You are here

Home

ATCC64974_88990-T1, ATCC64974_88990-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_88990-T1
Unique NameATCC64974_88990-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:698603..699518-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_88990-T1 ID=ATCC64974_88990-T1|Name=ATCC64974_88990-T1|organism=Aspergillus niger N402|type=mRNA|length=916bp|location=Sequence derived from alignment at OGUI01000016.1:698603..699518- (Aspergillus niger N402)
ATGGTCGCAGACGCTTTAGTTTACCATCCCGCCTTGGCGCACTACCTGCG
CTTTGTCGCAACGACCGGTACGTGCCGGCTTTCTATCTGTCCTGCGCTGC
TGGTTTCTCGGCCGGGAGAGAGCAATATGCCCCAATGCAGGGGAGATGTC
TCTCGTGCTTCTGCAGGATACACTTGATCACATTCCAGCATATCACTAAT
ATCTCTCAGTCGGTCGCGATAAGATCCTTCGAACCCTGCAGTACTTCTCC
CGCTTCTATGCTTGGTACCTCTACCGCACCAACCGCCCCCAGTCCGCCAT
CGAGCCTTTCAACGCTGTCAAGAAGCAGTTCGGAACAACTCGGAAGATTC
TGCGGATCGGCAAGTTTGTTGAGCATCTGAAGGCAGCCGCATTGGCCTCC
GACAACAAGAACCCTATCGACCCTGTACTCCGTTATCTCGCCGTCGGCCG
TCAGCTTGGCTACGCGGGCTACCTCTCTCTCGATACAGTCACCGTTATTG
ACACGATCGGTGTTCGTAAGCTTGCTTCGGCCAAGCGACTGCAGGAGCAC
GCTTACCGTTCATGGATGGCGGGCTTGGTCTGCAGCGCTGTCGCGGGCGT
ATACACTCTGTTCAGGTTGCGGGAGAAGGAGAAGACCCTCGACCGCAAGG
AAGGCGAAGGTGTTGTGGAGGCCAAGAAGCTTGAGAAGTATGTTTTATGT
TCTTTGGCCCAATCTACTCGCGCTGGGTCAGTATACTAACATTGTATTTG
CAGGGAGCGTTCTGCCGCACGCATTCAGCTCATTTCCGACCTTTGTGACC
TGAGCGTGCCAGTGTCCGCCCTCGGACTGGCATCTCTCGATGACGGCATC
GTGGGTCTTGCAGGAACGGTCAGCAGTTTGATCGGTATCTGGTCCCAGTG
GCGGAAGACTGCGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:698603..699518-

>ATCC64974_88990-T1 ID=ATCC64974_88990-T1|Name=ATCC64974_88990-T1|organism=Aspergillus niger N402|type=CDS|length=2124bp|location=Sequence derived from alignment at OGUI01000016.1:698603..699518- (Aspergillus niger N402)
GGAGCGTTCTGCCGCACGCATTCAGCTCATTTCCGACCTTTGTGACCTGA
GCGTGCCAGTGTCCGCCCTCGGACTGGCATCTCTCGATGACGGCATCGTG
GGTCTTGCAGGAACGGTCAGCAGTTTGATCGGTATCTGGTCCCAGTGGCG
GAAGACTGCGTAATCGGTCGCGATAAGATCCTTCGAACCCTGCAGTACTT
CTCCCGCTTCTATGCTTGGTACCTCTACCGCACCAACCGCCCCCAGTCCG
CCATCGAGCCTTTCAACGCTGTCAAGAAGCAGTTCGGAACAACTCGGAAG
ATTCTGCGGATCGGCAAGTTTGTTGAGCATCTGAAGGCAGCCGCATTGGC
CTCCGACAACAAGAACCCTATCGACCCTGTACTCCGTTATCTCGCCGTCG
GCCGTCAGCTTGGCTACGCGGGCTACCTCTCTCTCGATACAGTCACCGTT
ATTGACACGATCGGTGTTCGTAAGCTTGCTTCGGCCAAGCGACTGCAGGA
GCACGCTTACCGTTCATGGATGGCGGGCTTGGTCTGCAGCGCTGTCGCGG
GCGTATACACTCTGTTCAGGTTGCGGGAGAAGGAGAAGACCCTCGACCGC
AAGGAAGGCGAAGGTGTTGTGGAGGCCAAGAAGCTTGAGAAATGGTCGCA
GACGCTTTAGTTTACCATCCCGCCTTGGCGCACTACCTGCGCTTTGTCGC
AACGACCGGGAGCGTTCTGCCGCACGCATTCAGCTCATTTCCGACCTTTG
TGACCTGAGCGTGCCAGTGTCCGCCCTCGGACTGGCATCTCTCGATGACG
GCATCGTGGGTCTTGCAGGAACGGTCAGCAGTTTGATCGGTATCTGGTCC
CAGTGGCGGAAGACTGCGTAATCGGTCGCGATAAGATCCTTCGAACCCTG
CAGTACTTCTCCCGCTTCTATGCTTGGTACCTCTACCGCACCAACCGCCC
CCAGTCCGCCATCGAGCCTTTCAACGCTGTCAAGAAGCAGTTCGGAACAA
CTCGGAAGATTCTGCGGATCGGCAAGTTTGTTGAGCATCTGAAGGCAGCC
GCATTGGCCTCCGACAACAAGAACCCTATCGACCCTGTACTCCGTTATCT
CGCCGTCGGCCGTCAGCTTGGCTACGCGGGCTACCTCTCTCTCGATACAG
TCACCGTTATTGACACGATCGGTGTTCGTAAGCTTGCTTCGGCCAAGCGA
CTGCAGGAGCACGCTTACCGTTCATGGATGGCGGGCTTGGTCTGCAGCGC
TGTCGCGGGCGTATACACTCTGTTCAGGTTGCGGGAGAAGGAGAAGACCC
TCGACCGCAAGGAAGGCGAAGGTGTTGTGGAGGCCAAGAAGCTTGAGAAA
TGGTCGCAGACGCTTTAGTTTACCATCCCGCCTTGGCGCACTACCTGCGC
TTTGTCGCAACGACCGGGAGCGTTCTGCCGCACGCATTCAGCTCATTTCC
GACCTTTGTGACCTGAGCGTGCCAGTGTCCGCCCTCGGACTGGCATCTCT
CGATGACGGCATCGTGGGTCTTGCAGGAACGGTCAGCAGTTTGATCGGTA
TCTGGTCCCAGTGGCGGAAGACTGCGTAATCGGTCGCGATAAGATCCTTC
GAACCCTGCAGTACTTCTCCCGCTTCTATGCTTGGTACCTCTACCGCACC
AACCGCCCCCAGTCCGCCATCGAGCCTTTCAACGCTGTCAAGAAGCAGTT
CGGAACAACTCGGAAGATTCTGCGGATCGGCAAGTTTGTTGAGCATCTGA
AGGCAGCCGCATTGGCCTCCGACAACAAGAACCCTATCGACCCTGTACTC
CGTTATCTCGCCGTCGGCCGTCAGCTTGGCTACGCGGGCTACCTCTCTCT
CGATACAGTCACCGTTATTGACACGATCGGTGTTCGTAAGCTTGCTTCGG
CCAAGCGACTGCAGGAGCACGCTTACCGTTCATGGATGGCGGGCTTGGTC
TGCAGCGCTGTCGCGGGCGTATACACTCTGTTCAGGTTGCGGGAGAAGGA
GAAGACCCTCGACCGCAAGGAAGGCGAAGGTGTTGTGGAGGCCAAGAAGC
TTGAGAAATGGTCGCAGACGCTTTAGTTTACCATCCCGCCTTGGCGCACT
ACCTGCGCTTTGTCGCAACGACCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005779integral component of peroxisomal membrane
Vocabulary: Biological Process
TermDefinition
GO:0016559peroxisome fission
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_88990ATCC64974_88990Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88990-T1ATCC64974_88990-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88990-T1.cdsATCC64974_88990-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88990-T1.exon3ATCC64974_88990-T1.exon3Aspergillus niger N402exon
ATCC64974_88990-T1.exon2ATCC64974_88990-T1.exon2Aspergillus niger N402exon
ATCC64974_88990-T1.exon1ATCC64974_88990-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG0926436T
DBxrefInterPro:IPR008733
DBxrefPFAM:PF05648
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:698603..699518 -
Powered by Drupal