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ATCC64974_88350-T1, ATCC64974_88350-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_88350-T1
Unique NameATCC64974_88350-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:477574..478523+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_88350-T1 ID=ATCC64974_88350-T1|Name=ATCC64974_88350-T1|organism=Aspergillus niger N402|type=mRNA|length=950bp|location=Sequence derived from alignment at OGUI01000016.1:477574..478523+ (Aspergillus niger N402)
ATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGGATGTTCTG
GTAAGTGGGCCGCCGTCCCAATAAGTAATCGCTTTTTCTCCGGGAATGGT
TCCCCCCTCCTCGGCCCGTCCCCGCAGATAAGGAATCATTCGATTTGCTA
AGATGATATATTTCGCACCCGCAGGGCGACAGAGATGGATGTCACCATGA
TTGGTCTCCAGAATGCAGGAAAGTCTTCGTTGTTGCGCGTGCTTGCGGTA
TGTCTTTTCACCCCCACGGCAACTGAACATCTTCCCGTGTTATCGGTCCT
CGGCGCTAATCCCGCAGTATAGGGCGGCGAGTTCACTGTAGAGTAAGTCT
CCATCGTGTAGGGCCTGGCCTGACTGCGCGACACTGGGTTGTCTGGCTAA
ACCTTGTTTCAGTTCTATTCCCACGATCGGGTTCAACACGAAACGAGTCC
AAAAGGGCCATGTGACTCTCAAATGGTTGGTGACCCAGAGCTGAGCCTTG
AGACGCCTGTGCGCAATCAATGTATCTAATATCCATCCAGCTGGGATCTA
GGTGGACAGCCACGGTTTCGACCGATGTGGGAGCGATACTGTCGGGGAGT
AAATGCGATCGTGTAAGTGCCTCGACTTTGTCTGACACAGGTCTCGGTAT
CCTAGCAGCGCTAACAACCCGACCAGATACATTGTGGATGCAGCAGATCG
GGCTGCCTTACCCGTAGCCAAGGAGGAATTGCATGAGCTAATGGGCAAAG
AGACGCTCAATGGGATTCCGCTGTTGGTCCTCGGGAATAAGTCCGACCTT
CCGGAGAAGCTGTCGGTCGACGACCTGATCCACGAGATGGACCTGAAATC
CATCACTCATCGCGAAGTGAGCTGTTATGGGATCAGCGCTAAAGAGGAGA
CAAACCTCGATGCTGTTCTGCATTGGTTAATTGCTCGAGCCAGTCGATGA
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Coding sequence (CDS) from alignment at OGUI01000016.1:477574..478523+

>ATCC64974_88350-T1 ID=ATCC64974_88350-T1|Name=ATCC64974_88350-T1|organism=Aspergillus niger N402|type=CDS|length=3312bp|location=Sequence derived from alignment at OGUI01000016.1:477574..478523+ (Aspergillus niger N402)
ATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGGATGTTCTG
GGCGACAGAGATGGATGTCACCATGATTGGTCTCCAGAATGCAGGAAAGT
CTTCGTTGTTGCGCGTGCTTGCGGGCGGCGAGTTCACTGTAGATTCTATT
CCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGCCATGTGACTCT
CAAATGCTGGGATCTAGGTGGACAGCCACGGTTTCGACCGATGTGGGAGC
GATACTGTCGGGGAGTAAATGCGATCGTATACATTGTGGATGCAGCAGAT
CGGGCTGCCTTACCCGTAGCCAAGGAGGAATTGCATGAGCTAATGGGCAA
AGAGACGCTCAATGGGATTCCGCTGTTGGTCCTCGGGAATAAGTCCGACC
TTCCGGAGAAGCTGTCGGTCGACGACCTGATCCACGAGATGGACCTGAAA
TCCATCACTCATCGCGAAGTGAGCTGTTATGGGATCAGCGCTAAAGAGGA
GACAAACCTCGATGCTGTTCTGCATTGGTTAATTGCTCGAGCCAGTCGAT
GAATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGGATGTTC
TGGGCGACAGAGATGGATGTCACCATGATTGGTCTCCAGAATGCAGGAAA
GTCTTCGTTGTTGCGCGTGCTTGCGGGCGGCGAGTTCACTGTAGATTCTA
TTCCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGCCATGTGACT
CTCAAATGCTGGGATCTAGGTGGACAGCCACGGTTTCGACCGATGTGGGA
GCGATACTGTCGGGGAGTAAATGCGATCGTATACATTGTGGATGCAGCAG
ATCGGGCTGCCTTACCCGTAGCCAAGGAGGAATTGCATGAGCTAATGGGC
AAAGAGACGCTCAATGGGATTCCGCTGTTGGTCCTCGGGAATAAGTCCGA
CCTTCCGGAGAAGCTGTCGGTCGACGACCTGATCCACGAGATGGACCTGA
AATCCATCACTCATCGCGAAGTGAGCTGTTATGGGATCAGCGCTAAAGAG
GAGACAAACCTCGATGCTGTTCTGCATTGGTTAATTGCTCGAGCCAGTCG
ATGAATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGGATGT
TCTGGGCGACAGAGATGGATGTCACCATGATTGGTCTCCAGAATGCAGGA
AAGTCTTCGTTGTTGCGCGTGCTTGCGGGCGGCGAGTTCACTGTAGATTC
TATTCCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGCCATGTGA
CTCTCAAATGCTGGGATCTAGGTGGACAGCCACGGTTTCGACCGATGTGG
GAGCGATACTGTCGGGGAGTAAATGCGATCGTATACATTGTGGATGCAGC
AGATCGGGCTGCCTTACCCGTAGCCAAGGAGGAATTGCATGAGCTAATGG
GCAAAGAGACGCTCAATGGGATTCCGCTGTTGGTCCTCGGGAATAAGTCC
GACCTTCCGGAGAAGCTGTCGGTCGACGACCTGATCCACGAGATGGACCT
GAAATCCATCACTCATCGCGAAGTGAGCTGTTATGGGATCAGCGCTAAAG
AGGAGACAAACCTCGATGCTGTTCTGCATTGGTTAATTGCTCGAGCCAGT
CGATGAATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGGAT
GTTCTGGGCGACAGAGATGGATGTCACCATGATTGGTCTCCAGAATGCAG
GAAAGTCTTCGTTGTTGCGCGTGCTTGCGGGCGGCGAGTTCACTGTAGAT
TCTATTCCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGCCATGT
GACTCTCAAATGCTGGGATCTAGGTGGACAGCCACGGTTTCGACCGATGT
GGGAGCGATACTGTCGGGGAGTAAATGCGATCGTATACATTGTGGATGCA
GCAGATCGGGCTGCCTTACCCGTAGCCAAGGAGGAATTGCATGAGCTAAT
GGGCAAAGAGACGCTCAATGGGATTCCGCTGTTGGTCCTCGGGAATAAGT
CCGACCTTCCGGAGAAGCTGTCGGTCGACGACCTGATCCACGAGATGGAC
CTGAAATCCATCACTCATCGCGAAGTGAGCTGTTATGGGATCAGCGCTAA
AGAGGAGACAAACCTCGATGCTGTTCTGCATTGGTTAATTGCTCGAGCCA
GTCGATGAATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGG
ATGTTCTGGGCGACAGAGATGGATGTCACCATGATTGGTCTCCAGAATGC
AGGAAAGTCTTCGTTGTTGCGCGTGCTTGCGGGCGGCGAGTTCACTGTAG
ATTCTATTCCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGCCAT
GTGACTCTCAAATGCTGGGATCTAGGTGGACAGCCACGGTTTCGACCGAT
GTGGGAGCGATACTGTCGGGGAGTAAATGCGATCGTATACATTGTGGATG
CAGCAGATCGGGCTGCCTTACCCGTAGCCAAGGAGGAATTGCATGAGCTA
ATGGGCAAAGAGACGCTCAATGGGATTCCGCTGTTGGTCCTCGGGAATAA
GTCCGACCTTCCGGAGAAGCTGTCGGTCGACGACCTGATCCACGAGATGG
ACCTGAAATCCATCACTCATCGCGAAGTGAGCTGTTATGGGATCAGCGCT
AAAGAGGAGACAAACCTCGATGCTGTTCTGCATTGGTTAATTGCTCGAGC
CAGTCGATGAATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGA
GGATGTTCTGGGCGACAGAGATGGATGTCACCATGATTGGTCTCCAGAAT
GCAGGAAAGTCTTCGTTGTTGCGCGTGCTTGCGGGCGGCGAGTTCACTGT
AGATTCTATTCCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGCC
ATGTGACTCTCAAATGCTGGGATCTAGGTGGACAGCCACGGTTTCGACCG
ATGTGGGAGCGATACTGTCGGGGAGTAAATGCGATCGTATACATTGTGGA
TGCAGCAGATCGGGCTGCCTTACCCGTAGCCAAGGAGGAATTGCATGAGC
TAATGGGCAAAGAGACGCTCAATGGGATTCCGCTGTTGGTCCTCGGGAAT
AAGTCCGACCTTCCGGAGAAGCTGTCGGTCGACGACCTGATCCACGAGAT
GGACCTGAAATCCATCACTCATCGCGAAGTGAGCTGTTATGGGATCAGCG
CTAAAGAGGAGACAAACCTCGATGCTGTTCTGCATTGGTTAATTGCTCGA
GCCAGTCGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_88350ATCC64974_88350Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88350-T1ATCC64974_88350-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88350-T1.exon1ATCC64974_88350-T1.exon1Aspergillus niger N402exon
ATCC64974_88350-T1.exon2ATCC64974_88350-T1.exon2Aspergillus niger N402exon
ATCC64974_88350-T1.exon3ATCC64974_88350-T1.exon3Aspergillus niger N402exon
ATCC64974_88350-T1.exon4ATCC64974_88350-T1.exon4Aspergillus niger N402exon
ATCC64974_88350-T1.exon5ATCC64974_88350-T1.exon5Aspergillus niger N402exon
ATCC64974_88350-T1.exon6ATCC64974_88350-T1.exon6Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88350-T1.cdsATCC64974_88350-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR006689
DBxrefPFAM:PF09439
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:477574..478523 +
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