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ATCC64974_87400-T1, ATCC64974_87400-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_87400-T1
Unique NameATCC64974_87400-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:187852..189045-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_87400-T1 ID=ATCC64974_87400-T1|Name=ATCC64974_87400-T1|organism=Aspergillus niger N402|type=mRNA|length=1194bp|location=Sequence derived from alignment at OGUI01000016.1:187852..189045- (Aspergillus niger N402)
ATGGCGTCAAGTAAGTCGCGAATTGTTTCCATGGCAATCCTCTTCCACTG
ACTAGTGTTAGATCAATTCTCTGTCGCATCCCCGCCGACGGATGCTATCT
CCGCCTTGAAGTTCTCGCCCGACCCCGACTCCACGCGAATCGTTGTTTCT
TCCTGGGATAAGAACGTGTATCTGTACGACTTGCGCGATGAAAATGGTAC
CGTCGGAGAAGGCAAGCTGTTACAGAAGTTTGAGCATCGCGCTCCGGTGT
TGGATGTGTGTTTCGGCGCAACCGAGGATGAGATCTACACGGCTGGCTTG
GATTGGGACGTCAAGAAGTGAGTCCATGTCTGTTCTGTTTGGGCTTCGGT
AGCAACCAGCGCATAACCAACCTATTCCCTGCTGACAATAAACAGAATTG
ATGTAGCATCATCCACCCAGACCGTCCTCAGCAGCCACGAAGCTGGTGTT
CGAAGCGTCGTTTTCAGCAAGGAACACAACCTAGTAATATCCGCCTCTTG
GGACTCCACGTTGCATGTGCACCCGACGAACGATCCCGCCACAGCCCCCG
CTATCATTCCCCTCCCCTCGAAGCCCTTCTCCATGTCTCTTACCGCTACG
AAGCTCGTTGTCGCAATGGCTTCCCGCGCCCTACACATCTACGATCTGAA
AGCATTGGCTATGCTCACCGCTCAGTCGGAGGGTACGGTCCCCAACAAGA
TTGAAATCGAACCCTGGCAGCGAAGGGAGAGCAGCTTGAAGTTCATGACT
CGCTCAGTGGCATGCATGCCCGACGATGCAGGATACGCGTCATCCAGCAT
CGAGGGCCGTGTCGCGGTCGAATGGTTCGATCCGTCTGCTGAGTCGCAAG
CCCGCAAATATGCCTTCAAGTGTCACAGACAGACGGCGGATGATGTCGAC
GTCGTTTACCCTGTCAATGCGCTTGCGTTCCACCCGGTCCACGGTACGTT
TGCTTCGGGCGGTGGTGATGGAGTGGTTGCGCTTTGGGACGGTATTGCGA
AGAGGAGAATCAGACAGTATCAGAAGTATCCGTCGAGTGTGGCTGCTGTG
GACTTTAGCGGTAACGGAAAGTACCTGGCGATCGCGATTAGTCCGGGCTT
CGAGGATGGAAAAGATGATGTTGTCGAAGGGACGGTTAAGATCTTTGTAC
GTGAGCTTGGAGAGACGGAGGCGAAGGGGAAGGGCGCCAAATAA
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Coding sequence (CDS) from alignment at OGUI01000016.1:187852..189045-

>ATCC64974_87400-T1 ID=ATCC64974_87400-T1|Name=ATCC64974_87400-T1|organism=Aspergillus niger N402|type=CDS|length=3195bp|location=Sequence derived from alignment at OGUI01000016.1:187852..189045- (Aspergillus niger N402)
AATTGATGTAGCATCATCCACCCAGACCGTCCTCAGCAGCCACGAAGCTG
GTGTTCGAAGCGTCGTTTTCAGCAAGGAACACAACCTAGTAATATCCGCC
TCTTGGGACTCCACGTTGCATGTGCACCCGACGAACGATCCCGCCACAGC
CCCCGCTATCATTCCCCTCCCCTCGAAGCCCTTCTCCATGTCTCTTACCG
CTACGAAGCTCGTTGTCGCAATGGCTTCCCGCGCCCTACACATCTACGAT
CTGAAAGCATTGGCTATGCTCACCGCTCAGTCGGAGGGTACGGTCCCCAA
CAAGATTGAAATCGAACCCTGGCAGCGAAGGGAGAGCAGCTTGAAGTTCA
TGACTCGCTCAGTGGCATGCATGCCCGACGATGCAGGATACGCGTCATCC
AGCATCGAGGGCCGTGTCGCGGTCGAATGGTTCGATCCGTCTGCTGAGTC
GCAAGCCCGCAAATATGCCTTCAAGTGTCACAGACAGACGGCGGATGATG
TCGACGTCGTTTACCCTGTCAATGCGCTTGCGTTCCACCCGGTCCACGGT
ACGTTTGCTTCGGGCGGTGGTGATGGAGTGGTTGCGCTTTGGGACGGTAT
TGCGAAGAGGAGAATCAGACAGTATCAGAAGTATCCGTCGAGTGTGGCTG
CTGTGGACTTTAGCGGTAACGGAAAGTACCTGGCGATCGCGATTAGTCCG
GGCTTCGAGGATGGAAAAGATGATGTTGTCGAAGGGACGGTTAAGATCTT
TGTACGTGAGCTTGGAGAGACGGAGGCGAAGGGGAAGGGCGCCAAATAAA
TCAATTCTCTGTCGCATCCCCGCCGACGGATGCTATCTCCGCCTTGAAGT
TCTCGCCCGACCCCGACTCCACGCGAATCGTTGTTTCTTCCTGGGATAAG
AACGTGTATCTGTACGACTTGCGCGATGAAAATGGTACCGTCGGAGAAGG
CAAGCTGTTACAGAAGTTTGAGCATCGCGCTCCGGTGTTGGATGTGTGTT
TCGGCGCAACCGAGGATGAGATCTACACGGCTGGCTTGGATTGGGACGTC
AAGAAATGGCGTCAAAATTGATGTAGCATCATCCACCCAGACCGTCCTCA
GCAGCCACGAAGCTGGTGTTCGAAGCGTCGTTTTCAGCAAGGAACACAAC
CTAGTAATATCCGCCTCTTGGGACTCCACGTTGCATGTGCACCCGACGAA
CGATCCCGCCACAGCCCCCGCTATCATTCCCCTCCCCTCGAAGCCCTTCT
CCATGTCTCTTACCGCTACGAAGCTCGTTGTCGCAATGGCTTCCCGCGCC
CTACACATCTACGATCTGAAAGCATTGGCTATGCTCACCGCTCAGTCGGA
GGGTACGGTCCCCAACAAGATTGAAATCGAACCCTGGCAGCGAAGGGAGA
GCAGCTTGAAGTTCATGACTCGCTCAGTGGCATGCATGCCCGACGATGCA
GGATACGCGTCATCCAGCATCGAGGGCCGTGTCGCGGTCGAATGGTTCGA
TCCGTCTGCTGAGTCGCAAGCCCGCAAATATGCCTTCAAGTGTCACAGAC
AGACGGCGGATGATGTCGACGTCGTTTACCCTGTCAATGCGCTTGCGTTC
CACCCGGTCCACGGTACGTTTGCTTCGGGCGGTGGTGATGGAGTGGTTGC
GCTTTGGGACGGTATTGCGAAGAGGAGAATCAGACAGTATCAGAAGTATC
CGTCGAGTGTGGCTGCTGTGGACTTTAGCGGTAACGGAAAGTACCTGGCG
ATCGCGATTAGTCCGGGCTTCGAGGATGGAAAAGATGATGTTGTCGAAGG
GACGGTTAAGATCTTTGTACGTGAGCTTGGAGAGACGGAGGCGAAGGGGA
AGGGCGCCAAATAAATCAATTCTCTGTCGCATCCCCGCCGACGGATGCTA
TCTCCGCCTTGAAGTTCTCGCCCGACCCCGACTCCACGCGAATCGTTGTT
TCTTCCTGGGATAAGAACGTGTATCTGTACGACTTGCGCGATGAAAATGG
TACCGTCGGAGAAGGCAAGCTGTTACAGAAGTTTGAGCATCGCGCTCCGG
TGTTGGATGTGTGTTTCGGCGCAACCGAGGATGAGATCTACACGGCTGGC
TTGGATTGGGACGTCAAGAAATGGCGTCAAAATTGATGTAGCATCATCCA
CCCAGACCGTCCTCAGCAGCCACGAAGCTGGTGTTCGAAGCGTCGTTTTC
AGCAAGGAACACAACCTAGTAATATCCGCCTCTTGGGACTCCACGTTGCA
TGTGCACCCGACGAACGATCCCGCCACAGCCCCCGCTATCATTCCCCTCC
CCTCGAAGCCCTTCTCCATGTCTCTTACCGCTACGAAGCTCGTTGTCGCA
ATGGCTTCCCGCGCCCTACACATCTACGATCTGAAAGCATTGGCTATGCT
CACCGCTCAGTCGGAGGGTACGGTCCCCAACAAGATTGAAATCGAACCCT
GGCAGCGAAGGGAGAGCAGCTTGAAGTTCATGACTCGCTCAGTGGCATGC
ATGCCCGACGATGCAGGATACGCGTCATCCAGCATCGAGGGCCGTGTCGC
GGTCGAATGGTTCGATCCGTCTGCTGAGTCGCAAGCCCGCAAATATGCCT
TCAAGTGTCACAGACAGACGGCGGATGATGTCGACGTCGTTTACCCTGTC
AATGCGCTTGCGTTCCACCCGGTCCACGGTACGTTTGCTTCGGGCGGTGG
TGATGGAGTGGTTGCGCTTTGGGACGGTATTGCGAAGAGGAGAATCAGAC
AGTATCAGAAGTATCCGTCGAGTGTGGCTGCTGTGGACTTTAGCGGTAAC
GGAAAGTACCTGGCGATCGCGATTAGTCCGGGCTTCGAGGATGGAAAAGA
TGATGTTGTCGAAGGGACGGTTAAGATCTTTGTACGTGAGCTTGGAGAGA
CGGAGGCGAAGGGGAAGGGCGCCAAATAAATCAATTCTCTGTCGCATCCC
CGCCGACGGATGCTATCTCCGCCTTGAAGTTCTCGCCCGACCCCGACTCC
ACGCGAATCGTTGTTTCTTCCTGGGATAAGAACGTGTATCTGTACGACTT
GCGCGATGAAAATGGTACCGTCGGAGAAGGCAAGCTGTTACAGAAGTTTG
AGCATCGCGCTCCGGTGTTGGATGTGTGTTTCGGCGCAACCGAGGATGAG
ATCTACACGGCTGGCTTGGATTGGGACGTCAAGAAATGGCGTCAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_87400ATCC64974_87400Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_87400-T1ATCC64974_87400-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_87400-T1.cdsATCC64974_87400-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_87400-T1.exon3ATCC64974_87400-T1.exon3Aspergillus niger N402exon
ATCC64974_87400-T1.exon2ATCC64974_87400-T1.exon2Aspergillus niger N402exon
ATCC64974_87400-T1.exon1ATCC64974_87400-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:187852..189045 -
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