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ATCC64974_9080-T1, ATCC64974_9080-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_9080-T1
Unique NameATCC64974_9080-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:516972..518690-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_9080-T1 ID=ATCC64974_9080-T1|Name=ATCC64974_9080-T1|organism=Aspergillus niger N402|type=mRNA|length=1719bp|location=Sequence derived from alignment at OGUI01000002.1:516972..518690- (Aspergillus niger N402)
ATGCAGTCCTTCCTTCAGTATCGACGTCTGCGCAGACACCTACACGAAAG
TATCAAGATACACGGCCCCGCTGCCGCTGGAGATCCTAATTCACAACCAT
CTGGTGACATCCTTGAAGACTATGAAGACGCTCGGCTCGACAGGCAACAT
TTAACGAACCGTCCAAGCGCTGCTGTCCCTTCCTCTTCTCGTAACTCCAT
CTCATCGCAAGGAATGCCTGGGGTGGTGCTGCAGAACGGGCGAAGAGTGA
CTGTGCCAGGTGTTAGCGTTCATTCTGCAACCGATGTTGAACTCACCAAC
GGGGAGGCTATCTTCATAGTGGGATTCGATGGCCCAGGCGACCCATTCAA
CCCGAAGAACTGGCCTGTGAGACAGAAATGGACGACGTTAGGTATTGTTG
GCACAACGGGCTTTCTTGTGGGGTGGGCTTCCTCGATCGATTCTGGAGTC
ATCAAACAGGGAGAAGAGGCGTTCGGGGTCAGTGAAGTGACTGAGTCTCT
TGCCACTGCGCTTTATCTAGTTGCATTCGGATTTGGATCTCTTGTGGCAG
CACCTTTCTCGGAAACTGTGGGACGCAACCCCGTCTACCTAGTGACCTTG
TCACTTCTTATGATTTTCATCATGGCCTCCGGTCTATCTCCAAATCTAGG
CGCCCAGTTGGCATTCCGTTTCATCGCTGGACTATTCGGATGCACGCCGC
TGACTACATTCGGTGGGAGTATGTCGGACATCTTCGACCTTCTAGATCGC
ACATATGCCTTTCCGGTGTGCTGTGCGTTGTCTTTCTTGGGGCCTTTCCT
CGCCCCAATGGTCGGTGCGTTCATTGGCCAAAGCTCTGTCATATCCTGGC
GTTGGTCAGAGTGGACATCTCTGATACTTGCTGGGCTTATTACGGCCTCT
ATCTTCTTCTTTGTACCCGAGACCTACGGGCCAGTACTTCTGCAGTGGAA
GGCTCGCCAACTACGCACCATCACCGGCGACCCTCGTTTCATGGCCGAGA
TCGAATTGCGCCAAACCACCCTACCCATCCGATTAATGCATAGCTGCTCG
CGCCCCTTCAAGCTATTCTTCCAGGAGATTATGGTAGCTCTTTTTACGAT
GTACTTGGTGGTCGTATACATCGTGCTTTTCGGCTTTCTAACGGGTTACG
AGTTCATATACGGTCGCACATATGGTTTCTCACAGGGCTCAGTGGGACTG
ACATATATTGGAATGAATGTGGGATTTTTGATTGCACTCGCCATTGTTCC
GCATGTCTACCTGTCTTATAAGAGACGACTCCAGACAGCCATCGCTAGCG
GCAAACCCAGTCTACCACCCGAAGAGCGACTCTGGTTCGCCATGTATGGC
GCACCGTGGCTTCCGATATCTCTTTTCTGGATGGGGTGGACCAGTTATCC
GTCCGTCTCGTACTGGTCACCTCTGATCGCATCTGTGGCGTTCGGGTTCT
CGGTGCAGGGCATTTTCATAAGCAGCTATCAGTATTTGATCGATACGTAT
GAGATATTTGCTGCTAGTGCTCTTGTGAGTGCGACATTCATGCGATATAT
CGCCGCAGGAGCTATGGTTATTGTGTCCATTCCAATGTACACTAACCTGG
GTGTTCATTGGTCGCTTACCCTGCTGGGATGTATCTCCCTACTGATGACG
CCGGTCCCATACATCTTCTATAGATTCGGACATGCTATTCGCCGAAGGAG
CAAGTCTGCCGCAGCATAG
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Coding sequence (CDS) from alignment at OGUI01000002.1:516972..518690-

>ATCC64974_9080-T1 ID=ATCC64974_9080-T1|Name=ATCC64974_9080-T1|organism=Aspergillus niger N402|type=CDS|length=1719bp|location=Sequence derived from alignment at OGUI01000002.1:516972..518690- (Aspergillus niger N402)
ATGCAGTCCTTCCTTCAGTATCGACGTCTGCGCAGACACCTACACGAAAG
TATCAAGATACACGGCCCCGCTGCCGCTGGAGATCCTAATTCACAACCAT
CTGGTGACATCCTTGAAGACTATGAAGACGCTCGGCTCGACAGGCAACAT
TTAACGAACCGTCCAAGCGCTGCTGTCCCTTCCTCTTCTCGTAACTCCAT
CTCATCGCAAGGAATGCCTGGGGTGGTGCTGCAGAACGGGCGAAGAGTGA
CTGTGCCAGGTGTTAGCGTTCATTCTGCAACCGATGTTGAACTCACCAAC
GGGGAGGCTATCTTCATAGTGGGATTCGATGGCCCAGGCGACCCATTCAA
CCCGAAGAACTGGCCTGTGAGACAGAAATGGACGACGTTAGGTATTGTTG
GCACAACGGGCTTTCTTGTGGGGTGGGCTTCCTCGATCGATTCTGGAGTC
ATCAAACAGGGAGAAGAGGCGTTCGGGGTCAGTGAAGTGACTGAGTCTCT
TGCCACTGCGCTTTATCTAGTTGCATTCGGATTTGGATCTCTTGTGGCAG
CACCTTTCTCGGAAACTGTGGGACGCAACCCCGTCTACCTAGTGACCTTG
TCACTTCTTATGATTTTCATCATGGCCTCCGGTCTATCTCCAAATCTAGG
CGCCCAGTTGGCATTCCGTTTCATCGCTGGACTATTCGGATGCACGCCGC
TGACTACATTCGGTGGGAGTATGTCGGACATCTTCGACCTTCTAGATCGC
ACATATGCCTTTCCGGTGTGCTGTGCGTTGTCTTTCTTGGGGCCTTTCCT
CGCCCCAATGGTCGGTGCGTTCATTGGCCAAAGCTCTGTCATATCCTGGC
GTTGGTCAGAGTGGACATCTCTGATACTTGCTGGGCTTATTACGGCCTCT
ATCTTCTTCTTTGTACCCGAGACCTACGGGCCAGTACTTCTGCAGTGGAA
GGCTCGCCAACTACGCACCATCACCGGCGACCCTCGTTTCATGGCCGAGA
TCGAATTGCGCCAAACCACCCTACCCATCCGATTAATGCATAGCTGCTCG
CGCCCCTTCAAGCTATTCTTCCAGGAGATTATGGTAGCTCTTTTTACGAT
GTACTTGGTGGTCGTATACATCGTGCTTTTCGGCTTTCTAACGGGTTACG
AGTTCATATACGGTCGCACATATGGTTTCTCACAGGGCTCAGTGGGACTG
ACATATATTGGAATGAATGTGGGATTTTTGATTGCACTCGCCATTGTTCC
GCATGTCTACCTGTCTTATAAGAGACGACTCCAGACAGCCATCGCTAGCG
GCAAACCCAGTCTACCACCCGAAGAGCGACTCTGGTTCGCCATGTATGGC
GCACCGTGGCTTCCGATATCTCTTTTCTGGATGGGGTGGACCAGTTATCC
GTCCGTCTCGTACTGGTCACCTCTGATCGCATCTGTGGCGTTCGGGTTCT
CGGTGCAGGGCATTTTCATAAGCAGCTATCAGTATTTGATCGATACGTAT
GAGATATTTGCTGCTAGTGCTCTTGTGAGTGCGACATTCATGCGATATAT
CGCCGCAGGAGCTATGGTTATTGTGTCCATTCCAATGTACACTAACCTGG
GTGTTCATTGGTCGCTTACCCTGCTGGGATGTATCTCCCTACTGATGACG
CCGGTCCCATACATCTTCTATAGATTCGGACATGCTATTCGCCGAAGGAG
CAAGTCTGCCGCAGCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_9080ATCC64974_9080Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9080-T1.cdsATCC64974_9080-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9080-T1.exon1ATCC64974_9080-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9080-T1ATCC64974_9080-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000021.5
NoteEggNog:ENOG41
NoteSMCOG1169:sugar transport protein
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:516972..518690 -
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