You are here

Home

ATCC64974_88480-T1, ATCC64974_88480-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_88480-T1
Unique NameATCC64974_88480-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:523548..524425-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_88480-T1 ID=ATCC64974_88480-T1|Name=ATCC64974_88480-T1|organism=Aspergillus niger N402|type=mRNA|length=878bp|location=Sequence derived from alignment at OGUI01000016.1:523548..524425- (Aspergillus niger N402)
ATGGGAGATTACGGCCCCGGAGTGTCGTCACTCACGGCACAGCTACCTGG
AAATCCGCCTGTCTCTGAAACAGATCAGGATGAGATCTCAGTACTTGTAA
CGGGCTTTGGGGTAAGCTTCCAGTGTCCATACCATTCTCCCAATATCGCA
ACTCACATGTTCTACAGCCATTCAAGTCTAATCTAGTGAACGCCTCATAT
CTGATAGCCTCGTCCCTACCACCCTCTTTCACATTCTCACCTGCATCTTC
AGACGGCTCTGATGCTGTTCCCCGTCGAGTTTCGATGTATGTCCATCCTT
CACCCATACCCGTTGCATATTCATCGGTGCGGACGACCCTCCCCGTCATT
CTCGATGACTATGCCAAGACGCACGGAGGCCGACGCCCAGACATTGTCAT
ACACATTGGCATAGCAGCAATGAGGAACTACTATTCCGTGGAGACGCAGG
CTCACCGTGATGGGTATCTGATGTCCGACATCAAAGGCAGATCCGGGTAC
GAGGATGGCGAGAAGCTGTGGAGGGAGCTCGACTTGCCACTGGTGCTTAG
GGCTGGCCCTTCAGAGGGACACGCCTCGGAGAAGAAACATCTCAGCCCCC
GTCCACCGGACGAAGATTTCCTAGCAGCATGGAAGACATTTTGCCCTCCA
GAAACCGATGCGCGGATCTCCACTGATGCCGGACGTTATCTCTGCGAGTT
CATCCTGTACACCAGCTTGGCACTGGCATACCAGGCGGGTGAGGATCGCA
ATGTCACCTTCTTCCATGTTCCCGCGTCATGCTTGGATGAGGATATAGAG
ACGGGCAAGGAGGTTGCCGTCGCGCTAATCAAGGCTCTTGTGACTAGCTG
GAGTGAGCAGCAGCACAGCGTTCCCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:523548..524425-

>ATCC64974_88480-T1 ID=ATCC64974_88480-T1|Name=ATCC64974_88480-T1|organism=Aspergillus niger N402|type=CDS|length=1644bp|location=Sequence derived from alignment at OGUI01000016.1:523548..524425- (Aspergillus niger N402)
CCATTCAAGTCTAATCTAGTGAACGCCTCATATCTGATAGCCTCGTCCCT
ACCACCCTCTTTCACATTCTCACCTGCATCTTCAGACGGCTCTGATGCTG
TTCCCCGTCGAGTTTCGATGTATGTCCATCCTTCACCCATACCCGTTGCA
TATTCATCGGTGCGGACGACCCTCCCCGTCATTCTCGATGACTATGCCAA
GACGCACGGAGGCCGACGCCCAGACATTGTCATACACATTGGCATAGCAG
CAATGAGGAACTACTATTCCGTGGAGACGCAGGCTCACCGTGATGGGTAT
CTGATGTCCGACATCAAAGGCAGATCCGGGTACGAGGATGGCGAGAAGCT
GTGGAGGGAGCTCGACTTGCCACTGGTGCTTAGGGCTGGCCCTTCAGAGG
GACACGCCTCGGAGAAGAAACATCTCAGCCCCCGTCCACCGGACGAAGAT
TTCCTAGCAGCATGGAAGACATTTTGCCCTCCAGAAACCGATGCGCGGAT
CTCCACTGATGCCGGACGTTATCTCTGCGAGTTCATCCTGTACACCAGCT
TGGCACTGGCATACCAGGCGGGTGAGGATCGCAATGTCACCTTCTTCCAT
GTTCCCGCGTCATGCTTGGATGAGGATATAGAGACGGGCAAGGAGGTTGC
CGTCGCGCTAATCAAGGCTCTTGTGACTAGCTGGAGTGAGCAGCAGCACA
GCGTTCCCTAGATGGGAGATTACGGCCCCGGAGTGTCGTCACTCACGGCA
CAGCTACCTGGAAATCCGCCTGTCTCTGAAACAGATCAGGATGAGATCTC
AGTACTTGTAACGGGCTTTGGGCCATTCAAGTCTAATCTAGTGAACGCCT
CATATCTGATAGCCTCGTCCCTACCACCCTCTTTCACATTCTCACCTGCA
TCTTCAGACGGCTCTGATGCTGTTCCCCGTCGAGTTTCGATGTATGTCCA
TCCTTCACCCATACCCGTTGCATATTCATCGGTGCGGACGACCCTCCCCG
TCATTCTCGATGACTATGCCAAGACGCACGGAGGCCGACGCCCAGACATT
GTCATACACATTGGCATAGCAGCAATGAGGAACTACTATTCCGTGGAGAC
GCAGGCTCACCGTGATGGGTATCTGATGTCCGACATCAAAGGCAGATCCG
GGTACGAGGATGGCGAGAAGCTGTGGAGGGAGCTCGACTTGCCACTGGTG
CTTAGGGCTGGCCCTTCAGAGGGACACGCCTCGGAGAAGAAACATCTCAG
CCCCCGTCCACCGGACGAAGATTTCCTAGCAGCATGGAAGACATTTTGCC
CTCCAGAAACCGATGCGCGGATCTCCACTGATGCCGGACGTTATCTCTGC
GAGTTCATCCTGTACACCAGCTTGGCACTGGCATACCAGGCGGGTGAGGA
TCGCAATGTCACCTTCTTCCATGTTCCCGCGTCATGCTTGGATGAGGATA
TAGAGACGGGCAAGGAGGTTGCCGTCGCGCTAATCAAGGCTCTTGTGACT
AGCTGGAGTGAGCAGCAGCACAGCGTTCCCTAGATGGGAGATTACGGCCC
CGGAGTGTCGTCACTCACGGCACAGCTACCTGGAAATCCGCCTGTCTCTG
AAACAGATCAGGATGAGATCTCAGTACTTGTAACGGGCTTTGGG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_88480ATCC64974_88480Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88480-T1ATCC64974_88480-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88480-T1.cdsATCC64974_88480-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88480-T1.exon2ATCC64974_88480-T1.exon2Aspergillus niger N402exon
ATCC64974_88480-T1.exon1ATCC64974_88480-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteMEROPS:MER0011032
DBxrefInterPro:IPR036440
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:523548..524425 -
Powered by Drupal