
CAGCTTGCGTCTTACTCTTGAGATATTGGATGCATATACAGAAATCACTG
GGATGGCGGGCTCGTCCCCGCTGCTTCGCTGCTTTTCCTTCCAGGCCTAC
CGGTGTCTACAGAGTGCTCCGAGCATGTCAGGGCCGGGAATGGAGCAGCT
GAGCAGTCGACTGATCCATCATATGCAGCAGCTGAAGCGAAGCGGCGAGG
GCGGTACTTCTTATGAGGCGCTACGTTTTACCTGGTTGCCCCTAGGGAAT
CACCTTGACTGGTCTTACTTACCAGTGCCACGACTCACTACTCAGCGGCC
TTTGGTGCCTGAAGGCACTGTCTACGGTGGACCTGACTTGAACATGGGGA
ATATGCCAATATCAGACCAAGTAATGGCCATGCCCGGCTTGTCCTCTACT
TCTGGTGGTGTTATGGATGTTGGAAATGAAAGACAGGCGCAGGAGACTGA
AGACTTCGATGCTCTCTTTGAGGAGATGGTAGCATCTATTCCGCAAACTA
GAAACGAGCCCACATTTGCCGAGAATTTGGGTTTCTATGCAGGAAATTTA
GATACAGACTTTCTGGCTCAGCTTCAACATGTCCCAGACAATAGTTGAAT
GCCTGAGTCTAGGTCATCCAAGCGTCAGCGCATCGGTCGCGCCTGTGATC
AGTGTCGGCGTCGAAAGTCCAAATGCGACGGTGACCAGCCAGTCTGCGCT
ATTTGCCGCTCGGCGGGCAGGACCTGCACGTATGAAAACATCAGTCGACA
TCGGGGATTGCAATCAGGATATGTTCGCAGTTTAGAGGTGGCTTTGGGGC
TTTTCCTCGAGCGGTTCCCTCGCGATGAGGATGCCTTGCGACGCTTCCTG
CGCGACCCTCAGTGCAAGAAGCAGCTACCGGCAAGTGACTTGGCGGAGCG
TGGGCGACAATCCAGGCTAGCCAAATACGTGTATCGAGTGCTGAATAGAG
ACTCACAGGACGAGTCGAGTAGCGAGCTTGAAGACGATACTGGGCTTGCA
CCACGGGGCTGCGACGTTGGTAACCATGGGGAAGAGGAAGGAGAGCGCAC
TGCCCAGGCAAGAAGTGCCCCTGGCGAGCGGATATCTCAGGTTGTCTCGG
TGGAATATCTCAATCAGCCCATCCCAGATAATACCAATCAGCTTCTGCAG
TTCTATTTTACCCATATCCACAGCTGGTTTCCTATCATCGAGCGCCGGGA
CGTCCTCCGCGTCATGCACACCCCTCCCGATGCGTCATGGTCGGCTCGAG
ACGCTGCCTGTCGTCTCGTGTTGTGGGCAATCGTCGCCTATTCATTGGCA
ACGGACGACACACTAGGCCGCGGCAGTCAGGTCGATCCAACACAAGTTGC
TCAATCTATCAGATCGCAAGTCCTGAGGGACATTGACCGGCTGCAGCTTG
GCCATCTTCAATCTCTGTTGATCATCACGCTTCTGTACTTGGGGGTGGGC
CATCTGCGTCTGGCATGGGTACTGGTTGGCGAAGCCACCAGGATGCTCGA
GATGCTTCCGGAATCTGCCAGGTGCGCTCGCTACCTACACATCCGGCATG
GATGCATCTTGATCGACAATCTTACCTCGGCAATTCTGGAAAAAGCTCCC
TGTGCCTCGCTTGATGACCTGCGACAGTGTGCCTTAGTGAGCGAGGACGA
TGTGGACGAATGGGAGCTGTGGTCTATGCTGCGACCTGACCAGGCTTCAG
GAGGCAGTGTAGTCGCCAAAGGCCCCTTGCGAGCTCTAAGCACCCTCAAC
CTTATCCACGAAGTGATGCGATTCCTTAGTCGGATACTATATTATCCTTC
TGGGACGCTCCCCATCCAGGAGCTTGTAGTGGAGCTACGGAACTTGCAAG
CCCTTGTGACGGCCAGGCGGCCTTATCGCGGTCTTGAATTTGCGAGCCCT
CCTCTCCTTACGTTACATCTAACCACGGCCTTCGTGGTATTTTCTCTCGC
TCTGAAGCACAAGACGTTCGATCCGGCCATCAAGCCGCTGGCCATGACCA
GCTTGCGTCTTACTCTTGAGATATTGGATGCATATACAGAAATCACTGGG
ATGGCGGGCTCGTCCCCGCTGCTTCGCTGCTTTTCCTTCCAGGCCTACCG
GTGTCTACAGAGTGCTCCGAGCATGTCAGGGCCGGGAATGGAGCAGCTGA
GCAGTCGACTGATCCATCATATGCAGCAGCTGAAGCGAAGCGGCGAGGGC
GGTACTTCTTATGAGGCGCTACGTTTTACCTGGTTGCCCCTAGGGAATCA
CCTTGACTGGTCTTACTTACCAGTGCCACGACTCACTACTCAGCGGCCTT
TGGTGCCTGAAGGCACTGTCTACGGTGGACCTGACTTGAACATGGGGAAT
ATGCCAATATCAGACCAAGTAATGGCCATGCCCGGCTTGTCCTCTACTTC
TGGTGGTGTTATGGATGTTGGAAATGAAAGACAGGCGCAGGAGACTGAAG
ACTTCGATGCTCTCTTTGAGGAGATGGTAGCATCTATTCCGCAAACTAGA
AACGAGCCCACATTTGCCGAGAATTTGGGTTTCTATGCAGGAAATTTAGA
TACAGACTTTCTGGCTCAGCTTCAACATGTCCCAGACAATAGTTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006351	transcription, DNA-templated
GO:0006355	regulation of transcription, DNA-templated

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
ATCC64974_85190	ATCC64974_85190	Aspergillus niger N402	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_85190-T1.exon1	ATCC64974_85190-T1.exon1	Aspergillus niger N402	exon
ATCC64974_85190-T1.exon2	ATCC64974_85190-T1.exon2	Aspergillus niger N402	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_85190-T1.cds	ATCC64974_85190-T1.cds	Aspergillus niger N402	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_85190-T1	ATCC64974_85190-T1-protein	Aspergillus niger N402	polypeptide

Properties


Property Name	Value
Note	EggNog:ENOG41
DBxref	InterPro:IPR007219
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR001138
DBxref	PFAM:PF00172
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger N402 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
OGUI01000015.1	supercontig	OGUI01000015.1:58102..60146 +

Main menu

You are here

ATCC64974_85190-T1, ATCC64974_85190-T1 (mRNA) Aspergillus niger N402

Main menu

User login

You are here

ATCC64974_85190-T1, ATCC64974_85190-T1 (mRNA) Aspergillus niger N402